Oncorhynchus nerka (sockeye salmon): 115106696
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Entry
115106696 CDS
T07952
Name
(RefSeq) transforming growth factor beta-2 proprotein-like
KO
K13376
transforming growth factor beta-2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04010
MAPK signaling pathway
one04060
Cytokine-cytokine receptor interaction
one04068
FoxO signaling pathway
one04110
Cell cycle
one04218
Cellular senescence
one04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
115106696
04350 TGF-beta signaling pathway
115106696
04068 FoxO signaling pathway
115106696
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
115106696
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
115106696
04218 Cellular senescence
115106696
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
one04052
]
115106696
00536 Glycosaminoglycan binding proteins [BR:
one00536
]
115106696
Cytokines and neuropeptides [BR:
one04052
]
Cytokines
Transforming growth factors (RSTK binding)
115106696
Glycosaminoglycan binding proteins [BR:
one00536
]
Heparan sulfate / Heparin
Growth factors/receptors
115106696
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Paralog
Gene cluster
GFIT
Motif
Pfam:
TGFb_propeptide
TGF_beta
Beta-prop_RIG_2nd
CBM96
Motif
Other DBs
NCBI-GeneID:
115106696
NCBI-ProteinID:
XP_029485544
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Position
LG3:complement(21323405..21357055)
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AA seq
411 aa
AA seq
DB search
MNYCVLSLLLTMDLATVAVSLSTCSTLDMDQFMKKRIEAIRGQILSKLKLTSPPETYPKP
EEVSRDIIAIYNSTRDLLQEKANDRAATCERQRSEEEYYAKEVHKIDMQPPYPSENVISP
THYNPYYRRLTFDVTSMEKNASNLVKAELRVFRLQNPKARVSEQRIEMYQILSHKDLASP
TQRYIDSKVVRTRTEGEWLSFDVTEAVSEWLLHRDRNSGFKISLHCPCCTFVPSNNYIIP
NKSEELETRFAGIDDSFHHSGDLKVYRKRRHSAQAPHLLMMLLPSYRLESQHKSHRSKRA
LDAAFCSRNVQDNCCLRSLYIDFKKDLGWRWIHEPKGYNANFCAGACPYLWSADTQHSKV
LGLYNTINPEASASPCCVSQDLEPLTILYYIGKTPKIEQLSNMIVKSCKCS
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgaactactgcgttttaagtcttctcctgaccatggatttagccactgtggccgtcagt
ttgtctacatgcagtacgctggacatggatcagtttatgaaaaagcgcatagaagccatc
cgtggacagatactgagcaagttgaagctcacgagccccccggagacatatcccaagccc
gaggaggtgtcgcgggatatcatcgccatctataacagcacgagagacctgttgcaggag
aaagccaacgatcgggcggcgacgtgtgagcgccaacgaagcgaggaggagtactacgca
aaagaggttcacaaaatcgacatgcaacccccctacccctctgagaatgttatctctccc
acgcactacaacccgtactacagacggctcaccttcgacgtgacctccatggagaagaat
gcctctaacctggtcaaggctgagctacgagtcttccgcctccagaaccccaaggcccgc
gtgtctgaacagaggattgaaatgtaccagattttgagtcacaaggacctggcatccccg
acgcagcgctacattgacagcaaggtggtgcgcacgcgcacggaaggggagtggctgtct
tttgacgtgacagaggcagtcagtgaatggttgcttcatagagacagaaacagtggattc
aagatcagcttgcactgtccgtgctgtacgtttgtgccctcaaacaactacatcatcccc
aataagagtgaggagctggaaacccgctttgcaggtatagatgacagcttccaccacagc
ggagacctgaaggtgtatcggaagcggcgccacagcgcccaggctccacacctgctcatg
atgctgctgccctcctaccgcctagagtcccagcacaagagccaccgctccaaacgagcc
ctggatgctgccttctgctccagaaatgtccaggataactgctgcttgcggtcgctctac
atcgacttcaagaaagatctgggctggaggtggatccatgagcccaagggctacaatgct
aatttctgcgccggggcctgtccctatctatggagcgctgacacccagcattccaaggtg
ctaggcctgtacaacaccatcaacccggaggcgtcagcatcgccctgctgtgtgtctcag
gatctggaacctctcaccatcctctactacatcggcaagacccccaagatagagcagctc
tccaacatgatcgtcaagtcctgcaagtgcagctag
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