Oncorhynchus nerka (sockeye salmon): 115106705
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Entry
115106705 CDS
T07952
Symbol
dcaf7
Name
(RefSeq) LOW QUALITY PROTEIN: DDB1- and CUL4-associated factor 7
KO
K11805
DDB1- and CUL4-associated factor 7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115106705 (dcaf7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115106705 (dcaf7)
03036 Chromosome and associated proteins [BR:
one03036
]
115106705 (dcaf7)
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
115106705 (dcaf7)
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.3/1.5)
115106705 (dcaf7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EIPR1
Beta-prop_RIG_2nd
Beta-prop_WDR3_1st
WD40
Beta-prop_Aladin
WD40_WDHD1_1st
Beta-prop_WDR36-Utp21_2nd
WD40_RFWD3
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
MIOS_WD40
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
WD40_Gbeta
EIF3I
WDR55
Beta-prop_WDR41
WD_LRWD1
WD40_MABP1-WDR62_2nd
Reductase_C
Motif
Other DBs
NCBI-GeneID:
115106705
NCBI-ProteinID:
XP_029485553
LinkDB
All DBs
Position
LG23:complement(19033310..19054404)
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AA seq
342 aa
AA seq
DB search
MSLHGKRKEIYKYEAPWTVYAMNWSVRPDKRFRLALGSFVEEYNNKVQIVGLEEESSEFV
CRNTFDHPYPTTKIMWIPDTKGVYPDLLATSGDYLRIWRVSDTETRLECLLNNNKNSDFC
APLTSFDWNEVDPNLLGTSSIDTTCTIWGLETGQVLGRVNLVSGHVKTQLIAHDKEVYDI
AFSRAGGGRDMFASVGADGSVRMFDLRHLEHSTIIYEDPQHHPLLRLCWNKQDPNYLATM
AMDGMEVVILDVRVPCTPVARLNNHRACVNGIAWAPHSSCHICTAADDHQALIWDIQQMP
RAIEDPILAYTAEGEINNVQWASTQPDWIAICYNNCLEILRV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcttcacggtaagcgcaaagaaatttacaaatacgaggcgccatggacggtatat
gcaatgaattggagtgtgcgaccagacaagcgctttcgtctcgctcttggcagctttgtc
gaggagtacaataacaaggttcagatagttggattggaggaggagagctcagagtttgtc
tgccggaacacattcgaccacccttaccccaccacaaaaattatgtggattcctgacacc
aagggggtgtatcctgacctgctggctaccagtggagactacctgcgcatttggagggtg
agtgacactgagactcgtctggaatgcctgctcaacaacaacaaaaactctgacttctgt
gcaccgctgacatcctttgactggaatgaggtggaccctaacctgctgggtacctccagt
attgacaccacctgcactatctggggcctggagacaggtcaggtactgggcagggtcaac
ctggtgtctggccatgtcaagactcagctcatcgcccatgacaaagaggtctatgacatc
gcattcagccgagccggtggtggccgggacatgtttgcgtcggtgggggcagatgggtct
gtgcgcatgtttgacttgcgccacttggagcacagcaccatcatctacgaggacccccag
caccacccgctgctccgcctctgctggaacaaacaagaccccaactacctggccaccatg
gcgatggatggaatggaggtggtgatcttagacgtccgtgtgccatgcaccccagtggcc
agacttaacaaccaccgcgcctgtgtcaacggcatcgcctgggcgccccactcatcctgc
cacatttgtacagcagcggatgaccatcaggcgctgatctgggacatccagcagatgccc
agagccatcgaggaccccatcctggcctacacggccgaaggcgagatcaataacgtccag
tgggcatccacccagcctgactggatcgcaatctgctacaacaactgcctagagattctc
cgcgtctga
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integrated database retrieval system
