Oncorhynchus nerka (sockeye salmon): 115106725
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Entry
115106725 CDS
T07952
Name
(RefSeq) polycomb protein SCMH1-like isoform X1
KO
K11461
polycomb protein SCMH1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
115106725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115106725
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
Canonical PRC1 (PRC1.2/1.4)
PRC1.4 specific proteins
115106725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MBT
SLED
RBR
SAM_1
SAM_2
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
115106725
NCBI-ProteinID:
XP_029485596
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All DBs
Position
LG3:21679386..21728038
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AA seq
734 aa
AA seq
DB search
MRKPVPQKAIEWKDGRQIKHARSGRPSRVPSQYQGGHFSWDKYLKETGASAAPAHCFRQG
ATPPVNEFKAGMKLEAQDPRNTTSTCIATVVGLTGSRLRLRLDGSDNKNDFWRLVDSSEI
QPIGNCEKNAGMLQPPLGFRLNASSWPMFLLKTLNGAEMAPARIFHKQEPPAPEQNSFQV
GMKLEAVDRKNPHFICPATVGALRGVEVLVTFDGWRGAFDYYCRYDSRDIFPVGWCSLTG
DNLQPPGTKGLCVPVCMYAVLPKTLGCLSDGSEGTAMHPMPGQPPGQRGRKPGRRKAKLT
GLWGQKGAGVGTQAPLPRNGLEHIKVPKKRGPKPGSKLGWAKRAGWLEGAMAGPGRPMSR
PRGRLPADWAQRMALQEGQVESIKIPKKRGPKPGSKRKPRVVPNPVPVSPNSNMPEPDTS
TVPLDNATIPSAALHAATVCVYLNKYGKVGPHLDGRRVQQLPDHFGPGRASSVLQQCVQA
CVDCAHNQSSVFSCLKPGHGGEVILAHFDQQHHTLTLPTVNSVTYVLRFLEKLCHNLYCD
PLFGNQPVPQGGLHYDSHAHPERRSFREGLTTGPGRGSKRFLQDSYYSPLPHKLAKNLCL
SLEGDPFLMVNGVGGSGHLKKSPLSPGSTGQPLGLRSPTKLLHLNSSGSERFRESPRPSG
QDPNLWTVKDVMQFIRDIDPLLAPHADLFRKHEIDGKALLLLRSDMMMKYMGLKLGPALK
LTFHIDKLKHGRPN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaggaagccagtgccacaaaaagctattgagtggaaagatggcaggcagatcaagcat
gcccgaagtggccgtccctcccgggtcccatcgcagtaccaaggaggtcacttcagttgg
gacaaatacctgaaggaaacaggtgctagtgctgcacctgcgcactgcttcagacagggc
gcaacacctccagtgaatgagttcaaggcgggcatgaagctggaggcgcaggaccctcgg
aatacaacgtccacctgcattgctacggtggtgggcctgactggatcgcggctgcgcctg
cgcctcgatggctccgataacaagaacgacttctggcgcctggtggactcatcagagatc
cagcctatcggcaactgcgagaagaacgcaggcatgctgcagccgccattgggcttccgt
ctgaacgcatcctcctggccgatgttccttctaaaaacactcaacggagccgaaatggcc
ccagcacgcatctttcacaagcaggagcccccagccccagagcagaactccttccaggtg
ggcatgaagctggaggcggtggaccgcaagaacccccacttcatctgtccggccacggtg
ggagcgctgcgtggcgtggaggtgctggtcaccttcgatggctggcggggtgccttcgac
tactactgccgctacgactcccgggacatcttccccgtgggctggtgctctctcaccggg
gacaacctgcagccgccaggcaccaaaggtctgtgcgtgcctgtgtgtatgtatgcagtg
ctacccaagaccctcggttgcctttcagacggtagcgagggaacagccatgcaccccatg
ccaggacagccgcctggccaacgggggcgcaagccaggccgcaggaaagccaagctgaca
gggctctggggccagaagggggccggagtaggaacacaagcccccctgcccagaaatgga
ctggagcatatcaaggtccccaagaagagaggccccaaaccggggagtaagttgggctgg
gcgaagagagcaggctggctggagggtgccatggcaggcccagggcgacccatgtcccgg
cccagagggaggctgccagccgactgggcccagaggatggccctgcaggagggtcaagtg
gagtctatcaagatccccaaaaagagagggcccaagcccggcagcaagagaaaaccgcgg
gtggtgcccaaccccgtgcctgtttcccccaacagcaatatgccagagccagacaccagc
acggtgcccctggacaacgccaccatccccagcgctgccttgcatgctgcaacagtgtgt
gtatacctgaacaagtatgggaaggtgggaccccacttggacgggcggcgggtgcagcag
ctgcccgaccactttggtccaggccgggcttcctcggtgctacagcagtgtgtccaggcc
tgtgtggactgtgcccacaaccagagctctgtcttctcctgcctcaagccaggtcacgga
ggagaggtcatattagcccactttgaccagcagcaccataccctcaccctgcccacggtc
aacagtgtcacgtacgtcctgcgcttcctggagaaactctgtcacaacctctactgtgac
cctctgtttggcaaccagcccgttccccaagggggcctgcattacgatagccacgcccac
ccagaaaggagaagttttagggagggcctcacgacgggtccaggaagaggctccaagcgg
ttccttcaagactcctactacagccccctcccccacaagctggccaaaaacctttgcctc
tccttggaaggtgaccccttcctcatggtgaacggtgtagggggttctgggcacttaaaa
aagagccccctgtccccgggctcgacagggcagcctctgggcctgcggtcccccaccaag
ttgctacatctcaactcttcaggctctgagcgtttcagagagagccctcggcccagtggc
caggaccccaacctgtggacggtgaaggacgtcatgcagttcatcagagacatagacccc
ctactggccccccacgcagatctcttcagaaaacacgagattgatggcaaagccctcttg
ttactacgcagcgacatgatgatgaaatacatgggcttgaagctcgggcctgccctaaaa
ctcacattccacatcgacaagctcaaacatggacgcccaaattga
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