KEGG T07952: 115106783

Oncorhynchus nerka (sockeye salmon): 115106783

Entry

115106783         CDS       T07952

Name

(RefSeq) E3 ubiquitin-protein ligase rififylin-like isoform X1

K20804

E3 ubiquitin-protein ligase RNF34 [EC:2.3.2.31]

Organism

one Oncorhynchus nerka (sockeye salmon)

Brite

KEGG Orthology (KO) [BR:one00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:one04121]
    115106783
Enzymes [BR:one01000]
2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.31  RBR-type E3 ubiquitin transferase
     115106783
Ubiquitin system [BR:one04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   RBR proteins
    115106783

SSDB

Motif

Pfam:

RNF34L-like_3rd SAP_RNF34_RFFL FYVE_CARP1-2 zf-C3HC4_3 ARMET_C zf-RING_5 FYVE_2 Prok-RING_4 zf-C3HC4_2 FYVE

Other DBs

NCBI-GeneID:

115106783

NCBI-ProteinID:

XP_029485722

LinkDB

Position

LG23:complement(25483920..25501137)

AA seq 361 aa
MWASCCNWLCLDTATVEESNSRTRHQAYTNSGYSNYPSPPLPDHTCKACGSRFVTLARKH
VCMDCKNNYCGRCSAQLEPRPRLCHTCQRFHGTLFDRTELMKVKVKDLRDYLHLHKVSTQ
MCREKEELVELVLGQQTQSLSGPIVNPLTQTATQHETTPPPGHPTTTTPSTHPDSTSTDH
APSQPPPSQEDSQTVSVLVSPGLEEPLDTEGDTELQGEQELQSSDTEEVLVPGRRASLSD
LAVAEDIEALSVRQLKEILARNFVNYKGCCEKWELMERVTRLYHDQKDLQNHLVSSTNDG
TDPSGTPGQEENLCKICMDSPIDCVLLECGHMVTCTKCGKRMNECPVCRQYVVRAVHVFR
S

NT seq 1086 nt +upstreamnt +downstreamnt
atgtgggcgtcctgctgtaactggttatgtttggacactgccacggtggaggagagcaac
agccgcacgcgtcaccaggcctatactaactcaggctacagcaactacccgtcgccccca
ctcccggaccacacgtgcaaagcctgcggaagccgcttcgtcaccctagccagaaagcat
gtctgcatggactgcaagaataactactgcggcaggtgttcggcccagcttgagccccgt
ccacgcctttgccacacctgccagcggttccacggcacacttttcgatcgcaccgagctg
atgaaggtcaaggtgaaggacctgcgcgactacctccacctgcacaaggtctcaacgcag
atgtgccgtgagaaagaggaactggtggagttggtcctgggacagcagacacagtcactc
tctggcccaatcgtaaaccctctgacccaaaccgccacccagcatgagacaactcctcct
ccaggacaccccaccaccaccacaccctctacacaccccgactccacctccacagaccat
gccccttcacagccgccaccctctcaggaggacagtcagaccgtgtctgtgttggtgtcc
ccgggtcttgaggagccactggacactgagggagatacagagctgcagggagagcaggag
ctgcagtcctcagacacagaggaggtgctggtgccaggccgcagggcgtcgctgtctgac
ctggccgtggcagaagacatcgaggccctcagcgtccggcagctcaaggagatcctggcc
cgtaacttcgtcaactacaagggctgctgcgaaaagtgggagctaatggagagggtcacc
cgcctctaccacgaccagaaggacctccagaatcatctggtttcaagtacaaacgacggc
acagaccccagcggtacccctggccaggaggagaacctgtgtaagatctgcatggactct
cccattgactgtgtcctactggagtgtggccacatggtcacctgcaccaagtgtggcaag
cggatgaacgagtgccccgtctgcaggcagtatgtggtgcgggccgttcatgtctttaga
tcctga

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