Oncorhynchus nerka (sockeye salmon): 115106825
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Entry
115106825 CDS
T07952
Name
(RefSeq) CD166 antigen homolog
KO
K06547
activated leukocyte cell adhesion molecule
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
115106825
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
one04515
]
115106825
04090 CD molecules [BR:
one04090
]
115106825
Cell adhesion molecules [BR:
one04515
]
Immunoglobulin superfamily
ALCAM
115106825
CD molecules [BR:
one04090
]
Proteins
115106825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
C2-set_2
ig
I-set
V-set
Ig_4
DUF6479
Big_7
Shisa
LapA_dom
Motif
Other DBs
NCBI-GeneID:
115106825
NCBI-ProteinID:
XP_029485809
EnsemblRapid:
ENSONEG00000006303
LinkDB
All DBs
Position
LG23:complement(28160001..28235252)
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AA seq
563 aa
AA seq
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MMDSTGRFLLSLVTAATFLQVRSTVTVIGLYGETIEVPCNNGAAKPEDLIFTKWKYKMDD
GTSGDLLVKQAHKEQAQIQAMDGYKDRVTIAANSSLMIQGGSLVDQRTFTCMVVYGSNLD
EHPVDVLVHKKPLPPQIKDKAKELENGKLTSLGVCTAEDANPAAAIMWSKNGKLLVADGK
TIIITPSVKMDPSTGLSTTTSGLQYTAVKSDVGAKFTCTAKHSLETQVSAPETFIIHYPT
EKLSLQVLAKAPIREGDNVTLKCNADGNPPPTSFYFSIKGQKVTVKDSDTFTLTAVTRNS
TGDYKCSLVDDDKMEASEKVVVSYLDLSLSPTGKVLKMVRDTLLVKMEQDASGDAKVSWT
KDNRKLDETPRFDNVTYADAGFYVCEVSVAGIKRSQSFQLVVEGTPVIKKMTEHHSEDGR
HKVLTCEAEGVPRPSVQWSINGTNEENSYINGKATHKITVVPTGNLTITCIATNKLGNHF
MALNVSSLIKDEKIPGKGAQDDSSDQALLIVLIVVGLIIAAALVGLFYWLCIMKSRRGTW
KTGEKEAGTSEESKKLEECKAKV
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atgatggattcgactggccggttcttgctttccctcgtcactgctgctacttttctacaa
gttcgtagcacagtaactgtaataggcttgtacggagagacgatcgaagtgccatgcaat
aatggagctgccaagccagaggatcttatcttcactaaatggaaatataagatggatgac
ggcacctccggagacctcctggttaagcaggcgcacaaggagcaggcccagatccaggcc
atggacggctacaaggaccgagtgaccatcgcggccaactccagcctcatgatccagggg
ggttccctggtggaccagaggaccttcacctgcatggttgtgtacggctccaacctggac
gagcaccctgtcgacgtcttggtccacaagaagccgttgccaccacagataaaagacaaa
gccaaagagctggagaacggcaaactgacgtcgctaggcgtgtgtacggccgaagatgca
aaccctgccgccgcaatcatgtggtccaaaaacggcaagctgctggtggctgatggaaag
accatcatcatcacgcccagtgtgaagatggatccgtcgacgggcctgtccactaccacg
tccggtctgcagtacacagcggtgaaaagcgacgtgggagccaaattcacttgcaccgcc
aaacacagcctggaaacacaggtgtccgctcccgagaccttcatcattcactatccaaca
gagaagttgagcctccaggtgctggcgaaggctcccatcagagagggcgacaacgtgacg
ttgaagtgcaatgcggacggcaaccctcctccaaccagcttctacttcagcatcaagggc
cagaaagtgacggtgaaagattccgacaccttcactctgactgccgttacgcgcaacagc
accggagactacaagtgctcgctggtcgacgatgacaaaatggaggcctcggaaaaggtt
gtcgtgagctacttggatctcagtctcagcccaacaggaaaggtccttaagatggtcagg
gacaccttgctggtgaaaatggagcaggacgcctccggcgatgctaaagtgtcatggacc
aaggacaacagaaagctggacgaaacgcctaggtttgacaatgtgacgtacgctgatgca
gggttctacgtttgtgaggtgtccgttgcaggcatcaagcgcagccagtccttccaactc
gtagtagaaggcacaccagtcatcaagaagatgaccgagcaccatagcgaggatggcaga
cacaaagttctgacctgcgaggccgagggtgtgccccggcccagtgtccagtggagcatc
aacggcacaaatgaggagaattcctatatcaatggcaaggcaactcacaagatcacggtg
gtgcccacaggaaacctgaccatcacctgcattgcgaccaacaagctgggaaatcacttc
atggccctcaacgtctcctccttaattaaggacgaaaaaataccaggaaaaggggcacag
gatgacagttcggaccaggctttactgattgtgttaattgttgttgggctcatcatagct
gctgctcttgtggggctgttctattggctttgcattatgaaatcaaggcgagggacctgg
aaaacaggagagaaggaagccggaacgtccgaagagagcaagaaactggaggagtgcaaa
gctaaggtgtag
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