KEGG   Oncorhynchus nerka (sockeye salmon): 115106835
Entry
115106835         CDS       T07952                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 12-like
  KO
K03126  transcription initiation factor TFIID subunit 12
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115106835
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115106835
   03036 Chromosome and associated proteins [BR:one03036]
    115106835
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     115106835
   Coactivators
    SAGA/TFTC/STAGA complex
     115106835
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     115106835
    STAGA complex
     115106835
    TFTC complex
     115106835
    SAGA complex
     115106835
    SLIK complex
     115106835
SSDB
Motif
Pfam: TFIID_20kDa CBFD_NFYB_HMF Histone TFIID-31kDa TAF4 CENP-T_C TAF10 Pheromone
Other DBs
NCBI-GeneID: 115106835
NCBI-ProteinID: XP_029485833
LinkDB
Position
LG3:complement(21840641..21846252)
AA seq 162 aa
MTQYQPQSNRSNFFTVKAEASSTPPLATSMANSSAAAPGKVMGTPGPAGRISPEGSQVLS
KKKLQDLVREIDPNEQLDEDVEEMLLQIADDFIDSVVTAACQLARHRKSNTLEVKDVQLH
LERQWNMWIPGYGSDEIRPYKKACTTEAHKQRMALIRKTTKK
NT seq 489 nt   +upstreamnt  +downstreamnt
atgacccagtaccaaccacagtccaaccgttccaacttcttcaccgtgaaagccgaggcc
tcctcaacaccacctctcgccaccagcatggccaatagcagcgccgccgctccagggaag
gtgatgggcacacctggccctgccggcagaatcagcccagaaggaagtcaggtgttgagt
aaaaagaagctgcaggacctagtaagagagattgaccccaatgagcagctcgatgaggat
gtggaggagatgctgctgcagattgcagatgactttattgacagtgtggtgacggctgcc
tgtcagctggcccgccatcgcaagtccaacaccttagaagtgaaggacgtccagctacac
ctggagcgccaatggaacatgtggattcctggctatggttcagatgagattcggccgtat
aagaaggcttgtaccacagaggcccacaaacagagaatggcattgatccgcaaaacaacc
aaaaagtag

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