KEGG   Oncorhynchus nerka (sockeye salmon): 115106894
Entry
115106894         CDS       T07952                                 
Name
(RefSeq) transportin-3-like isoform X1
  KO
K15436  transportin-3
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03013  Nucleocytoplasmic transport
one03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    115106894
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115106894
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:one03016]
    115106894
Transfer RNA biogenesis [BR:one03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    115106894
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N
Other DBs
NCBI-GeneID: 115106894
NCBI-ProteinID: XP_029485947
LinkDB
Position
LG23:32443087..32460111
AA seq 921 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWELADQLLQLKQDVESCYF
AAQTMKMKIQMSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLAQQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQHFQGLL
DIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQDPRN
GKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVERC
CRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGLL
DMLQALCMPTFQLLEQTNGLRNHPDTVDDLFRLATRFVQRSPITLLSSGIIVHIIQCAIA
ATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKQLIGQAMGQHGQQLVTQLMHTCC
FCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHKQV
TSAEECKQVCWAIREFTRLFR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgttcaggctctttatcatgatccg
gaccccgccggcaaagagcgagcctctgtgtggctgggggagctacagagatcgatgtac
gcttgggagttggcagaccagctcctccagctgaaacaggatgtggaatcttgttacttt
gccgcccagaccatgaagatgaagatccagatgtcgttctttgagcttcccccagagacc
catatcgccctccgagactccctgctctcgcacatacagagcctcaaagacctctccccc
atcatcgtcacccagctcgctctggccattgcagacctcgcactacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccctacgcatcgga
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggtcacc
ctactgatgacgtgtgtggagaagtctggcagcaatgagaaaatgctgatcaaggttttc
cgctgtctgggcagctggttcaacctgggagtcctggacagcaactttatggctaacaac
cagctcctcatggtccttttccaagtgctgcagagagatgagacgtccactaacctgcac
gaggccgcgtccgactgtgtgtgttcagcgctgtacgccatcgagaacgtggacacgcac
atgcccctggcccagcagctcttccagggcgtcctcacgctggagacagcctaccacatg
gccgtggcacgggaggacctcgacaaagtgttgaattactgtaggatcttcactgagttg
tgtgagacgtttctggagacgacagtcaggagtccaggccagggcatgggagacctgcgg
acgcttgagctactgctcatctgtgcaggacaccctcaatatgaggtcgtggagatctcc
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgctgcacggcctggcccgccactgccaacta
gaccccgaccacgagggcatcccagaagatactgatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtcattttccttgtgggctccatggaatgtttctcccag
ttgtactccactctaaaagaagggaaccctccctgggaggtgactgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttagagcaggtggtgctgctgccagagactgtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctagaccccgtg
ctgaactacctgatgaagggcctgagggagaagaccctggcttccgtggcggccaaggcc
atccataacatctgctctgtgtgtcgggaccacatggcccagcacttccagggcctgctg
gacatcgcccgtgccctcgactccttcgccctgacgaccgaagccgccgtaggcctcctc
aaaggtacagccctggtcctggctcgcctgcccctggagaagatcgctgagtgtttgagt
gacctgtgtgctgtgcaggtcatggccctcaaaaagcttctctctcaggaccccaggaat
gggaaagctgctgaccccactgtctggctggacagactagccgtcatcttccgacacaca
aaccccatcgtagagaatggacagacacacccatgtcagaaagttatccaggagatctgg
ccggtcctatcagagactctgaacacacaccaggctgataaccgcatcgtggagcgctgt
tgtcgctgcctgcggtttgctgtgcgctgcgtgggcaagggctctgcctctctactacag
ccactcgtcacacagatggtcagtgtgtatcaggtgtatccccactcctgcttcctgtat
ctgggcagcatcctggtggatgagtacggcatggaggagggctgcagacaaggtctactg
gacatgctgcaggctctttgtatgcccaccttccagctattggagcagaccaacggcctc
cgtaaccacccagacacagtagatgacctcttcagactcgctaccaggtttgtccagcgt
agtcccatcaccctgctcagcagtggcatcatcgtccacatcatccagtgtgccatcgcg
gccacgacactggaccaccgggatgccaactgcagcgtcatgaagtttgtcagagacctc
atccacacgggcgtcagcaacgaccacgaggatgactttgagctgcggaagcagctaata
ggccaggccatggggcagcacgggcagcagttggtcacccagctcatgcacacatgctgc
ttctgcctgccaccttacacactccccgatgtggctgaggtgctctgggagatcatggtg
ttcgacaggccgacgttctgccgctggctggagaatgcgctgaaggggcttcctaaagag
acgtcaggcggggcggtgaccgtcacacacaaacagctcacagacttccacaagcaggtc
accagtgcagaggagtgtaagcaggtgtgctgggctatccgggagttcaccagattgttc
cgatag

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