Oncorhynchus nerka (sockeye salmon): 115106977
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Entry
115106977 CDS
T07952
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like isoform X1
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
115106977
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
one02000
]
115106977
Transporters [BR:
one02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
115106977
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Ortholog
Paralog
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Sugar_tr
Kazal_1
Motif
Other DBs
NCBI-GeneID:
115106977
NCBI-ProteinID:
XP_029486099
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Position
LG23:complement(36177180..36250392)
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AA seq
730 aa
AA seq
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MPRNSIRVTLPKENVSHLCRMEPAAKERGTTENGGSSSTRAQRSSCTSLKMFLVALSFAY
FAKALSGSYMKSTITQLERRFDIPSYLTGVIDGSFEIGNLLVIAFVSYFGAKLHRPKIIA
MGCVLMAMGTFIIALPHFLIGRYKFETSIRSSVNSTNNLSPCPARLLSPAALASGDPHSK
TPSTGTVGCEGESNLSMWIYVFLGNVLRGIGETPVQPLGISYIDDFAREENAAFYIGCVQ
TIAVIGPVFGYLLGSLCAKIYVDIGFVNMESITISPGDARWVGAWWLGYLVAGVITLLSA
IPFWFLPRSLPIPSDRGPAQCTPEQTSFIKDSPLLEHKYQADEPAGFLEMAKDFIPTLKT
LLGNPVYFIYLCVTIIQLNSLIGMVTYKPKYIEQHYGQSASKANFLMGTINIPAVALGIF
TGGLLMKRLKLSIMGAAKFAFGTSLIGYFLSLFFFVMSCENAKVAGITLPYNRAVGVSYE
EHSVFSACNSDCVCSDRDWDPVCGENGITYVSPCLAGCQTSTGSGKNTVFSNCSCVVAAG
LSSGNLTASVGHCPHRDDCDRVFPYFLALSVITSFIISLGGTPGYMVLIRCIKPQLKSLA
LGFHTLSTRTLAGIPAPIYFGAIIDTTCLKWGQKRCGGRGACRIYNTTAYRIAYLGLTMG
LRTVSFLLCILGFVLLKRHLRREERSAHQVANGGAELEVLRKEEVLASNSDQSLRTPTTD
YNNTERETRL
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgccaagaaattccataagggtaactttgcccaaggaaaacgtgagccatctgtgcagg
atggagccggcggccaaggagagagggacgacagagaacggaggcagctcctcgacgagg
gcgcagcgctcctcctgcaccagcctcaagatgttccttgtagctctgtcgtttgcctac
tttgccaaggccttgtctggcagctacatgaagagcacaataacccagctggagaggcgc
tttgacatccccagttacctaacaggcgtcatcgacgggagctttgagataggtaacctg
ttggtgatagcattcgtgagttactttggtgcaaagctgcatcggcccaagatcatagcc
atgggctgtgtactgatggccatgggaacattcatcatcgctctgccacacttcctcatc
ggacgctataaattcgaaacatcaatccgatcgtcagtgaattcaaccaataacctctct
ccatgtccagcgcgtctgttgtcacccgccgcgctggcttcgggtgacccgcattctaag
acgccaagcacagggacagtaggttgtgaaggagagtccaacctctccatgtggatctat
gtgttcctggggaatgtcttacgagggatcggggagacgccagtgcagccccttgggatc
tcgtatatagatgatttcgccagggaggaaaatgctgcattttacattggctgcgttcag
accatagctgtcattggtcctgtgtttggctatttactgggatccctgtgtgccaaaata
tatgtggacattggatttgtcaacatggagagtatcaccataagtcctggtgatgctcgc
tgggtgggggcctggtggttaggttaccttgtagctggggtgatcaccctgctttcagcc
atccccttctggttcctgccccgttccctgcccatcccgtcagaccgaggcccagcccag
tgcaccccggagcagactagcttcatcaaagactcccctctcctggagcataagtaccaa
gccgacgagccagctggctttctggagatggccaaagatttcataccaacgttgaaaacc
ctcctggggaacccagtgtacttcatctacctgtgtgtaaccatcattcagctgaactct
ctcatcggcatggtaacctacaagcccaagtacatagagcagcattacgggcagtccgca
tcaaaagccaatttcctgatgggtacaatcaacatccctgccgtggcgttgggaattttc
actggcggcctgctcatgaagaggctgaagctgagcatcatgggagcggccaagtttgcg
ttcggcacctctctgataggctacttcctatccctcttcttcttcgtcatgagctgcgag
aacgccaaagtggctgggatcacgctgccctacaaccgggcggttggtgtatcgtatgag
gagcactcagtattctcagcctgtaactcagactgtgtgtgttcagacagagactgggac
cctgtttgtggagagaacggcatcacgtacgtctctccctgcctggctggctgccagacc
tccacaggatcagggaagaacacggtgttctctaactgtagctgtgtggtggcagcaggg
ctgagcagtggtaacctgacagccagtgtaggccactgtcctcacagagacgactgtgac
cgtgtcttcccttacttcctggctctctctgtcatcacttcctttatcatctccctgggt
ggcacgccaggctacatggtcctcatcaggtgtatcaagcctcaactgaagtccttggct
ctggggttccatactctgtccacacgtacacttgcgggcatcccagcgcccatctacttt
ggggcgatcatcgacaccacgtgtctgaagtggggccagaagagatgcggagggagagga
gcctgtcggatatacaacactacagcatacaggatagcttacctgggtctaactatgggc
ctgaggacagtttccttcctgctgtgtatactgggatttgtgctgctcaaacgacacctg
cggagagaggaacgcagtgcccaccaagtggccaatggaggagcagaactggaggtactc
aggaaagaggaagtcctagcctccaactcggaccaatcgctacggactcccacaacagac
tacaacaacacagagagagagacacggctgtga
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