KEGG   Oncorhynchus nerka (sockeye salmon): 115107002
Entry
115107002         CDS       T07952                                 
Name
(RefSeq) caprin-2-like isoform X1
  KO
K18744  caprin-2
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:one03019]
    115107002
Messenger RNA biogenesis [BR:one03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Factors involved in mRNA localization
    Other mRNA localization factors
     115107002
SSDB
Motif
Pfam: C1q Caprin-1_dimer Caprin-1_C
Other DBs
NCBI-GeneID: 115107002
NCBI-ProteinID: XP_029486160
LinkDB
Position
LG23:37570558..37578498
AA seq 956 aa
MNPVGDTKCAHIGQDLNMVQLSPSPARDASPSPECSEKGRQGSPKTGSPKIGSHGGLSPL
QLALGTSIPNYQGYESYIEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGESLNQDQIDAV
EKYDEVIHNLQFAQELHKTLGGLTQELLKAQKKALRKEQMAKQEVEKRRLCVVLQVKYLL
QTLLQHEHIRKDLLSARNPQLQVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDL
LEGNNKAVAGTTYKVLKAKLAKLMDCGYFDCVPPPPSKSPKEVEIPMTKKTVSETASLST
LMMSNKKDVPSREFLNRHYLPDTDPNGCRDTPVTPNWKAEFQAMKEQEPPDSWDMESDST
QPVIQNPWRGAAVFISKVPVTTKKDNAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSS
LPKDPILLKDPILRKQQLEDLMTKIRGSFSFMQDSLLSGEGSPTNGHPRLGRHASGSPSP
LVQRESRRSPVDHLPKTLHSTPLPSKLLPVDDEPSLTNGDGGCLESCDLDLTTEDLAHVI
AIDPCLLLSESETACPSPTAPPPSARTPISESGKQSPCNGVVPPCTPTPTQGQPFSTPPS
RRTLSMAPSVPFQTMHSVFKVNAPLLPTGDFKSDIIPYLDSGNDLCYVTTSTQTPPDFAP
LEDEHLQSVNQSECLVGSGGQIFLSPSQSGGTMGRSDQSYYRGSVRGIARGGKGLAHSYF
RSSGGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNSGWSDSSQVSSPDREGNY
SLVDSAHGDSLQGVGMDLTPQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANYTPG
TLDQPITFDQLHSNLGEMFNTNVGRFICPANGTYVFLFHILKLAVNVPLYVNLMRNDEVM
VSAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq 2871 nt   +upstreamnt  +downstreamnt
atgaatcccgtcggcgacactaaatgcgcacacattggccaggatttgaacatggtgcag
ctgtctccatccccagcccgggatgcgtctccttcacctgagtgctccgagaaggggagg
caggggagcccaaagacaggtagccccaagattggctcccatggtgggctgagtcctctc
cagctagcactgggaacctccatccccaactaccagggctacgagagttacatcgaggac
ggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagattaaattggaa
gactacaggaagcgtttgaaacacggggaatcactcaatcaagaccagatagatgcagtg
gagaagtatgacgaagtgatccacaacctgcagtttgcccaggagctgcacaagaccctg
gggggcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaaggagcagatg
gccaagcaggaggtagagaagaggaggctgtgtgtagtgctgcaggttaagtacctcctg
cagaccctgctgcagcacgagcacatcaggaaggacctcctctctgcccgcaacccccag
ctccaggttgcagagctacaaagcctgcttgagctcgctgaactactgggggtgaagagg
gacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctacctggacctg
ctggaggggaataataaagctgtagccggaaccacctacaaggtcctgaaggctaagttg
gcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagcaagagtccc
aaggaagtagagattcccatgaccaagaagacggtgtctgaaacagccagcctctctacc
ctaatgatgtcaaacaaaaaagacgtgcctagcagagagtttcttaacagacactacctg
cctgacacagaccccaatgggtgtcgagacactcccgttactccgaactggaaggctgag
ttccaggccatgaaggaacaggagccaccggactcatgggatatggagtctgactccact
cagcctgtaatccagaatccatggagaggggcggctgtgtttatctccaaagtgccggtt
actaccaagaaagacaatgctgaacccaaacagagaagagcgaagtctaaaagggagcgg
gacgccacagctgcacttcgtgtggacacccctgtggaggtgttcaactcccagtcttcc
ttgcccaaggaccccatcctgctcaaggaccccatcctgcgcaagcagcagctggaggac
ctgatgaccaagatcagaggctccttcagcttcatgcaggattctcttctgagtggtgaa
ggatcgcccactaacggccatcctagactgggccggcatgcctctggatccccctctcca
ctcgtacagagagagtcaaggagaagcccagtggaccatctccccaaaacactgcattcc
actccattgccttctaaactcctccctgttgatgacgaacccagtctgaccaatggagac
gggggttgtctagagagctgtgacctggacctgactacagaggacctggctcacgtcata
gccattgatccatgtctgctgctgtctgagagtgagactgcctgcccctctcctacagct
cctcctccctctgctcggactcccatctctgaatctgggaagcaatccccctgtaacggg
gtagtgcctccttgtaccccaacccccacccaggggcagccgttttctacccctcccagc
agacgtacactcagcatggccccctctgttcccttccagaccatgcattcggtattcaag
gtgaatgcccccttacttccgactggagactttaaatctgatattatcccctatttggac
tccggcaacgacctgtgctatgtcaccaccagcacccagaccccaccggattttgctccc
ctggaggacgaacacctacagtcggtgaaccagtctgaatgtctggtgggtagtggtggg
cagatcttcctgtcccctagccaatcaggtggcaccatgggccgttctgaccaatcatac
tacagaggatctgttagaggtattgcacgtggtggcaaggggctggcacactcctacttt
cgctcttctggtgggcacagaggaggaagcttcatcccccaggctcacctgtacggtgct
cgggacactggctaccagcacagctacaggcgtggtggaggcaatgcaggacaaaggcac
aataatagtggttggagtgactcctcccaggtgagcagcccagaccgggagggcaactac
tccctggtggactctgcccacggcgactcgctgcagggtgttggcatggacctcaccccc
caggtgacccctcatgccccccacaccctgatgcacgtacccatgtacccgctcccccag
catccccagcccctccgcgtggccttcacagcagcccgcacagccaactacaccccgggc
accctggaccagcccatcacctttgaccagctccacagcaacctgggggagatgttcaac
accaacgtgggtcgtttcatctgcccagccaacggcacctacgtcttcctcttccacatc
ctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgcaacgacgaggtgatg
gtgtctgcgtacgccaacgacggggctccggaccacgagacggccagcaaccactccatc
ctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgcggctccatctatggc
agcagctggaagtacagcacattctctggcttcctgctctaccaggactga

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