Oncorhynchus nerka (sockeye salmon): 115107084
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Entry
115107084 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: FYVE, RhoGEF and PH domain-containing protein 6-like
KO
K05724
FYVE, RhoGEF and PH domain containing 5/6
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115107084
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Pleckstrin homology (PH) domain-containing proteins
Dbl-Like RhoGEF family proteins
115107084
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
PH
FYVE
SOS1_NGEF_PH
PH_13
RHG20_PH
IQ_SEC7_PH
PH_20
MCM_OB
FYVE_2
Motif
Other DBs
NCBI-GeneID:
115107084
NCBI-ProteinID:
XP_029486320
LinkDB
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Position
LG23:40613399..40652353
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AA seq
1366 aa
AA seq
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MSAGVKKPPVAPKPKLAPLVKLSPPPIAPKPDLLLSQPSQSSPLLTQLSPAVLKRAKPVV
APKPCLSKPSAPAAPASPPPLRPRVPQTPSQECRGAGDHSLSFLNSRNGILSQPILRDSD
YIIPTCSCGLQDCSQCKRLGNGNVTVVGSNTLGSWPNGNATESTGTLVANRPGKTENGDS
EKSGGVTNTFHLRLKDKPQRQEGQRDGKGSRDEEKLQGNKEERQRNQKGQEGQQYQTGSG
DQSCNEVAETLTQTETKACNAEQTYTDSCNIDCNESDTIPTPLILPLEVSPIRTPPQTTP
PIRTPFQTVPSTRSPPQVLPPTLSPTQMDSEPDSTPSHAESSTQCSRIPRLPTPLSPCCP
SKPLPVPLPRKPRKLALVRQDGLEASTQEGETKNRSQGGEVGETEGSGGRCLTSEKEEHT
QGVYDSPSPSQDPEVEEEPHPVPPPRQKSLSPRLHRAIHCSLNRNTSHSLDLLSQPELNT
LTSESRGGGDEEEEEEVEEGYGDFERYPITRSLPKQIKLSCRPPPVGMTMKASSAEEGGS
PRAPPRKPQRHSLPAGAPPSITPPPPPPHHANTPMRELPATPQEKPAWRFPRPFFSRQSS
SRHSSGGSSRGPPQGKAALLGGKQRAQSFSSADLLARADGTKRSLSFRKLLELRLSVRML
PRLLARSGQSLDCTSVEPGGGGGTVDQSDGNVGVSGRDGEGSVEYENVPLYEEIPEYMNL
PFLSARLGWPLTHSLDPSTHRHSDSDVYEVQDPYESHCDYKRPHSIDYERGWHGLDDAHS
EEEVHSSDEDDNSSTSSKEHLELSEEDRQQEDEVKRKKVVHIAQEIMSSEKVFVDVLKLL
HIDFRDAVAKATRQNGKPVVEERILTQILYYLPQLYQLNRDLLRELEERVAHWGDHQRLA
DIFVQKGPYLKMYSTYIRQFDNNVAMLDEQCRKNPGFAAVVREFEMSPRCASLALKHYLL
KPVQRIPQYQLLLTDYLKNLPEDSSDYKDTQAALGIVKEVANHANDIMKQGDNFQKLMHI
QYSLNGQHEIVQPGRVFLKEGTLMKLSRKVMQPRMFFLFNDTLLYTTPVQSGQYKLNSML
SLAGMKVSKPSQEAYQNELNIESVERSFILSASSATERDEWLAAIATAIDDHTRKKITFI
SSRSQEEADGVCDSGAPLGSKAPIWIPDLRATMCMVCTCEFTLTWRRHHCRACGKVVCQT
CSSSKFYLEYLKNQPARVCDHCFVKLQENSDRVASGALSPTGRSGGFSFSRKQKKIPAAL
KEVSANTENSSMSGYLQRSKGNKKQWKRLWFVIKNKVLYTYAASEDVAALESQPLLGFFL
REEKCGPFQKLQFKLYHKNTLFYIFKADDIPTAQRWIEAFQEAMIL
NT seq
4101 nt
NT seq
+upstream
nt +downstream
nt
atgagcgcaggtgtgaagaagccgccagtggctcccaaacccaaactcgcccccttggtg
aagctctcgcctcctcccatcgcacccaaacccgatcttctcctctcccagccttcccaa
tcctccccccttcttacccaactctcccctgccgtgctaaagagagccaaacctgttgtg
gcgcccaaaccatgcctctccaaaccctctgccccagcagccccggcttctcccccaccc
ctcagacccagagtaccccaaaccccatcccaggagtgccgaggggctggggaccacagc
ctctccttcctcaactccagaaacgggatcctgtcgcagcccatcctgcgcgactcggac
tacatcattcctacgtgctcctgcggactccaggactgctcccaatgcaaacgactaggg
aatgggaacgttacagtggtcgggagcaatacgctcggctcctggccaaacgggaatgcc
acggaaagcactggaacgctggtagccaatcggccaggtaaaacagagaacggagacagt
gagaagagcggaggagtgaccaacaccttccatctcagactcaaggacaaacctcagaga
caggaggggcagagggatggaaaggggagcagggatgaggagaagctgcaggggaacaaa
gaggagagacagaggaaccagaaaggacaggagggtcagcagtatcagactgggtcaggg
gaccagtcatgtaatgaggtggcagagacactaacacagactgagactaaagcttgtaat
gcagaacagacatacactgacagctgtaatatagactgcaatgagagcgacactattccc
actcccctcatcctcccactggaagtctcccccattcgcacccccccacagacaaccccc
cccatccgcaccccctttcagactgttccatccacccgcagccccccacaagttttaccc
cccaccctctcccccacccagatggacagtgagcctgacagcaccccctcccacgcagaa
agcagtacacagtgttccagaatacccaggttacccacacctctcagtccctgctgcccc
agtaagcccctgcccgtgccgctgccacgcaagccccgtaaactagccctggtaaggcag
gacggcctggaggccagcacccaggagggagagacaaagaaccgctcacaggggggagag
gtgggggagactgaggggagtggggggagatgtctcacgtcagagaaggaagaacacacc
cagggagtgtatgacagtccctctccctcccaggaccctgaagttgaagaggagcctcac
cctgtgcctccacctagacagaagtccctctccccccgcctccacagagccatccactgt
tccctcaaccgaaacacctcccactctctggacttgctctctcagcctgagcttaacaca
ctaacctcagagagcagaggaggaggggatgaagaggaagaggaggaagttgaggaaggg
tacggagactttgagcgctaccccatcacccggagcctgcccaaacagatcaagctcagc
tgccgcccgccccccgtcggcatgacaatgaaggccagctcggcggaagagggagggtca
cccagggccccacccaggaagccccagagacacagcctgccagcgggtgcccccccgtcc
atcaccccccctccaccccctccgcaccacgccaacacccccatgagggagctgcctgcc
accccacaggagaaaccagcctggcgcttcccaaggcccttcttcagcaggcagagctct
tccagacacagcagcggcggcagcagccgagggcccccccaggggaaagcagctctgctg
gggggaaaacagagggcacagtccttctcctcggctgacctgctggcccgcgccgacggc
accaagaggagcctttccttccggaagcttctggagctgcggttgtctgtcaggatgttg
ccacgattactggccagaagcggccagtctctggattgtaccagcgtagagccgggcggg
gggggggggacggtggaccagtctgacggcaacgtgggggtgtctggcagggatggagag
gggtcggtagagtatgagaacgttcctctgtatgaggagataccggagtacatgaacctg
cctttcctcagcgcacggctgggctggccactcacacacagtctggacccaagcacgcac
agacacagtgactcagacgtctatgaggtgcaggatccatacgagagccactgtgactat
aagcgaccccattccattgactatgagagaggctggcatggattggacgatgctcactct
gaggaggaagtccacagctctgacgaggatgacaacagctccacctccagcaaggagcac
ctggagctgtcagaagaagacagacagcaggaggatgaggtgaagaggaaaaaggttgtg
catatcgcccaggagatcatgagctctgagaaagtgtttgtggacgtcctgaagcttctt
cacatagatttccgggacgcagttgccaaggcgacgcgtcagaatggtaagccagtggtt
gaagagcgtattctaacccagatcctctactacctgcctcaactataccagctcaaccga
gacctgctccgggagctagaggagagagtggcccactggggggaccaccagaggctggca
gacatctttgttcagaaggggccgtacctgaagatgtactccacctacatccggcagttt
gacaacaacgtggctatgctggacgaacagtgtaggaaaaaccctggcttcgccgctgtg
gtccgggagtttgagatgagtcctagatgtgccagcctggctctgaagcactacctgctg
aaacctgtgcagagaatcccccagtatcagcttctgctcacagattatctgaagaacctt
cctgaggactcgtctgactacaaagacacgcaggctgctctgggcatagtaaaggaagtg
gccaaccatgccaacgacatcatgaaacaaggggataactttcagaagctgatgcacatt
cagtacagtctgaacggacagcatgagattgttcagccaggcagggtgtttcttaaggag
ggcactctgatgaagctgtccaggaaggtcatgcagccacggatgttcttcctgttcaat
gacactcttctgtacaccactccagttcagtctggtcagtataaactcaacagcatgctc
tctctggcgggcatgaaggtgagtaagcccagtcaggaggcgtatcagaatgaactgaac
attgagagtgtggagcgttccttcatcctgtctgccagctcggccacagagagagatgag
tggctggcggccatcgccacggcgatagacgaccacaccaggaagaagatcaccttcatc
tccagccggagtcaggaggaggctgatggcgtgtgtgacagtggggccccactgggttct
aaggcccctatctggatcccagacctgagggccaccatgtgtatggtctgtacctgtgag
ttcaccctcacctggagacgccaccactgccgagcctgcgggaaggtggtgtgtcagacg
tgctcgtccagtaagttctatctagagtacttgaagaaccagccggctcgtgtgtgtgac
cactgcttcgtcaagctacaggagaacagtgaccgtgttgcttctggggcactgtctcct
actggcagatctgggggattctctttctccaggaaacagaagaagatcccagctgctctc
aaagaggtgtctgcaaacacagagaactcctccatgagtggctacctacagaggtcaaag
ggcaacaagaagcaatggaagaggctatggttcgtcatcaagaacaaagtcctgtacacc
tacgccgccagcgaggacgtagctgctctagagagccagcctctgctaggcttcttcctg
agggaggagaagtgtggccctttccagaagctgcagtttaaactgtaccacaaaaacacc
ctgttctatatcttcaaggctgacgacatccccactgcacagaggtggatagaggctttc
caggaggccatgattctttaa
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