Oncorhynchus nerka (sockeye salmon): 115107114
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Entry
115107114 CDS
T07952
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 2 isoform X1
KO
K09099
aryl hydrocarbon receptor nuclear translocator-like protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115107114
Transcription factors [BR:
one03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
115107114
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
bHLH_INO2
PAS_2
Motif
Other DBs
NCBI-GeneID:
115107114
NCBI-ProteinID:
XP_029486373
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Position
LG23:complement(42060852..42091973)
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AA seq
712 aa
AA seq
DB search
MFFALKNNFGSPPKCRSMEQTHTRRSPRTRLWKFNNFEHICGILPCNFAGPLQLGETNSL
PVSRPYVITPHLAGAMPDVITPHLAGAMPDVITPHLAGSLPDVITPHKAGAMPDVITPHK
AGAMPIQELSRKRKGDLDNRENGDAQIEAQQSRSEDDDQQVKIKWFREPHSQIEKRRRDK
MNTLIDELSAMIPSWNPMAKKLDKLTVLRMAVQHLKALKAGASSSFTDVNYKRKPSFLPQ
DDLKHLVLTAADGFLFVVSCDRGKILFTSESVSKFLNYSRLELIGQSLFDYVHPKDISKV
KEQLSASGLYPRERLIDAKSSPGSLAGLEVQELPVGAVQLCTGARRSFFCRMKHSRTVMK
TEDKTIQASSSKKKESQRYCTVHCTGYMRSWPSTQLDAESDDNESSHLSCLVAVCRVHPI
NACQPQREVKVKPTQFVTRFAIDGKFIFVDQQATTVLGYLPQELLGTSCYEYFHQDDLQH
LAETHRKVLRSKEKIETSCYKFKTKLGSFVMLQSQWFSFINPWTKEVEFIVSTNRVLGPG
HTETEQPSSSELLDEERKRTILIPGISSAMATMIYAGSIGTQIANELLDSNRVNCSPSSG
TSSPFCPSQDRSPMVSSHANMPNEEVTYSDTVSKSGSESASKGATYAGSNTHMDTAHSPP
GESSQMNLDSMVGPGLGILSNNEAAMAVIMSLLQTDANLGDAVDFDNMHWSH
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgctttgaaaaacaattttggttctcccccaaaatgtagatcaatggagcaa
acgcacactcgaagaagtcctaggacgcgcctgtggaagtttaataattttgaacatatt
tgtggcattttaccatgtaatttcgcaggacccttgcagttaggagaaaccaatagcctt
cctgtttctcggccttacgtcataacgccccacctggcaggagccatgcctgatgtcata
accccccacctggcaggagccatgcctgatgtcataaccccccacctggcaggatccttg
cctgatgtcataaccccccacaaggcaggagccatgcctgatgtcataaccccccacaag
gcaggagccatgccaatccaagagctgtctaggaaacggaagggggatctagataacagg
gaaaatggtgatgctcaaatagaggcgcaacagagcagatcggaagacgatgatcaacag
gtgaaaataaaatggttcagggagccacacagccaaattgaaaagcggcgaagggacaaa
atgaacacccttattgacgagctgtcagccatgatcccctcctggaaccccatggccaaa
aagcttgacaaactcacggttctgcgaatggctgtacagcatctgaaagccctgaaagca
ggtgccagcagttcctttactgatgttaactacaaacgcaagccttcatttctgcctcag
gatgatctcaagcacctggtgctcacggctgcagatgggttcctgttcgtggtgagttgt
gacagggggaagatcctctttacctcagaatccgtctccaagttcctcaactacagtcgg
ttggaactaattggacagagtctttttgattatgtccacccgaaggacattagtaaagtg
aaagagcagctgtcagcctcaggattataccctcgtgaacggctcatagatgccaaaagc
tctcccggttctttagcagggttagaggtgcaggagcttcctgtgggagcagttcaactg
tgtacaggggcacggcgctccttcttctgccgcatgaagcacagcagaacagttatgaag
acagaagacaaaaccatccaggccagcagctccaagaaaaaggagtctcaacgatactgc
actgtccattgcactggttacatgcggagttggccctccacccagctggatgctgagagc
gacgataacgagtcctcccatctgtcctgcctggttgctgtgtgccgcgttcaccctatc
aatgcctgtcagccccagcgagaggtcaaggtcaaacccacccagtttgtcactcgcttt
gcaattgacggcaagttcatcttcgtagaccaacaagccactactgttctgggctacttg
ccacaggaactactggggacgtcttgttatgagtacttccaccaggacgacctgcaacac
ctcgcagagacacataggaaagttctccgtagtaaagagaagattgagaccagctgctac
aagttcaaaacaaaacttggctccttcgtcatgcttcaaagtcagtggtttagttttata
aacccttggaccaaagaagtggagtttattgtgtcaacaaaccgagttttgggacctggt
cacacagaaactgaacagccgagcagctccgagctgttggacgaagagagaaaacgtact
atccttatccctggcatctccagtgccatggccactatgatctacgctggcagcataggg
acccagatagcaaatgagctcttggactccaacagggtcaattgttctccatcgagtgga
acctccagtcccttctgtccatctcaggacaggtctccaatggtctcctctcatgccaac
atgccaaatgaggaggtgacctactccgatacagtgagcaagtctggatcagagtctgct
tcaaagggggccacatacgctggcagcaacacacatatggacacagcccattctccccca
ggagagagctcccagatgaacctggacagcatggtgggaccaggcctcggtatcctgagc
aacaacgaggctgccatggccgtcatcatgagcctgctgcagactgatgccaacctgggg
gacgcagtagactttgacaacatgcactggtctcactag
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