Oncorhynchus nerka (sockeye salmon): 115107213
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Entry
115107213 CDS
T07952
Name
(RefSeq) breast cancer type 2 susceptibility protein-like
KO
K08775
breast cancer 2 susceptibility protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03440
Homologous recombination
one03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115107213
03460 Fanconi anemia pathway
115107213
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115107213
03036 Chromosome and associated proteins [BR:
one03036
]
115107213
03400 DNA repair and recombination proteins [BR:
one03400
]
115107213
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115107213
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
115107213
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
115107213
FA (Fanconi anemia) pathway
Downstream FA components
115107213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCA-2_helical
BRCA-2_OB3
BRCA2
BRCA-2_OB1
BRCA2DBD_OB2
BRCA2_TR2
Tower
Motif
Other DBs
NCBI-GeneID:
115107213
NCBI-ProteinID:
XP_029486501
LinkDB
All DBs
Position
LG23:23818611..23859708
Genome browser
AA seq
3195 aa
AA seq
DB search
MNIRRNMFDAFKDQIWEELGPLNPNWFEELTAKASSRDWGDTEKDNPSTAISCGQDGSFK
TPLGKCPLDGDMFSTPKIFRQRRLQSPETLIEDAVFFPDQGTSATEKMDTSPCLFGKSID
SGTPSKSYRTRLHGDSFGLLDTPKHSTAHSAKRISESLGAQLDPDMSWTSSLNTPVMSPT
IILTKSEEHSLMCPVRIATEEQVMFVRKLFPSAKESRSTMLSPEQNDRPLCQHNGLDSHL
PGVIDISPGFQDTLPGDSGSHWKQTLPDAIEDGEICSTMTGVVDGAEDVLSIFFSNKSLA
LQRVKTNERIKRKPSGATKEHVPTSTTEHDKVSSEGAGEYQHTRETSEPLESRTDMKSGD
LVTSQWTPINVPDFSGYDMDSFHHEGSSSTKHILPKGGKGETFRDFTGSQQEATVQVESA
LSRRTLLCTSQPEGSQLTGSVVESSLEHTFPRKTRTFVYCVQNPLLSVQEKYVTQMLPAS
PGTAPRGENQNMKQSKTIPDEAEFNNLNKTALDGKKPLVQKSAAEENIVSQAPSKDPDLD
MSQLCRVFAQDFSQVIDYSQPCSKRADAIKNGFSASACLSAMRLRNRKLLNRLEWGQKPE
HFNSGISDEMHIPGSQFSNSANTSRMKSTVCDSGFPPSTLSDVTQTESSNVHPSSEKSYG
NQSSRGFKTGNNWIISLPPEAIKKAKASLDYLIEENMTDLVTAASEVKPVLSCVTGSRLS
TEVKFISPLNIAKRSKQTSVKFNGQVHVPTHQSINVSVSSHPGSGFKMASNKKIHFFSAN
LEKDEDLFKEIEDEIPAVNIPEISLPEEGNMSCGLELVDGSHLPPLLYTRQRSVNSQGPL
TASQRADVSELCSLLEAADSQFEFTQFKPAKLNFYVPDGSPPRQSEKELDPDFLTGIDFD
DSFNSDVEKQSVKMVTPDKKITISHCKEICQVTTKIKSSGASSSNSTEKSKEHVIHRRVL
YIPSYSSENIAEHSFGLLTKSTNKNHLLDMDTNTSGMECERKNLPKLDVGFKTAGGNAMI
VSEKCLSKARALFADFEEKNCAPKCAVKNTEQVEISPVQYRGEVDTHVDSNVTHFHGPEK
KVDLKEPHDEYIDKIKVDFTHSHTHGDGGFQTASGKGVTISAKALQKTNAVFKDCDAMES
SGCASEKLSKTSVVSETGSNNFERNNCGFSTARGKRLDVSAKSLLTLLNDCGELENSKPG
KIPSLNAKIPSQNIQQKSDCDFKKPSIKAASISARIPFTAKTQFDSGMSHDVLGAKSKML
EPENSQTHAKDPLKNGCGFSTASGKMVSVSEGALLKAQALLSECNVDGEELSKSKKKIRV
DLHNPTQKQSGFKTAGVKEVTISPKAHKQAQALFNNCDFNMDSLISAEAKQGNIDVKSAD
GLMNNPGKSYCAFMTAGGENVHVSEKGILKAKSILNENLDNCTDSNAIEEAWFSDGRFLL
LTEDGTGVKKGARNKSNYSDLNGDEKSCDFSTAGGKTVHMSDGALQKAKSILNECDVIEN
PQPENGHNVHLEKIPTKETHEISHGSAASGKGVFISEKALQHVKSVYVLGETGNVKYSVG
SNPVGSHFGFSTASGKGLSVSEKALQEACDDTLARDTDPHKRSEENRPLKVPSPHINVQR
VPVKAVRLEDREVIQTIVGMECKSSSVECQAESSLLNFESLGFSGCSVTQRRYFAQEAMD
CTKALLEDEDLTDHCPGTPIQANPMSCKGGFEMRSGIWKRTAEDLGMTDQPPLKRKLLTK
FDRTVDCIRRSKLTPAKSSSDGIFKDRRVFKYNVALQPNVTRPYRANQRCVDTRLNKPEP
QKTTSDPTAEDRKPVGSKTAVFVPPFRKNVKLEPQGSSGLQDKTRAPGVFVSPFRKNNRL
TREGSFKPSEDNHSPFISEMPTKTTSVPLPEYKPITDTGSDNAKESIKDPQNIDKTDRGD
DCGHCLPVTLGGEDATAEESIAGQLAPDATGTLLDVVYDAECLQLARDMQDMRIRKKKRQ
TIRPLPGSLYLAKTSGVARLNLREAVGGWHPVQHTHKQLYGYGVHRHVWDISSESAEAFR
FVCRHFFRREAFVEGCIQLADGGWLIPRNDGTAGKHEFHRALCDSPGVDPKLISEDWVFN
HYRWVVWKRACMERAFPEVMGSLCLTPEQVLLQLKYRYDLEVDNSKRSALRKIMERDDTA
VKTLVLCVCGVVTKGHNPTRQSWSETKTKTPPGSAAGSKAKSSPVGLIWLTDGWYAIKAQ
LDVPLTAMLHRGRLAIGGKVLVHGAELVGSQDACSPLEAPDSLMLKIGANGTRAARWYTR
LGFYSNPSPFLLPLSSLYSNGGPVGCVDIVVLRSYPTQWMEKKSDGGFVFRAGRAEEREA
RRHGNAKHRAMEILFAKIQTQFEKEEDVTKPFPPTEHHPTVCGKPRGRRRTLRGRDMETL
LDGEELYDAVENDPVYLEGRLSEQQREALNSYRLCVGERRQEALQERFRQALESTQEGEG
RNCHNRDVTPIWKLHVADSRAKPGSNAVYLLNIWRPSMDLQSLLKEGCRYRAYHLSTSEG
KKRAGNTSIQLTATKKTQFQNLQASAGWLSEIFQAREAVGFRVLLNRDLKPLCGEVDLVG
YVISITDRQGHSPVVYLVDGWLDFVKVRCCSSLVQQGLEEVVKPLALVALSNLQLRAHPF
SPTPIRSAIPGLYAGDLVSFSTNPKEPHLQEAAAQLRTLVQGQEHFFRTAEERLSNLVQV
SVQCLPPLPWKAAKPDSRTTMTPQQSVRSVGPFTPLNSVVPPPPACFSGGDNKDPKSLKR
KRGRDYLCRIPLPLHTLPLGHHDITLAVRQQDFNTPRRTETHRILKTPLAPAPQHVHLPL
EDEWVEDEELVMIDTQALHDGIERDTHTPGSTDFHTTSRHHLQTPASRHRLPLTTSNTPK
ERAPSRSYISTSSLSLMECDHRSWTGLGQIHNHIWQWYIKNKSEQMDLTNSVDMLLPAGH
SPVVYLVDGWLDFVKVRCCSSLVQQGLEEVVKPLALVALSNLQLRAHPFSPTPIRSAIPG
LYAGDLVSFSTNPKEPHLQEAAAQLRTLVQGQEHFFRTAEERLSNLVQVSVQCLPPLPWK
AAKPDSRTTMTPQQSVRSVGPFTPLNSVVPPPPACFSGGDNKDPKSLKRKRGLDYLCRIP
SPPPLCPLGTMTLPSPCVNKTFNTPRRTETHRILKTPLAPAPQHVHLPLEDEWVEDEELV
MIDTQALHDGIERDT
NT seq
9588 nt
NT seq
+upstream
nt +downstream
nt
atgaacataaggagaaacatgtttgatgctttcaaggatcaaatatgggaagagttggga
cctctgaacccaaactggtttgaagagctcactgctaaagcttccagtcgggattggggt
gatacagagaaagataatcccagtactgcaatatcttgtggacaagatggcagtttcaaa
acaccattggggaaatgtccccttgatggtgatatgttctctaccccgaagattttcagg
cagagaagactacagtctcctgagacgttgatagaagatgcagtgttttttcctgatcaa
ggaacctctgcaactgaaaaaatggacacaagcccatgcttatttggaaaatcaatagac
agcgggacccctagtaaatcctatagaacaaggctgcatggagacagttttgggctgctt
gacacaccgaaacactctacggcacactctgccaaacgtatatctgaaagtcttggtgca
cagttagaccctgatatgtcctggaccagttctctcaatacacctgtcatgtcgcccacc
ataattttgactaaaagtgaggagcatagtcttatgtgcccagtaagaattgctacggaa
gagcaggttatgtttgtgcgaaagcttttcccttcggccaaggagtctagaagcacaatg
ctgtcaccagaacagaatgatagacctctctgtcaacacaatggactggattcccacttg
cctggtgtgattgacatctcccctggctttcaagacacgttacctggtgacagtggcagc
cattggaaacagactttaccagatgctattgaggacggagaaatctgcagcacaatgacc
ggtgtcgtagatggagccgaggatgtcctctccatattcttcagcaacaaaagtttggct
ttacaacgggtgaagaccaacgagagaatcaaaaggaagccaagtggcgcaactaaggaa
cacgtacctacttctacaacggaacatgacaaagtatccagtgagggagcaggagaatac
caacacaccagggaaacctctgagcctcttgagtccaggactgacatgaagtctggggat
ttggtgacttctcagtggactccaataaatgtacctgacttttcaggctatgatatggat
tcatttcaccatgaggggtcttcctctactaaacacatacttccaaaaggtggcaaaggt
gaaacattccgtgacttcactggaagccagcaggaagccactgtccaggtggagtctgct
ctttccagaagaacattactatgcaccagccagccagagggatctcaattgacagggtct
gtagtcgaaagctctctagaacacacctttcccaggaaaacaaggacatttgtttactgt
gtccaaaatccacttctgtcagtgcaagagaaatatgttactcagatgttacctgcatca
cctggaactgctcccagaggtgaaaatcagaacatgaaacaaagtaaaaccataccagat
gaagctgagtttaataatcttaacaaaactgccttggatgggaaaaagccgctagttcag
aaaagtgcagctgaagaaaatattgtttcacaagcaccaagcaaagaccctgatcttgat
atgtcacagctttgcagggtatttgcgcaagattttagccaagtaattgactacagtcaa
ccatgcagcaaaagagcagatgctattaaaaatggcttctctgcatcagcttgtctctca
gcaatgagactaaggaacagaaaactgttgaatagactagaatggggtcagaaacctgaa
cattttaactctggcatcagtgatgaaatgcatattcctggttctcagtttagcaactct
gcaaacacatctagaatgaagagtacagtgtgtgatagcggcttccccccctccaccctt
tctgatgtcacacaaacagaatcatccaacgttcaccctagctctgaaaaaagttatgga
aatcaatcatctagagggtttaaaacgggtaacaactggattatctctttgcctccagaa
gcaataaagaaagcgaaagcatcattagattacttaattgaggaaaatatgactgatctt
gttactgctgccagtgaagtgaaacctgtgttgtcatgtgtgacaggaagccgactgtcc
acagaagtgaagttcattagtccactcaacattgccaaaaggtcaaagcaaaccagcgta
aaatttaatggtcaagttcatgttccgacccatcagagcatcaatgtttcggtttcctca
caccctgggtctggtttcaaaatggcctccaataagaagatacattttttttcagcaaat
ctggagaaagacgaggatctgtttaaggagattgaggatgaaatacctgcagtcaatatt
cctgagataagccttcctgaggaaggtaacatgtcatgtggattggagcttgttgatgga
tctcatttaccacctctactctatacacgccagaggtctgttaatagccaaggtccattg
acagcctcacagagagctgatgtttcagaattgtgcagtctcttagaagctgcagacagc
caatttgagttcacacagtttaaaccagcaaagctgaacttttatgttccagatggtagc
ccccctcgtcaatctgagaaagaattggatcccgactttctcacaggcatagattttgat
gacagtttcaactctgatgttgagaagcaatctgtgaagatggtcacccctgacaaaaag
ataactatttctcattgcaaggaaatttgccaagtaaccaccaaaattaaatctagtggg
gcatcatccagcaattcaacagagaaatccaaagaacatgttatccacagaagagtactt
tacattcccagttatagctctgaaaacatagctgagcattcctttggtttgttgacaaaa
tccacaaacaagaaccatctactcgatatggatacgaacaccagtggaatggagtgtgaa
cgcaaaaatctccccaagttggatgtgggttttaaaactgctggcggaaatgctatgata
gtttcagagaagtgtctgagcaaagcaagggccttgtttgcagattttgaggaaaaaaac
tgtgcccccaagtgtgcagtgaaaaatacggaacaagttgaaatttcacctgttcaatat
agaggcgaagttgacacacatgttgattcaaatgtgacacattttcatggccctgaaaag
aaagtagatctgaaggaaccacatgatgaatacattgacaagattaaagtggactttaca
cattctcacacacatggggatggtggtttccagacagccagtggtaaaggggtgaccatc
tcggcaaaggcccttcaaaaaacaaatgcagtcttcaaagactgtgacgctatggaaagt
tcaggttgtgcgtcagaaaagctgagcaaaacaagtgttgtatcagagactggcagcaat
aattttgagagaaacaattgtggcttcagcactgctcgagggaagagacttgatgtttct
gcaaaatctctactgactctcctgaatgactgtggtgaattggaaaattctaagccaggg
aaaatccccagcttgaatgcaaagataccaagtcagaatattcagcagaaaagtgactgt
gattttaagaaacccagtattaaagcagcctctatatcagcaaggatcccttttacagca
aaaactcaatttgatagtggcatgtcacatgatgttctaggggcaaagagcaaaatgctt
gaaccagaaaattctcaaacccatgctaaagatcctttgaaaaatggatgtgggttcagc
actgccagtggtaaaatggtgtctgtgtcagaaggggcgctattgaaagcacaggctctt
ttgagtgaatgtaatgtagatggagaggaactttctaaatcaaagaaaaagatcagagta
gatcttcataacccaacacagaagcagagtggatttaagactgctggtgtcaaagaagtt
accatatcacctaaggcccataagcaagcacaggctcttttcaacaactgtgatttcaat
atggacagcttaatcagtgctgaagcaaagcaagggaatatagacgtaaagtctgctgat
ggtctgatgaacaatccagggaaaagctattgtgccttcatgacagctggtggagagaat
gtgcatgtatctgaaaaaggtattttgaaggcgaagagcattctgaatgaaaaccttgat
aactgcacagactcaaatgccattgaggaggcttggttttcagatggtagatttttgtta
ctcactgaagatggtacaggtgtcaaaaaaggagcaaggaacaaatcaaattattctgac
ctcaacggggatgaaaagagctgtgatttcagcactgccggtgggaagactgtgcatatg
tccgatggagcactccagaaagcaaagtctattctgaacgaatgtgatgtaattgaaaat
ccacaacctgagaatggccacaacgtgcatctggaaaagattccaacaaaggaaacgcat
gaaatctctcatggtagtgcagccagtgggaaaggggtgtttatttcagaaaaggctctt
cagcatgtgaagtctgtgtacgttctgggtgagactggtaatgtaaaatattcagttggc
agtaatccagtcggaagccattttggttttagcacagccagtggtaaaggactgtctgtt
tcagagaaggcacttcaagaagcgtgtgatgatacccttgccagggatactgaccctcac
aaaagatctgaagaaaataggccactgaaggtcccttctccccatattaatgttcagcgt
gtgccggtcaaagcagttcgactggaggaccgcgaagtgatccagaccattgttggaatg
gaatgtaagtcttcgtctgtagaatgtcaagcggagtcttccttgttaaattttgaatcc
cttggattcagtggctgctctgtgacccagaggaggtactttgcccaggaggccatggat
tgtaccaaggctcttttagaggacgaagacttgaccgatcattgtcctggaacaccaatc
caagctaaccccatgtcctgcaaggggggttttgagatgagaagtggaatttggaaaagg
acggcagaggatttagggatgacagaccagcctcctctgaaaagaaaactcttgaccaaa
ttcgacagaactgtggattgtattcgacggtcaaaactcactccagctaaaagcagttca
gatggtatatttaaagacaggagagtcttcaaatataatgtggctcttcaacctaatgtc
acgaggccatatcgcgctaatcagagatgtgtagacacaaggctgaataagcccgagcca
cagaagacaacgtcagatccaactgccgaagaccgtaaaccagttggctccaagacagct
gtatttgtccccccattccggaagaatgtcaagcttgagccacaggggagcagtggtctt
caggacaagactagagcgcctggtgtatttgtttccccgtttcgaaaaaacaaccgctta
accagggagggttcctttaagccttcagaagataatcattctcccttcatctctgaaatg
cctaccaagaccacatctgttccacttcctgagtacaaacccatcactgacactggtagt
gataacgcaaaggagtccattaaggacccacaaaatattgacaaaacggaccgaggtgat
gattgtggccattgccttcctgtcaccctaggaggagaggatgccactgcagaggagtct
attgcaggtcagctagcccctgatgccaccggtacccttctagatgttgtttatgatgca
gagtgcttgcagcttgcccgagacatgcaggacatgaggatcaggaagaagaagcggcag
accattagacctctccccggcagcctgtacctggccaagacatctggggtggccaggctg
aacctcagggaggctgttggaggttggcaccctgtacaacacacacacaaacagctgtat
ggctatggagtgcaccggcatgtttgggatatcagcagtgagagtgctgaggcgttccgc
tttgtttgccgacacttcttcagacgcgaggcgtttgtagaggggtgcattcagctggcc
gacgggggttggctcattcctcgcaacgatggaactgcagggaaacatgagttccacaga
gcgttgtgtgacagccctggcgtggaccccaagctgatcagtgaggactgggtgttcaac
cactaccgctgggtggtgtggaaacgggcctgcatggagagggcattcccagaggtgatg
ggcagcctctgtctcacaccagaacaggtgctcctacaactgaaatacaggtacgacttg
gaggtggacaacagcaagaggtcagctctaaggaagatcatggagagagacgacactgca
gtcaagaccctggtgctttgtgtatgtggtgttgtcaccaaaggccataacccaacaagg
cagagctggagtgagaccaagaccaaaaccccacccgggagcgccgcagggtctaaagcg
aagtcgtcccctgtaggcttgatctggctgactgatggctggtacgccatcaaggcccag
ctggacgtcccactgaccgccatgctccaccggggccgcctggcgattgggggaaaggtg
ctggtccacggggccgagttggtgggatctcaggatgcctgctccccactagaggctccc
gactccctcatgttgaagattggggccaacggcaccagagcggcgcgttggtacaccagg
ctagggttctacagcaaccctagtccgttcctcctccccctctcctccctctacagcaac
ggaggccccgtgggctgtgtggacattgtggtgctgaggagctaccctacccagtggatg
gagaagaagtcggatggagggtttgtgttccgcgcaggccgtgcagaggagagggaggca
cggcgtcatggcaacgccaaacacagagccatggagatactgttcgccaagatccagacc
cagtttgagaaggaggaggatgttacaaaaccttttccgcctactgaacatcacccaaca
gtttgcggtaaacccagaggccggagacggaccctgcgtggtcgagacatggagacactg
ctggacggggaggagctgtacgacgcggtggagaatgacccagtttatttggagggccgt
ctgagtgagcagcaacgggaggcgttgaacagctataggctttgtgttggtgagaggagg
caagaggcactgcaggagcggtttcgccaggctctggaaagcacccaggagggcgagggc
aggaactgtcacaaccgagacgtgacccccatctggaagctccacgtcgctgactccagg
gccaagccgggcagcaatgcagtgtacctgttgaatatctggcgcccctccatggatctg
cagtccttgctgaaggagggctgtcgatacagggcctaccacctatccacgtcggagggc
aagaaacgagccggtaatacctccattcagctcaccgccaccaagaaaacccagttccag
aatttacaggcttctgcagggtggttgtctgagattttccaagcccgagaggcggtcggc
tttcgcgttctcctgaaccgggacttaaagccgctctgtggagaggtggatctggtaggc
tacgtcatctccatcacagacagacaaggtcactctccagtggtgtatctagtggatggc
tggctggactttgtcaaggtgcgctgctgcagcagtctggtccagcagggcttggaggag
gtggtcaagcctctggctctggtggccctcagtaaccttcagctcagagcccatcccttc
tcccccacccccatccgcagcgccatccctggcctatatgctggagatctagtctcgttt
tccaccaaccctaaggagccacatctacaggaggctgctgctcaactcaggacccttgtc
cagggccaggaacacttcttcaggactgcagaggagaggttatctaacttagtccaggtg
tctgtccagtgtcttcctccgctgccatggaaagcagccaaaccagattcaaggactact
atgacaccccagcagtcagttcgaagcgttggccccttcacccctctgaacagcgtcgtc
ccccctccacccgcctgcttctcagggggggacaacaaagaccccaagagcttgaaaaga
aagaggggccgggactacctgtgtcgcatccctctccccctccacactctgccccttggg
caccatgacattaccctcgccgtgcgtcaacaagacttcaacacccctcgcaggactgag
acccaccggatcctaaagacacctctagcccccgctccacagcatgtccacctgccccta
gaggatgagtgggtggaggatgaagagctggtcatgattgacactcaggccttacacgat
ggcatagagagagacacccataccccaggttccacagacttccacaccacctcccgccac
cacctccaaacccctgcctcccgccaccgcctcccgctgaccaccagtaacacccccaaa
gagagggctcccagcaggtcctacatttccacaagttccctgtccctgatggaatgtgat
cacaggtcttggacaggtcttggacaaatacataaccatatatggcaatggtatatcaag
aacaagagtgaacagatggatttgaccaactctgttgacatgctgttgcctgcaggtcac
tctccagtggtgtatctagtggatggctggctggactttgtcaaggtgcgctgctgcagc
agtctggtccagcagggcttggaggaggtggtcaagcctctggctctggtggccctcagt
aaccttcagctcagagcccatcccttctcccccacccccatccgcagcgccatccctggc
ctatatgctggagatctagtctcgttttccaccaaccctaaggagccacatctacaggag
gctgctgctcaactcaggacccttgtccagggccaggaacacttcttcaggactgcagag
gagaggttatctaacttagtccaggtgtctgtccagtgtcttcctccgctgccatggaaa
gcagccaaaccagattcaaggactactatgacaccccagcagtcagttcgaagcgttggc
cccttcacccctctgaacagcgtcgtcccccctccacccgcctgcttctcagggggggac
aacaaagaccccaagagcttgaaaagaaagaggggcctggactacctgtgtcgcatcccc
tctccccctccactctgccccttgggcaccatgacattaccctcgccgtgcgtcaacaag
accttcaacacccctcgcaggactgagacccaccggatcctaaagacacctctagccccc
gctccacagcatgtccacctgcccctagaggatgagtgggtggaggatgaagagctggtc
atgattgacactcaggccttacacgatggcatagagagagacacgtga
DBGET
integrated database retrieval system