Oncorhynchus nerka (sockeye salmon): 115107340
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Entry
115107340 CDS
T07952
Name
(RefSeq) uncharacterized protein LOC115107340
KO
K24165
photoreceptor cilium actin regulator
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115107340
04812 Cytoskeleton proteins [BR:
one04812
]
115107340
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
115107340
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
115107340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Retinal
ArAE_1_C
Motif
Other DBs
NCBI-GeneID:
115107340
NCBI-ProteinID:
XP_029486599
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All DBs
Position
LG24:21423368..21428001
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AA seq
856 aa
AA seq
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MGCSPSKGQLFPGVADGIHKDPLPEPPKLGDIKPVEGENQDIDDMDIDKDLEEFSLSEVN
PMAPLGKVSDMAPNTAVVSNPGAVSEIEVKMTSQVRDIQSEKLLEKQVKKVEQRRKNKGV
KQGCRKEKEINTCIMQGKVDLPKHIVRAHQAAYKYLNPNISKCETLLEMLDQVAQTHLSL
QPIITVIVMLFEEVNQALEEMADDGELMLKEHGNHMAWPSETRAPYSIPAKPSADPSEPP
PDLLQQLLQDSTEKFKLVRSAVQGLGDTALEEAADYFASLSKLLGKRLRAKRVVEERLSQ
VLARVEAAAKCNLDDLSLHSEDSGIGGENESLTGSERQRRQRGSSGPGGSARPTPLSHSP
DKVCLNKSEEENEEVDDDEDEEDEERSGRVRSNSSSSDPIQTPKRSERQPPKQPQTAAPL
GRPVRPPHSLSIESFDVQELQQKDLDQRTGDDTLRRHSSGRRKVPRYELKGSAKANQTPT
SLPAIAPQPPGRNSVKRLINTFSGGTDVRQVQSLTSTHLRGSRRSETPGPPWPVEGREDL
DVDYLPPPPPEVLMDNSYESNEENPDDQGGEEEDITSRGHPVPHQTSTTCQRLRASLQTM
TVLPNRGSVGPIRQDTMVRGDHQATSLYSQACKIIHLRNATESTPTRPDQGVRGPLRAGV
SLRQGSSNHYGGEYYPTSMPPTIPTVYRVRLPPSCPSIQQELPIPPALSQPNPPSRPSSP
RVLRLSTEKSGEEDRSPSVSFNDARSVFCQNSQSNSQIWTPSCSSTLPRAYGEPSRGRLS
TRGSQTVSRRSQSDQRPSLMTQRDESLVPGTSQARIGGSASNITNNSERMVKGLVMEGEN
QSDPSDAAPTDLNPEQ
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgggctgttccccatccaagggtcagcttttccccggggtcgcagatgggatccacaag
gatccgctgccagaaccaccaaagttgggtgacatcaaaccggttgagggagaaaaccaa
gatattgacgatatggatattgacaaagatttagaggaattctcattatcagaggtgaat
cctatggcccctctgggcaaagtgtcggacatggcccccaacacagccgttgtgtcaaac
ccaggggctgtctctgaaatcgaggtcaaaatgacgtctcaggtgagagacatacagagt
gagaaattactggaaaagcaggtgaaaaaggtagagcagcgaaggaaaaataagggtgtc
aaacagggttgccgaaaagaaaaggagataaatacctgcatcatgcaggggaaggtggac
ctccccaaacacattgtgagagctcaccaggccgcctacaaatacctgaaccccaacatc
tccaagtgtgagaccctgctggagatgctggaccaggtcgcccagacccacctctccctg
cagcccatcataacagtcattgtaatgctcttcgaggaggtcaaccaggccctagaggag
atggctgatgatggtgagctgatgctgaaggaacatggcaaccacatggcctggccctct
gagacaagggccccatattccatccctgccaagcccagtgctgacccatcagaacccccg
ccagacctgctgcagcagctgctccaggattccactgaaaagtttaagctggtgaggagc
gcggtccaaggcctgggagacaccgcactggaagaggcggcagactactttgcctcgcta
tctaaactactgggcaagaggctgcgggccaagcgagtggtagaggagcgtctgagccag
gtgctggcacgcgtggaggcagccgccaagtgcaacctcgatgacttgtctcttcacagc
gaggacagcggcattgggggagagaatgagtcgctgacgggatcagagcgtcaacgtcgc
caacgggggagttctggacccggtggcagtgctcgccccacacccctaagccattcacct
gacaaggtatgccttaataaaagtgaggaggaaaatgaggaagtggatgatgatgaagat
gaggaggatgaagagaggtcagggagggtgcggtccaactcttcctcgtcagaccccatt
cagacccccaagcgcagtgagaggcagccacccaaacaaccccagaccgctgcccccttg
ggcaggccagtgagaccgccacactcactgtccatagaatctttcgatgttcaggagctg
caacagaaagatctggaccagcggacgggagacgacactctgaggagacactcttcagga
aggaggaaggttcctagatatgaactcaaagggtccgcgaaggcaaaccaaacaccaact
tctctaccagcgatagcaccacaaccccctggccgcaactccgtcaaaagactcataaac
acattcagtggtgggacggatgttagacaagtccaaagtctcactagtacacaccttagg
gggtctaggaggagtgaaactccaggtcctccctggccagtggaaggcagggaggaccta
gatgtggactacctgcccccacctccccctgaggtcctgatggacaactcctatgagagc
aacgaggagaacccggatgatcagggcggggaagaggaggacatcaccagtaggggccac
cctgtgccacaccaaacaagcaccacctgtcagcgcctgagggcctcgttgcagaccatg
acggttctgcccaaccgtggcagtgtcggaccaatcaggcaagataccatggtgagggga
gatcatcaggctacatcgctatacagtcaggcctgcaagatcatccacctgcgcaatgca
actgaatccactcctacgagacctgatcagggggttcgaggaccccttagagctggggtg
agcctcaggcaaggaagcagcaaccactatgggggggagtattaccccaccagcatgcca
ccaaccatcccaacagtctacagagttcgcctaccaccctcttgtccctctattcaacaa
gaactaccaatcccccctgctttatcacagcctaatccaccttcacgtccatcctcaccc
cgggtcctgagattgagcacagagaagagtggtgaagaagacaggtcaccctcagtgtcc
ttcaatgatgcccgatcagtgttctgtcaaaatagccaatcgaactcccagatctggacc
ccctcctgtagctctacgctacccagggcctatggtgagccctcccggggaaggctgtcc
acacgagggtcccagactgtcagtaggcgcagccagtctgaccagagacccagcctgatg
acacaacgagacgagtcccttgtcccaggcacatcacaggccaggattggaggaagtgcg
tcaaatatcaccaataacagtgagaggatggtcaagggtcttgtgatggaaggggagaac
caatcagatccaagtgatgctgctcctactgacttgaaccctgagcagtag
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