Oncorhynchus nerka (sockeye salmon): 115107461
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Entry
115107461 CDS
T07952
Name
(RefSeq) arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein 2-like
KO
K12488
Arf-GAP with SH3 domain, ANK repeat and PH domain-containing protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
115107461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115107461
Membrane trafficking [BR:
one04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
115107461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
BAR_3
Ank_2
PH
Ank
SH3_9
SH3_1
SH3_2
Ank_5
Ank_4
Ank_3
TerS_C
PH_9
Motif
Other DBs
NCBI-GeneID:
115107461
NCBI-ProteinID:
XP_029486712
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Position
LG24:4219994..4264688
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AA seq
1078 aa
AA seq
DB search
MPLPELITVTEFVAETNEDYKAPTTSNFTTRMSHCRNAVAALEEVGAGHGSVKTALDALD
ALDALDALDALDALDALDCFSAHVDHEEQYIQSMEKFGDNCVSREDPEVGSAFLKFAIFT
KELTALFKNLLQNMNNIITFPLDSLLKGDLKGVKGKTGIFFYFMPIPFSQSLIYVRKTSF
LPSFYACLLHSSCASSSLRPLCSCSTKIEKEKKEHAKQHGMIRTEFSGGEIAEEMEKERR
LFQLQMCEYLLKVNEIKTKKGVDFLQNLIKYFHAQCNFFQDGLNTVNSLKPSIEKLATDF
TIIKQTQDGERKQLSELRDVLKSSLQSEQKEDTQVKQTGYSLHQLQGNKAHGTERCGMLY
KKSEGLRKVWQKRKCSVKNGFLTISHGTANTPPAKLNLLTCQVKRNPDEKKSFDLFSHDR
TYHFQAEDEAECQIWISVLQNSKEEALNDAFKGDQDEGGENNIVQELTKAIVSEVKRMSG
NDVCCDCGAPNPTWLSTNLGVLICIECSGIHREMGVHYSRIQSLTLDVLGTSELLLAKNV
GNAGFNEIMEADLSAQSVTKPNPSSDMQTRKDYITAKYTEKRFAQRKCVDVASRLHFLCE
AVKTRDILSLIQVYAEGVDLMETIPLANEHEPGETALHLAVRMVDRNSLHIVDFLAQNSG
NLEKQTAKGSTALHYCCLTDNSECLKLLLRGRASVSIANEAGETPMDIAKRLKHTQCEEL
LTQAETGKFNVHVHVEYEWRLSNDDNLDESEDEMEDKPIPHRRSEQERPVSCFVPSSGLM
GPMPGGPNMASLARDAASLARDKQRAHLPSMIMNNETYGTILEPSPPPSGEPALPVVPTP
HLPPRTATKGPRWKQAPMEGVGRQRSSSDPPDPHTPDPNSSMYVLPPTAPPPPVNKRTNV
MEPRGHKTGPLPPLPPVLPGPPVPTVIPGAPVQPSAPPFKPTHPSPVPAHHPSRRATGPK
SPKSPTSSDKPTPKGPPTRTAGPTDGPVKTAPVAGSPHSSGPTPPTLKPRANHPKQKPKR
VKAIYNCSADNSDELTFTEGEVIVVDGEEDPEWWFGHMEREPTRRGVFPVKFVHFITD
NT seq
3237 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgccggagttgatcacggtcacggaatttgtggctgaaactaacgaggactac
aaagcgcccacaacctcgaatttcaccactagaatgtcccattgtcggaacgccgtggca
gcattagaagaggtgggtgcagggcatggcagtgtgaaaactgctctagatgctctagat
gctctagatgctctagatgctctagatgctctagatgctctagatgctctagattgtttc
tcagcccacgttgaccatgaggagcagtacattcagtctatggagaagttcggagacaac
tgtgtctctagagaggatccggaagtgggctcagccttcctcaagttcgccatctttacc
aaagagctcacagccctcttcaagaacctgttgcagaacatgaacaacatcatcaccttc
cccttagacagtctactgaaaggagacctgaaaggggtcaaagggaaaactggtatattt
ttctattttatgccaattcctttcagccaatctttaatatatgtcaggaaaacaagtttc
ctaccttccttttacgcttgtctcctccattcatcctgtgcttcatcatcactgagacct
ctgtgttcctgcagcactaaaatagagaaggagaagaaggagcatgctaagcagcatggg
atgatacggacagagttcagtggaggagagatcgctgaggagatggagaaggagagacgc
ctctttcagctccagatgtgtgagtatcttctcaaagtgaatgaaattaaaacgaagaag
ggggtcgactttctccagaacctcatcaaatatttccacgcccaatgcaactttttccag
gatggtctgaacacagtgaatagcctcaaaccttccatagagaaattggctacagacttt
actataatcaaacagacccaagatggagagaggaaacagcttagtgagctcagagacgtt
ctcaagtcctccctacagtctgaacagaaagaggatacccaggtcaagcagacaggatac
agccttcaccagctccaggggaataaggcccacggtacagaacgctgcggaatgctgtac
aagaagagtgagggtctcaggaaggtgtggcaaaagaggaagtgttcggtgaagaacggg
ttcctgactatctcccatggaacggctaacacaccaccagcaaaactcaacctgctaacc
tgtcaagtgaagcgtaacccggacgagaagaaaagctttgatctcttctcacatgacaga
acctatcactttcaagctgaggatgaggcagagtgtcagatatggatctcagtcctgcag
aacagtaaggaggaagccctgaacgatgccttcaaaggagaccaggacgagggaggggag
aacaacatagtccaggagctgaccaaggccatcgtcagcgaggtcaagaggatgagcggc
aacgatgtgtgctgcgactgcggagcgcccaatcccacctggctctccactaacctggga
gtgctcatctgcatcgagtgttctggaatccacagggagatgggcgtccactactctaga
atacagtctctcacactggacgtcctgggaacctcagagctcctgctggctaagaatgta
gggaacgcaggtttcaatgagatcatggaggcggacctgtctgcacagagcgtgactaaa
cccaacccctccagtgacatgcagacgaggaaggactacatcacagccaagtacacggag
aagcgttttgctcagaggaagtgtgtggacgtggcatccaggctgcacttcctgtgtgag
gcagtgaagacccgagacatcctctctctcatccaggtctatgctgaaggagtggacctg
atggagaccatcccgctggccaatgagcatgaaccgggtgagacagcactacacctagca
gtacgaatggtggaccgcaactccctccatattgtggacttcctggcccaaaatagtggg
aacctggagaagcagacagccaaagggagcacggcactgcactactgctgcctcaccgac
aacagtgagtgtctcaaactgctactgcggggcagggcctcagtcagtattgccaacgag
gcaggagaaacaccaatggacatcgccaagcgcctcaaacatacgcagtgtgaggagctg
ctgacccaggccgagacggggaagttcaacgtccacgtgcatgtggagtatgagtggcgg
ctcagcaacgacgacaacctggacgagagcgaagatgagatggaggacaagcccatcccc
cacagacggtcagagcaggaacgtcctgtcagctgtttcgtcccgagcagtggtctcatg
ggtccaatgcctggtggtcccaacatggcctccctggcccgtgatgcagccagcctggcc
agagacaagcagagagcccatctccccagcatgattatgaacaacgagacctatggcacc
atcctggaacccagcccccctccctccggcgagccagcgttaccggtggtacccacccct
caccttccccccaggacagccaccaaaggtccacggtggaagcaggctcctatggagggg
gtgggtagacagaggtcctcctcagaccccccagaccctcacaccccagaccccaacagc
tccatgtatgtgcttcctccaactgctccccctccccctgtgaacaagaggactaatgtg
atggagcctagaggccataagactggtcctctaccacctttacctccagtattacctggg
cctccagtgccaacggtcatcccaggagcaccagtccaaccatcagcaccccccttcaaa
cccacacacccctctcctgtccccgcacaccatcccagcaggagagccacagggcccaag
tcacctaaatcaccgactagttcagataaacccactcctaaaggacctcccaccagaact
gctggaccaactgatggaccagtaaagactgcacctgtagctggctcccctcacagctct
ggtcccacccctccaacactgaagccccgcgccaaccaccctaaacagaaacccaagaga
gtgaaagccatctacaactgttctgctgataactcagatgagttgacattcacagaggga
gaggtgatcgtagtggatggagaggaggacccggagtggtggtttggacatatggagcgg
gagccgaccaggagaggggtcttccctgtgaaatttgtacacttcatcactgactga
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