Oncorhynchus nerka (sockeye salmon): 115107557
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Entry
115107557 CDS
T07952
Symbol
pum2
Name
(RefSeq) pumilio homolog 2 isoform X1
KO
K17943
pumilio RNA-binding family
Organism
one
Oncorhynchus nerka (sockeye salmon)
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PUF
PUF_NOP9
Rad26-like_N
Motif
Other DBs
NCBI-GeneID:
115107557
NCBI-ProteinID:
XP_029486820
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Position
LG24:2431428..2456243
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AA seq
1216 aa
AA seq
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MSVPCSILGMNDVAWQETRGGMLHTNGAPEAGGVRVHGGGSLAAMGVAGQGPGGPHRLQG
PNPIPGTPQPPLSGRSQDDATVGYFFQRQPGEQLGGCTSSKHRWPTGDGNHVDQVRTVDE
MNYGFQALALESRGMGELLPAKKLWDSDDLSKDGRKGMLLGEEWRENAWGSSHHSVSQPI
MVQRRPGQGFHGNGDANSVLSPRSEGGGLGVSMVEYVLSSSPGDKMDGRYRNGGYCGGDA
DPDGREKGNAQDQTSPFEEDKSPEMKVGEESDAAKANGRGLLNGMDRDCKDFNPTPGSRQ
ASPTEAVERMGPGQAGLEMMVQQHQHQQHHLQHQTMQPQNKPQQQEDFQSQEAQNMGNME
QQQGVESLQFDYAGNQIQVDSSGTPVGLFDYNSQQQLFQRSNHLTVQQLTAAQQQQYALA
AAQQQHLAGLAPAFVPNPYIINTGPPGTDPYTAAGLAAAATLAGPTVVPPQYYGVPWGVY
PANLFQQQAASHNANQQGSNQGPGPGQQQVMRPGNNQRPLTPGQGQQSQQESLAAAAAAN
PALAYAGMPVCLSPAHPGYQMLAPAAYYDQNGTLVMAPGARGGLGGPVRLVQTPLLINPQ
AAAQAAAAASASGSGNNMSGPQPNGLYRSMSQPQQQPQQQQNQGLPSSSFYGSGSVPASS
QSSSLFSHTSQAPPPTSSLGFSGAGGSLGVGLGSALGGFGSSVSSSTSSSVSRRDSLLAN
SDLYKRGGGSSLTPIGQPFYNSLGYSSPSPIGLTPGHSPLTPPPSLPSSHGSSSSLHLGG
LTNGSGRYISAAPGAEAKYRSAGGTSSLFSSSSQLFPPSRPRYSRSDVMPSGRSRLLEDF
RNNRFPNLQLRDLPGHMVEFSQDQHGSRFIQQKLERATPAERQMVFGEILQAAYQLMTDV
FGNYVIQKFFEFGSADQKLALATRIRGHVLPLALQMYGCRVIQKALESISSDQQVISDIV
RELDGHVLKCVKDQNGNHVVQKCIECVQPQALQFIIDAFQGQVFVLSTHPYGCRVIQRIL
EHCTQEQTLPILEELHQHSEQLGQKYQGVSLEMTPKTYYTVSSDALFKDQYGNYVIQHVL
EHGRPEDKSKIVAEVRGKVLLLSQHKFASNVVEKCVIHSSRAERALLIDEVCCQKDGPHS
ALYTMMKDQYANYVVQRMIDMAEPAQRKIIMHKIRPHIATLRKYTYGKHILAKLEKYYMK
SSSDLGPIGGPTNGLM
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgagcgttccatgcagcatcctaggtatgaatgacgtggcctggcaggagacacgaggc
gggatgctgcacacaaacggtgctcctgaagccgggggcgtcagagttcacggaggggga
tccctggctgccatgggggttgcaggtcagggtcccggagggccacaccgtctgcaggga
cccaaccccatcccaggcaccccacagcctccactaagtgggcgctctcaggatgatgcc
acagtgggctacttcttccagaggcagcctggggaacagctgggaggttgcacctccagc
aagcaccgttggcccactggagacggcaaccacgttgaccaggttcgaactgtggatgag
atgaactatggttttcaagcccttgctttggagtccaggggcatgggtgagctcctgcca
gcaaaaaaactgtgggattcggatgacttgtccaaggatggaaggaaagggatgctcctt
ggagaggaatggcgggagaatgcttggggatcttctcatcactctgtgtcccaaccaatc
atggtgcagcgacgacccggacagggtttccatgggaacggcgacgccaactccgtgctc
tcccctcgctctgagggcggaggcctgggcgtgagcatggtggagtacgtcctgagctcc
tcccccggggacaagatggatggccgctacaggaacggtggctactgcggcggggacgct
gacccagacgggagggagaaaggtaacgcccaagatcagacatccccgtttgaagaggac
aagagcccagaaatgaaagtgggagaggagagtgatgcggccaaggccaatgggagaggc
ctgctcaatggcatggacagagactgcaaagacttcaatcccaccccaggaagtcgccag
gcctcccccaccgaggcggtggagaggatgggccccggccaggccgggctggagatgatg
gtccagcagcaccagcatcagcaacaccacctccagcaccagaccatgcagccccagaac
aagccccagcagcaggaggacttccagagccaggaggcccagaacatgggcaacatggag
cagcagcagggtgtggagtcactccagttcgactacgctggcaaccagatccaggtagac
tcctccggcacccccgtcggcctgtttgactacaactcccagcagcagttgttccagagg
tccaaccatctgactgtccagcagctcactgctgcccagcagcaacagtatgccctggct
gctgcccagcaacaacaccttgccggccttgctcccgcgttcgtgccaaacccatacatc
atcaacactggaccccccggaaccgacccttacaccgctgcaggactggccgcagcagct
acacttgccgggcctacagtggttcctccccagtactatggtgttccttggggcgtgtac
cctgccaacctcttccagcaacaggctgccagtcacaacgctaaccagcagggatccaat
caaggaccggggccaggacagcaacaggtgatgcgccccgggaacaaccagcgccctctc
acccctggtcagggccagcagagccagcaggagtctctggcagcagctgccgctgccaac
cctgccctcgcctacgctggtatgccagtttgtctgtctcctgcccacccaggttaccag
atgctggcccccgccgcttactacgaccagaacggaaccctggtgatggcccctggggcc
cgcggtggtctaggagggcccgtccgcctggtccaaaccccgctcctcatcaacccacag
gccgcagcgcaggctgcggctgcggcgtcagcgtccggctcgggcaacaacatgtcaggc
ccccagcccaacggcctgtaccgctccatgtcccaaccccagcagcagccccagcagcag
cagaaccagggcctaccctccagctccttctacggctctgggtcggtgccggccagctcc
cagagcagctccctgttctcccacacctcccaggctccaccgcccacctcgtctctagga
ttcagcggtgccggcggctccctgggcgtgggcctgggctcggcgctcggaggcttcggc
tcctccgtgtcgagctccaccagcagcagtgtctctcgccgggactccctgctggccaac
tcggacctgtacaagcgtggcggtggtagcagcctcacccccattggtcagcccttctac
aacagcctgggctactcctcgcccagtcccattggcctaacaccgggccactcccccctc
acacccccaccctctctgccctcctctcatggctcctcctccagtcttcacctgggcggc
ctgacgaacggtagcgggcgctacatctcggcggcgcccggtgcggaggccaagtaccgc
agtgcggggggcacctccagcctgttcagctccagcagccagctgttcccgccgtctcgg
ccccgctacagccgctcagacgtcatgcccagcgggcgcagccgcctgctggaggacttc
cgcaacaaccgcttccccaacctgcagctgcgtgacctgcccggccacatggtggagttc
tcccaggaccagcacggctccaggttcatccaacagaagctggagagggccaccccagca
gagagacagatggtgtttggggagatcctgcaagcagcctaccagctgatgacagacgtg
tttggcaactacgtcatccagaagttctttgagtttggcagtgcggatcagaagctggct
ctggccacgcgtatccgcggccatgtgctgcccctggccctgcagatgtacggctgccgg
gtcatccagaaggccctggagtctatctcctctgaccagcaggtaattagtgacatcgta
cgagaactggacggccacgtgctgaagtgtgtgaaggatcagaacgggaaccatgtggtg
cagaagtgtatcgagtgtgtccagccccaggccctgcagttcatcatcgacgccttccag
ggccaggtgtttgtgctgtccacccacccttacggctgcagggtgattcagaggatcctg
gagcactgcacccaggagcagaccctgcccatcctggaggagctgcaccagcactctgag
cagctcggccagaaatatcaaggcgtttcattggagatgacacccaaaacatattataca
gtttccagcgacgcactgtttaaggatcagtacggcaactacgtcatccagcatgtcctg
gagcacggcagacccgaagataagagcaaaattgtggcagaggtccgtggaaaagtgctc
ctcctgagccagcacaaatttgcaagtaacgtggtggagaagtgcgtgatccactcgtcc
cgtgccgagcgggccctgctgattgacgaggtgtgctgccagaaggacggcccccacagc
gccctgtacaccatgatgaaggaccagtatgccaactacgtggtgcagcggatgatcgac
atggccgagcccgcccagcgcaagatcatcatgcacaagatccggccccacattgccacc
ctgcgcaagtacacctacggcaagcacatcctggccaagctagagaaatactacatgaag
agtagctctgacctggggcccatcggagggcccaccaacggcctcatgtag
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integrated database retrieval system