KEGG   Oncorhynchus nerka (sockeye salmon): 115107560
Entry
115107560         CDS       T07952                                 
Name
(RefSeq) syndecan-1-like
  KO
K06257  syndecan 1
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04512  ECM-receptor interaction
one04514  Cell adhesion molecule (CAM) interaction
one04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115107560
   04514 Cell adhesion molecule (CAM) interaction
    115107560
 09140 Cellular Processes
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    115107560
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115107560
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:one04090]
    115107560
   00535 Proteoglycans [BR:one00535]
    115107560
Membrane trafficking [BR:one04131]
 Exocytosis
  Calcium ion-dependent exocytosis
   Acrosomal exocytosis proteins
    115107560
CD molecules [BR:one04090]
 Proteins
  115107560
Proteoglycans [BR:one00535]
 Cell surface proteoglycans
  Syndecan family (transmembrane HSPG)
   115107560
SSDB
Motif
Pfam: Syndecan I-set
Other DBs
NCBI-GeneID: 115107560
NCBI-ProteinID: XP_029486830
LinkDB
Position
LG24:2456353..2460257
AA seq 191 aa
MRTLVISTLLFAMGTCLPAITTSYSIPPEDLDGSGHDLESSGSGSGERAEVSKGSVRFTT
ISTFTMTMSEDDLMFNAIDEEDKTIPIIMTDNTRNKISEDSDLTFDKRPKLDDNNGSAIG
NVAKSGGLLANKEALAAIIAGGVVGLALAASLLTLMVYNMKKKDEGGYTVNQKNTSNGGY
QKPKTKEEFIA
NT seq 576 nt   +upstreamnt  +downstreamnt
atgaggactttagtgatttccactttactgtttgctatgggcacatgtttacctgcaata
accacatcgtattctattcctccagaagacctggatggatcgggacatgatctggaaagt
tctggctcaggttcaggggaacgggcagaagtgtccaaaggctcagtgaggtttaccact
atctcaacatttacaatgacaatgagtgaagatgacttaatgttcaatgccattgatgaa
gaggataaaaccatcccaattataatgacagacaacaccagaaataaaatatcagaggac
tcagacttgacctttgacaaaaggcctaagctagatgacaacaacggatcagccattggc
aatgtggcaaagagcgggggtcttctagcaaacaaagaagctcttgcagctattattgca
ggaggagtggtgggactggccttggctgcctccctgttaacactcatggtctataacatg
aagaagaaagatgaaggaggctacactgtcaaccagaaaaacacatctaacggaggatat
cagaaaccgaagaccaaggaggagtttattgcctaa

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