Oncorhynchus nerka (sockeye salmon): 115107593
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Entry
115107593 CDS
T07952
Name
(RefSeq) transport and Golgi organization protein 1 homolog isoform X1
KO
K23704
transport and golgi organization protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115107593
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Src homology (SH) domain-containing proteins
Other SH2 and SH3-containing proteins
115107593
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SH3_2
Motif
Other DBs
NCBI-GeneID:
115107593
NCBI-ProteinID:
XP_029486881
LinkDB
All DBs
Position
LG24:3469684..3489341
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AA seq
1933 aa
AA seq
DB search
MAVNVSHVYILLLFIINFISNAATERRFSDFKRCADEECSMLLCRGKASSDFTGPDCRFL
SFKKGETVYVYYKLSGRRTDIWAGTVGSRFGYFHKDQLAINHIYTEKELEIPAQETDFVC
FDTGHDQFDSYDIESLLVSSLLLTDQDKSVQGTTETLDRNKSAESTTVEVDEPPPEVTLL
ENNEIDSDVPEDIDKVLEEVLEEFPEDKDPGHVDPLESSLPQPEIETLDAKGVESNTVVE
PTAERIKDDLQKYQLRTEDSVPDSVVEPEQGETKESLSEPLSKDDPELENAPAGFSEGRP
IPQLKTTLGTTFDAVTSDDEETRKVTPYDEEDKGSEEFEYQQDEKSDYHLRETPLLAFSE
EHSNLEHEDIDKVLEEVSEEFPEDKDPGHFESDQTDEEESPPETAEKQDSKDKNLWSSLG
DTVFNIVSGGERTAHVTGSEEEDDDDDDEGEIAPEEPPKIEEPKENIQLLANDPKQEPEG
TEQPHEVIFEEPVVSNFLEAAVKMPDVDSQTLQLEDEPEEGDIEPSIPLADEVIPFEHTE
EAIAENLTVNESPVPKHVSQTEMLSDFDSNTIDSEQTQAVEELPIQKEPKENIQLLANDP
KQEPEVTEQPHEDIFEEPIDSDFLEAVKMPNVDSQTLQLEDEPEEGDIEPSIPPADEVIP
FEHTEEALAENLTVNESPVPKHVSQTELLSDFDSKTNVSEQKQAIELPIQKESRDFSQVE
NKLKPGGTELFRRFRGPNVPDPTKNTMVKERHEELPVDEEDLIDSENLEIEEELLEDENA
ALSSSKTEHTDKDKESRSEFGSEQSNNATETEVSSDELDVVQIEEDIDIEDSESAGLDQT
HTPSLEDKVPDPLSGQEPEYSDNVLRLTLLRYHFKEQDMKLFQKILGLQNLFRVEFLFSD
LEQELNAALMSQTNTSEDIEKVLEAILEASETPILDEIERMLDARENADVQQETGELDVE
ATILDNFQELAFTLHQKYSMTSDSAPLAEGSQLHPDTDGDVSDAEEEKTFLHSVGDINED
NLTLTVTGEETKAPEEKPDHEGHNRPDLDMDLEEDVGHFNRNQDNQPEEIQRGPQAILEN
TLDMGLVDMEHPSSGSLESPPVSDFQEEEQSSSSIVSVLIFSGSLVTVVYEYLGIYAVMM
VTCLPEEWKPGPDFYGVSWEPVLATAGAGFIGFLFLFWRSVLSVKRKSYLTTEKEMADRM
KTFEQEKEEILLKVAELQQQGEELKEKKKLSEKSATSSLEKIQELKNLVQEMERQNERLD
EEKNLLARSFDEEQTKAAKHQDMMSEMDKTIEKLKRSRKKTQEALSKATILMEEAKLRED
ARNVQHQVLEKDIATLREENISLHHAANSWEEKHRELSEQIKVYQKSQKDLEDSLAQKDH
NVEVLSDLLGDLEACDDLKGGVVANGEAANDKQTVIRNRIKQMMDVTRVQTTLSVVEEER
DRFMTKLLNEEKARKELEEQYQKLDHAILLVKSDKNHLENQYKTLQQKNEIITEMYQQKE
NALQQKLTKEEFERRNNEDRLTEVDGKALEAEEEVKVCRQRIKEIQDELKQTEKSYKAQI
IEQEQKSHENWVIARAAERALLDEKKESTNLRIKLTEMSSKLNELRRPLFKPTPGMAPMP
LRRGDSYGPSPVSGGAPSPPLMMEGPGRPPSAPVGRRNEPYGPRPPSDPHGRYPPDHKHP
VAARPDTIAPRTSSPSSLDSSQTAPPQSQAEAQASTENPEANSGPRGPGSLLASPISSPP
DSGPGPLRPVISHPSGLCYRPPGPGPHHIPPPSSFMPPMYRPANGHPGMMPPGPPPPNGH
PPGPMMPPGQRPPPPGAYGPPHHRGPPPPHYGPVPPPFGVRGGPPMARPMGPPRPYMHYG
PRDHSIPPQHLPPGAAPYPPHSGPRDFPGQPPMQQAPHGHDSSVGPQGQDYSSQQAAATP
QPQDSVSSSMGEP
NT seq
5802 nt
NT seq
+upstream
nt +downstream
nt
atggctgtaaatgtatctcatgtatacattttacttttatttattattaatttcatatcc
aatgccgccaccgaaaggagattctccgacttcaaacgatgtgctgacgaagaatgcagt
atgctcctgtgccgggggaaagcatcaagtgatttcactggaccagactgtcggttcctg
tcttttaaaaaaggagagacggtatatgtctactataaactctcaggcagaaggacagat
atatgggcggggactgttggtagccgctttggttacttccataaggaccaactcgcaatc
aatcacatatacactgaaaaagaattggagattcctgctcaggaaaccgactttgtttgt
tttgacaccggacacgatcagtttgacagttatgacattgagtcactgttagtctcctcc
ttattgttaacggaccaagacaagtctgtacaaggaaccacagagactttagaccgaaac
aaaagtgcagagagtaccacagtggaagtggatgagcctccacctgaagtgactctgtta
gaaaacaatgagattgatagtgatgttcctgaggacattgataaggttttagaagaggtt
ttagaggaatttccagaggataaagatccaggccatgttgatcctttagagtcctctcta
cctcagcctgaaattgaaactcttgacgcaaaaggagttgaatctaacacagtagttgag
cccacagctgagaggatcaaagatgaccttcagaaatatcagctgaggactgaggactct
gtgccggacagtgttgttgaaccagagcaaggtgagactaaagaaagcctttcagaacct
ctatccaaagatgatcctgagttggagaatgcgccagctggtttttcagaaggcagacct
atccctcagttgaaaactacacttggaacaacttttgatgctgtcacctccgatgacgag
gaaactaggaaggtgactccctatgacgaggaggacaagggaagtgaagagtttgaatat
cagcaggatgagaaaagtgattatcatcttagggaaactccattgctggctttttctgaa
gaacattctaatttagaacacgaagacattgataaggttttagaagaggtttcagaggag
tttccagaggataaagatccaggccattttgaatctgatcagacagatgaggaagagagt
ccaccagagacagctgaaaaacaggactccaaggacaagaacctgtggtcttcattaggt
gatacagtttttaacattgtcagtggtggggaaagaacagctcatgttacaggttcagag
gaagaggacgacgacgatgacgacgaaggtgagattgcaccagaggagcctcccaaaatt
gaagaacccaaggagaatatacagctgctagccaacgacccaaagcaggagccagaggga
acagaacagccacatgaggtcatctttgaggaacctgtagtttctaatttccttgaggcg
gctgtcaaaatgcctgatgtggattcccagactttgcagttggaggatgaacctgaagaa
ggggacattgaaccttcaataccgcttgctgatgaggtgattccttttgaacatactgag
gaggctatagcagagaatcttacagtaaatgaaagcccagtccctaaacacgtctcgcag
acagaaatgctctcagactttgatagtaatactatcgactcagaacagacgcaagctgtt
gaagaactccccatacaaaaagaacccaaggagaatatacagctgctagccaacgaccca
aagcaggagccagaggtaacagaacagccacacgaggacatatttgaggaacctatagac
tctgatttccttgaggctgtcaaaatgcctaatgtggattcccagactttgcagttggag
gatgaacctgaagaaggggacattgaaccttcaataccgcctgctgatgaggtgattcct
tttgaacatactgaggaggctttagcagagaatcttacagtaaatgaaagcccagtccct
aaacacgtctcacagacagaactgctctcagactttgatagtaaaactaacgtatcagag
cagaaacaagctattgaactccctatacaaaaagagtcgagagatttctcacaagtagag
aataaattgaaaccgggtggtacagagcttttcagacgatttagaggacctaacgtccca
gatccaactaaaaacacaatggttaaagagcggcatgaagaactccctgtagatgaggag
gatttgatagactcagagaacttggagattgaagaagaattgctagaggatgaaaatgca
gcattgtcttcatccaaaaccgagcacactgataaggacaaagaaagtagatcggaattt
gggtcagagcaatccaataatgctacagaaaccgaggtatctagtgatgagttggatgtt
gtccaaattgaggaggatattgacatagaagattcagaaagcgcaggcttggatcaaaca
catacaccttcacttgaagacaaagttccggatcccctttcaggccaagagccagaatac
agtgataatgtgttgaggctgacgctactgcgctaccacttcaaggaacaggatatgaag
ctcttccagaagattctgggtcttcagaacctcttcagggtggagttcttgttctctgac
cttgagcaggagctgaatgctgccctgatgtcacagacaaacaccagtgaggacattgaa
aaggtgctggaggccattttggaggcctctgagaccccaatcctggatgagattgagagg
atgctggatgcccgggagaatgctgacgtacagcaggagactggtgagcttgatgtggaa
gccaccatcttggacaacttccaagagttggcgttcaccctgcatcagaagtattcaatg
accagcgacagtgctcccttggcagagggcagtcaactacaccctgacaccgatggggat
gtgtctgatgcagaggaagaaaagacgttcctgcactctgtgggggacataaacgaggac
aacctcactctgacggtgacaggtgaagagactaaggcacctgaggagaagcctgaccat
gaaggccacaacagaccagatctggatatggatcttgaggaggatgtggggcattttaac
agaaaccaagacaatcaaccagaagaaatccagaggggccctcaagctattttggaaaat
accttggacatgggacttgttgacatggagcacccttcctcaggctctttggagtcgccc
cctgtttctgatttccaggaagaggagcagagtagttcatcaatcgtatcggtgttaatt
ttctctggtagtctagtcaccgtggtttatgagtaccttggaatatatgctgttatgatg
gtcacctgcctgccagaggaatggaagccaggtccagacttttatggcgtgtcctgggaa
cccgtgctggccactgcaggcgccgggttcatcggcttcctcttcctcttttggaggagt
gttctatctgtcaaaaggaagtcctatctaactactgaaaaagagatggcagacaggatg
aaaacatttgaacaagaaaaggaggagatactcctaaaggttgctgaactgcaacaacag
ggtgaagaactcaaagaaaagaaaaagctgtctgagaaatctgccacctcatctctagaa
aagatccaagaattaaaaaatcttgtgcaagagatggagagacaaaatgagcgcctggac
gaggaaaagaacttgctcgccagatcctttgacgaagagcagacaaaggcggcgaaacat
caagatatgatgtcagaaatggacaaaactattgagaagttgaagcggagcagaaagaag
actcaggaggctctctcaaaggctaccattctgatggaagaagccaagctccgcgaagat
gcacggaacgtccagcaccaggttctggagaaggatatcgccaccctgagagaggagaac
atctcgctgcaccacgctgccaattcgtgggaggagaagcacagggagttgagcgagcag
atcaaagtctaccagaagtcccagaaagacctggaggactcccttgctcagaaggatcac
aacgttgaggttttgtctgacctcctgggagacctcgaggcctgcgacgacctgaaagga
ggcgtcgtggctaacggggaagccgctaacgacaagcagaccgtcatccgaaaccgcatt
aagcaaatgatggatgtcactcgggtccagaccactctgtctgttgtggaggaagagcgc
gaccgcttcatgaccaagctgctgaatgaagagaaagccaggaaagagctggaagaacaa
taccagaagctggatcatgccatcttgttggtgaaaagtgataagaaccacctggagaac
cagtacaagaccctgcagcagaagaacgagatcatcacagagatgtaccagcagaaggag
aacgccttgcagcagaagctaaccaaggaggagtttgagcgtcgcaacaacgaggatagg
ctgactgaggtggacggcaaggctctggaggctgaggaggaggtcaaggtgtgcaggcag
cgtatcaaggagatccaggatgagctgaaacagactgaaaagtcctacaaagcccagatc
attgagcaggaacagaaatcccatgagaactgggttattgcacgcgccgcagagcgagct
ctgttggacgagaaaaaggaatcaaccaacctccgtatcaaactgactgagatgtccagc
aagctgaatgagctccgtaggcctctattcaaacccacccctggaatggctcccatgcct
ctccgacgaggtgactcgtacgggccctcgcccgtgagcggaggtgccccgtccccccct
ctcatgatggagggtcctgggcgacccccctctgcccctgtggggagacggaacgagccc
tacggaccacgacctccatctgaccctcacggtcgttacccccctgaccacaaacaccca
gtggctgccagacctgacaccattgcaccacggacatcctctccaagcagtctggacagc
tcgcagaccgctccaccacagtcacaggctgaggcccaggcctccacagagaacccagag
gcaaactcaggacctcggggccctggctccctcctggcctctcctatcagctcccccccc
gactcaggccccggccccctcagaccagttatcagccatccctccggactctgctaccgt
cctcctggccctgggccccaccacatccctcctccctcatccttcatgcctcccatgtac
cgaccagccaacggacacccaggcatgatgcctcccggacccccaccacctaatggacac
ccacctggccccatgatgccacccggacagcggcctccacctcctggtgcctacggcccc
ccacaccaccggggccctcctccacctcactatggaccagtgcctcccccattcggtgtt
cgcggcggcccccctatggcccgacccatgggaccaccacgtccctacatgcactacgga
ccacgtgatcactccatcccaccccagcaccttcccccaggagcggccccataccctcct
cacagtggccccagagacttccccgggcagccccccatgcagcaggccccccatgggcat
gactcttctgtgggtccccaggggcaagactacagctcccagcaggcagcagctaccccc
cagccccaggactcagtcagctcctccatgggagagccttag
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