Oncorhynchus nerka (sockeye salmon): 115107652
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Entry
115107652 CDS
T07952
Name
(RefSeq) gamma-aminobutyric acid receptor subunit rho-1-like
KO
K05190
gamma-aminobutyric acid receptor subunit rho
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04080
Neuroactive ligand-receptor interaction
one04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
115107652
04082 Neuroactive ligand signaling
115107652
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115107652
Ion channels [BR:
one04040
]
Ligand-gated channels
GABA-A
115107652
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Ortholog
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Gene cluster
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_GpJ_C
Motif
Other DBs
NCBI-GeneID:
115107652
NCBI-ProteinID:
XP_029486992
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Position
LG24:complement(6275595..6305990)
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AA seq
474 aa
AA seq
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MSTDVLLLLLFVWMVGASGRSIGPRGHVRQTYSQIRFKREVPSTVQGRQKVSSPILRRSP
DMTKTTMTKSEQLLSINDHDFTMRPGFGGHTVQVGVDVQVESLDTISEVDMDFTMTLYIR
HYWKDERLSFHSTTNKSMTFDGRLVKKIWVPDLFFVHSKRSFTHDTTTDNVMLRVYPDGK
VLYSLRVTVTSMCSMDLSRFPLDTQTCSLEIESYAYTDDDLMLYWKKGNNSLSTDERISL
SQFLIQEFHTTSKKSFYSSTGWYNRLYINFTLRRHIFFFLLQTYFPATLMVMLSWVSFWI
DRRAVPARVPLGITTVLTMSTIITGVNASMPRVSYIKAVDIYLWVSFVFVFLSVIEYAAV
NYLSTVQERKERKLRERLPCTCGMTHPGMMGSYSEDDVNNTGNYGGESMENGAAMQQRMM
VHLDFEENDQITGHVGSSAYSSMWIDTHAIDKYSRVIFPGSYILFNIIYWSCYL
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtccacggatgtcctacttctgctgctatttgtctggatggtcggtgcttctgggagg
tcaattggtccgaggggacacgtgcgccagacctacagccaaatcagattcaaacgagaa
gtaccatcgactgtacaaggacgtcaaaaagttagcagccctatactgagaagaagtcca
gatatgaccaaaaccaccatgacaaagtcagagcagctcttaagcataaatgaccacgac
ttcacaatgaggcctggctttggaggacacactgttcaagttggagttgatgttcaggta
gagagtctggacacaatttcagaagttgacatggacttcaccatgaccctgtatattagg
cactactggaaagatgagcgcctttctttccacagcaccaccaataagagcatgaccttt
gacgggcgcctggtcaagaagatctgggtgcctgacctgttctttgtccactccaagagg
tctttcacacacgacaccaccacagataatgtcatgctgagagtctaccctgatggcaag
gtgctctacagcttaagggtgacggtgacatccatgtgcagtatggacctgagtcgcttc
cctctggacacacagacctgctccctggagatcgagagctatgcgtacacagatgacgac
ctgatgctctactggaagaaagggaacaattccctgagtaccgacgaaaggatctccctc
tcccagttcctcatccaggagttccataccaccagcaaaaaatccttctacagcagcaca
ggctggtacaaccgtctgtacatcaacttcaccctgcgacgccacatcttcttcttcctg
ctgcagacctacttccctgccactctgatggtcatgttgtcctgggtgtctttctggatc
gaccgccgggccgtaccggccagggttcctctgggtatcaccacggtgctcaccatgtcc
accatcatcactggagtcaacgcctccatgcccagggtttcctacatcaaagctgtggac
atttacctctgggtcagttttgtgtttgtgttcctatcggtgatagagtacgctgcagtg
aactacctgtctacggtgcaagaacggaaggaaagaaagctacgagaaaggctgccctgc
acctgtggcatgacccacccaggcatgatgggtagctacagcgaggatgatgtcaacaac
actgggaactatggcggtgagtcgatggagaacggcgctgcaatgcagcaaaggatgatg
gtccatctggactttgaggagaacgaccagatcacaggacacgtgggctccagcgcttac
agcagcatgtggattgacacccacgccatagacaagtattcccgggtcatcttccctggg
tcctatattctgttcaacatcatctactggtcctgctacctctaa
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