Oncorhynchus nerka (sockeye salmon): 115107658
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Entry
115107658 CDS
T07952
Name
(RefSeq) CASP8-associated protein 2-like
KO
K25593
CASP8-associated protein 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115107658
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA processing factors
3' end processing
U7-dependent histone pre-mRNA processing factors
115107658
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding_7
Myb_DNA-binding
Motif
Other DBs
NCBI-GeneID:
115107658
NCBI-ProteinID:
XP_029487011
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All DBs
Position
LG24:6526233..6542267
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AA seq
970 aa
AA seq
DB search
MSEVNQENNNPGCSVTHAAQRDVDETSVHPSSLEELEEGEIVSESEEEETPAMPSSPPMT
VRPTRTNKNQPTLKSSPRLSKKAAKENSLVSKQNFKLGSKTLTSPFGSPTSNKTRYKTVQ
PPLPNAALSTVEEVMAMLAKIRYECRKKYMKLHSTFPKKTFCGVMDMSFFPSFTDFVDSV
SFTKLCSQEDYLKVKLKDIIISVLSKLSNNGIVNRIFDQEPPNMKLKLWEFVDVQLDFLF
KEIQTALRSVCKSSNGSQSAGAEKRDRLSGKGVPKLPVKSPKPSVAAELKMQQGVTITRT
SAPKRLQKKFTECVETSMKRTRSRTVPPCKTGLGRGKNIKMSDMESVPQTSDPPVIQPPL
QHVVEILPSNSSSSAERTATYVRRLSQNGSLHDKPDFEILTEQQASSLTFNLVTDSQMGE
IFKCLLQGSDLLETSVSAGDNHGWSLGTPLKERERFLGVGTPSKVGTPSKLIATWSAISP
IKFSSPNSKVQIPLNPSLLDESCMLEVPSGLPESRRTPQSSVFSHRSYSILSEDLSGSLT
IPSPLKSDNHLSFLHPASGEPMSAPDSVISAHFSEDALMDGEDATEQDIHLALDTDNSSG
ASSGGGRTREAPVNPLFHFKPHLPMQAVVMEKSNDHFIVRIRHANTNSTNSGVNSSSPGS
VNSTYQGNNSTSLGINSSSLVVNSLSPDINSTKQVVTYTNLGINSSQGVNSSSTGSVNST
YPGNNVTNPENNCAYPCVNFPSPEVSSTNPGISLTSADINPGGAESPQTPPGQEKHGKDE
DQPPEKTPSKSPFSEASPPFYLSSLSTSTETASALSSPCLTIIEDTPERDHSKGKTGKKR
TKHHVETKAKRAKKEMIPERSMHKKKSSKSPKGKGTGSSKRERSEVITPPQSTPSPNSLS
AKNIIVKKGEVMVTWTRDEDRDILLALKMKGSSPDTFSALSEKLNKTPAQIAKRFSQLMK
LFKKKEKMAN
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaagtgaatcaggagaacaacaatcctggctgctctgtcacacatgctgcacaa
cgagatgtggatgagacatctgtccatccttccagccttgaggaactggaagaaggtgaa
attgttagtgaaagtgaagaggaagaaactccagccatgccaagttctccacccatgacg
gttcggcccacaagaacgaataaaaatcaaccaactctcaagtcatcacctagactttca
aagaaggcggccaaagaaaatagtttagtttcaaaacagaattttaaactcggaagtaaa
accttgacttcaccatttggaagccccacatcaaacaaaacccgctataaaactgttcaa
cctcctttacccaatgctgccttgtctaccgtggaggaggttatggccatgcttgcaaag
attcgctatgagtgcagaaaaaagtacatgaagcttcattcaacattccctaagaaaacc
ttctgcggtgttatggacatgtccttttttccctcttttacagactttgttgatagtgta
agctttactaaactatgcagccaagaagattacctcaaagttaaactaaaggacatcatc
atttctgttttgagtaagttatcaaataatggcattgtcaaccgcatctttgaccaagaa
ccacctaatatgaagttgaaactctgggaattcgtggatgtgcagttagacttcttattc
aaggagattcaaactgcactgagaagtgtttgcaaatcctcaaacggaagccagtcggca
ggagcagaaaaaagagaccgtctctctggaaagggtgtacccaagctgcctgtgaagtcc
cccaagccatctgtggccgctgaacttaaaatgcagcagggagtgaccataaccagaact
tctgcaccaaaaagactgcaaaagaaattcacagagtgtgttgaaaccagcatgaaaaga
accaggtctcggactgtccccccttgcaaaacaggtcttggaagaggcaaaaatattaaa
atgtccgatatggaatcggtgcctcaaacctcagatcctcctgttatccaacctcctttg
caacacgtggtagagatcttaccatcaaacagctcttcatctgctgagagaactgcaacc
tatgttcgccggctgtctcaaaatggctcactccatgacaagcctgactttgaaatcctc
acagaacagcaagcctccagcctaacgttcaacctggtaacggactctcagatgggagag
atcttcaagtgtctcttacaagggtctgatctgctagaaacgagtgtttcagctggggac
aatcatggctggtcccttggtactcctctgaaagaaagggagcgtttcctaggcgttggt
accccaagtaaagttggtactccctctaaactcattgccacatggtcagctatttcacct
atcaagttttcctctccaaattcaaaagtccaaattccattaaatccatctttgttggat
gagagttgcatgttagaggtgccctccggcctaccagaaagcagaaggacaccacagtcc
agtgtgttctcgcatagatcatattccatcttgtcagaagatctgtctgggtctctcaca
attccctcacctctcaagtctgacaatcacctcagctttttgcacccagccagcggggag
cccatgtctgctccggacagcgtcatcagtgcacacttcagtgaggatgctcttatggat
ggggaagacgctacagagcaggacattcaccttgccctggacacggacaactccagcggt
gcatcaagcggtggtggcaggaccagggaggctcctgttaaccccttgtttcacttcaag
cctcacttgcccatgcaggcagtagtgatggagaagtcaaatgatcatttcattgtgagg
atacggcatgcaaacaccaactccaccaactcgggggtcaactcctcaagtcctggcagt
gtcaattctacctaccaaggaaataactccacaagcttaggaattaattcatcaagccta
gtagtgaattctttaagtccagacatcaattccaccaaacaagtggtcacctacaccaac
ctaggaatcaactcaagccaaggagtcaactcttcaagcacaggcagtgtcaactctacc
tacccaggaaataatgtcaccaacccagaaaataactgtgcctacccatgtgtcaacttc
ccaagccccgaagtaagttctaccaacccaggtatcagcctcacaagtgcagacatcaat
cctgggggcgctgagagccctcaaacaccaccaggacaagaaaaacatggtaaagacgaa
gatcagcccccagaaaaaactccttcaaaatcccctttttcagaggccagtcctcctttc
tacctttccagcctttccacaagcaccgaaacagcatctgcgctatcttcgccatgcctc
accatcatagaagacacaccagagagagaccacagcaagggtaagactgggaaaaagcgc
acaaagcaccatgtggaaactaaagcaaagcgggctaaaaaggagatgatcccagagagg
agcatgcataaaaagaagtcctcaaaaagtcccaaaggaaaggggactggaagctccaag
agggagagaagtgaagtcattactccaccccaatctaccccatcacccaacagcctgtct
gccaagaatatcatagtaaaaaagggtgaagtaatggtgacgtggacaagggatgaagac
cgagatattctcctcgcactgaagatgaaaggttcctctccagatactttctctgccctt
tcagagaaattgaacaagacacccgctcagattgcgaagcgattttcccaactgatgaag
ctttttaagaagaaggagaagatggcaaactga
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