Oncorhynchus nerka (sockeye salmon): 115107661
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Entry
115107661 CDS
T07952
Name
(RefSeq) leucine-rich repeat flightless-interacting protein 1-like isoform X1
KO
K26434
leucine-rich repeat flightless-interacting protein
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115107661
Transcription factors [BR:
one03000
]
Eukaryotic type
Other transcription factors
LRRFIP
115107661
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRRFIP
CCDC-167
Motif
Other DBs
NCBI-GeneID:
115107661
NCBI-ProteinID:
XP_029487018
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All DBs
Position
LG3:28877518..28948706
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AA seq
1172 aa
AA seq
DB search
MGTQGTGRKRNPIKDRSTAEDDTLNLIAREAEAMLALKRAARAEAREIRIKELERQQEEI
SDDDEQISVGSRGSVRVEDRDFLEKGSQSASTLTAATLASLSGSSSRRGSGELSMTGDTD
TSILEIKDSLVEVEEKYRKAMVSNAQLDNEKNNLMYQVDRLKDSLMELEELLAESRREYD
AKTKDFECEKHAYGVLQFQFNVMKETLKQSEELLTEICQLRLKQDSFVREISDLQETVEW
KDEKIEALEQQKEYSDAVKNERDELRDELVQLKDILKKHGIVLGPDLTTNRENVEMVTER
SASRDPAYQLAQDSKTSPTEGGNIMLGRAQDMELGSRGDKMVDPGRSRQQVETHEAVQEN
HLTSPTPCSLAGVSETKISMEARPCSPKLGDEVEIECSNVNKDSDNGILVVEVKHGPVCD
SEVIVPEEELTEEGEEYKPAGMEGTVQGRVEATNKWEMGIKDYKAYDMEAKVTKSSDHTK
EPTSEYGALAEQDNIALRKAVVKSIDSCPHPRETIEDTIQNGTQISPGTDHDTSKSAIKS
ECKPQPKLQKTKAEALSETTDTQPQAQGGKKKKKKKGKKGESQGDEKQEDYKKSTTEKGV
VSMKNSTQIPQRTNLDTTKSPVESKAEVLPEATDMQPQAQGGKKRKKGKKGDDNKRSKTE
KDVDSVSTDKEPVVEEVITIETQELLEEGTGSLPNRELQSPKEKAQTIAEGGNLKEEEQQ
LAEGRVEVKSEEPPIETPEVALTDQAKSEEVVKKDNQKPSMESEGEISVLCHECDIGILD
PVNQQYITNCVTSADNPKEKLESTTNTGTQKDESVYTTNPDNFVDCLNSSADPKCPLDLK
ESTAENSNNVKEDAIKVSVDETQTIQDTKAEGINFHSRIFLRTALEKSMVPEDLIANDGV
ITHPEHVTENAIKYLKVEGQDEQNGSPDECKNALEHKDISIALPASVDKCKNVSGENCGT
SLDSNCPAAETIRQPEQLMDLPGCPVADEHLDDNNEPVTLDEEKASNGGISTETELNDTE
TRLQDPVKETLETIDSFREQGYIESKPFTMVADAEEQDDPIETKLEGNKVPGPSEQGNDE
GDDDIDEGQSFDINDLDSVVSANVFPVTSQEVSQEVRMMEGNKMEVEPGREKVIKEEEDW
DKSTGKPQGTVEGVSTIVAKQPLERGSDSAPE
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atggggactcagggcacaggacgtaaaagaaatcccattaaggacaggtcgacggccgag
gatgatacccttaatctcattgcaagagaggcagaggccatgcttgctctgaagagggcg
gccagggcagaggccagagaaatccgtattaaggagctggagagacaacaggaggagatc
tcagatgatgatgagcagatatcggtgggcagccgaggcagtgtgagggtggaggacaga
gatttcctggaaaagggatctcaatctgcttccaccctaacggcagctaccctcgcttca
ctcagcgggtcttcctcccggagaggaagtggcgaattgtcgatgactggcgacacagac
acctccatactagagatcaaggattcccttgtggaggtggaggaaaagtaccgcaaggcc
atggtgtccaacgcccagctggacaatgagaagaacaacctgatgtaccaggtagatagg
ctgaaggactcgctcatggagctggaagagctgctggccgagtcacgccgcgagtatgat
gcaaagaccaaggactttgagtgtgagaaacatgcctacggcgtgctccagttccagttc
aacgtgatgaaagaaacgctaaaacagagcgaggagttactaacggagatctgtcagttg
cgtctcaagcaggacagctttgttagggaaatatctgacctgcaggaaacagtagagtgg
aaggatgaaaagattgaggccttagagcaacaaaaggagtattcggacgccgtcaaaaat
gagcgagatgagctcagggatgagctggtccagctgaaagatattctgaagaaacatgga
attgtcctcggacctgacctgaccaccaatagggaaaacgtggagatggtaactgaaagg
tcagctagtagagatccagcttatcaattggctcaggactccaagacgtcacccacggaa
ggggggaacatcatgctcggcagagctcaggatatggaattgggaagtagaggagataag
atggtggatccaggaaggtccaggcagcaagtggaaacgcatgaggcggttcaagagaac
catctgacctcgcccactccctgtagcctcgctggtgtttctgaaaccaaaatttctatg
gaggctcgtccatgctcgcccaaattgggggatgaggttgagattgaatgcagtaatgtc
aacaaagactctgacaatggcatactggtagtagaggtcaagcatggaccggtttgcgat
tctgaggtaattgttcctgaggaagagcttacagaagagggggaggaatacaaaccagca
ggcatggaggggacagtgcaagggagagtagaggccacaaacaaatgggaaatgggaata
aaagattacaaggcatatgatatggaggccaaagtcaccaagagtagtgatcacacaaaa
gagcctacctcagaatatggtgcattagctgaacaagataatatagcattgaggaaagcg
gttgtgaaaagtatagactcatgtcctcaccctagggaaaccattgaggacaccatacaa
aatggcacacagattagcccagggactgaccatgatactagtaagagcgcaataaaatca
gaatgtaagcctcaacctaagcttcagaaaacaaaggcagaagcgttatcagagacaact
gacactcagccacaggcccaaggaggcaagaagaagaagaagaagaaaggcaagaaggga
gagagtcaaggtgatgaaaagcaggaagactataagaagagcacaacagaaaagggtgta
gtctccatgaaaaatagcacacagattccccaaaggacaaaccttgatactactaagagc
ccagtcgaatcaaaggctgaagtgttgccagaggccactgatatgcagccacaggcccaa
ggaggcaaaaagaggaagaaaggcaagaagggagacgataacaagaggagcaaaacagaa
aaggatgtggactcagtctcaacagataaggagccagtagtggaggaagttatcacaata
gagacacaggagcttctagaggaagggaccggtagtttaccaaatcgagaactccaaagc
cctaaagaaaaagcacaaaccatagctgagggagggaacctgaaggaagaagaacaacaa
ctagcagagggccgagtagaggttaagagtgaggagcctcccattgaaaccccagaagta
gctctgacggaccaagccaagagtgaggaagttgtcaaaaaggacaaccaaaaaccttcc
atggaatcagaaggcgagatatcagtattatgccatgagtgcgacattggtatcctggat
cctgttaaccagcaatatataaccaattgtgtaaccagtgctgataaccctaaagagaaa
ttagaatccacaacaaatactggtacccaaaaagacgagtcagtgtacacaaccaaccct
gataactttgtagactgcctgaactcttcagctgacccgaaatgtccattggacttgaaa
gagtccactgctgagaattcaaacaatgtcaaagaagatgcaatcaaggtctcagttgat
gagactcaaacaatccaagacacaaaggctgagggaattaactttcacagtcgcatattt
ctaagaacggcgctcgagaagagcatggtacctgaagaccttatcgccaatgatggtgtc
attactcacccagagcatgttaccgaaaatgccataaaatacctgaaagtggaaggtcag
gatgaacaaaatgggagcccagatgagtgtaaaaatgcacttgaacataaagacatttcc
atagcattaccagcaagtgtagataaatgcaaaaatgtatcaggagagaactgtggcaca
tcgctcgacagcaactgccctgctgctgagaccataagacagcctgaacaattgatggat
ctacctggttgtccagtcgctgacgagcacttagatgacaacaacgagccagttacactt
gatgaagaaaaggcatcaaatggagggatctccacagagaccgagctgaatgatacagaa
acacgactacaggaccctgtaaaagaaactctggagacaattgactcttttagggaacag
ggatacatagaaagcaaaccattcactatggtggccgacgcagaagagcaagacgatccc
attgagaccaagctggagggtaacaaggtacctggacccagtgagcaggggaatgatgag
ggggacgatgatattgatgagggtcaatcgtttgacattaacgacctagattcggtggtt
tctgcaaatgtgtttccagtaacatcccaagaggtcagccaggaggtaagaatgatggaa
ggcaacaaaatggaggtagagccaggtagagagaaggtaatcaaggaagaggaagactgg
gacaagtcaacaggaaaaccgcagggcacagtagagggagttagcacaatagtggcaaag
cagccacttgaacgggggtcagatagtgcaccagaatag
DBGET
integrated database retrieval system
