KEGG   Oncorhynchus nerka (sockeye salmon): 115107671
Entry
115107671         CDS       T07952                                 
Name
(RefSeq) laminin subunit alpha-4-like
  KO
K06241  laminin, alpha 4
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04510  Focal adhesion
one04512  ECM-receptor interaction
one04518  Integrin signaling
Brite
KEGG Orthology (KO) [BR:one00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    115107671
   04518 Integrin signaling
    115107671
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    115107671
SSDB
Motif
Pfam: Laminin_G_2 Laminin_G_1 EGF_laminin Laminin_I EGF_LMN_ATRN Laminin_G_3 MT HEAT_GCN1_fung
Other DBs
NCBI-GeneID: 115107671
NCBI-ProteinID: XP_029487032
LinkDB
Position
LG24:7880726..7920614
AA seq 1881 aa
MSATKALPCLCLLLSIVLSGIVCPATSIGLHWEQQSVMKVCAKLYFLSNQKKCLPCNCKG
HSETCEDITGVCTSCQDHTTGDFCEICEDGYMPDIANHGRHSCQPCACPLSSPSNNFAEH
CDRSSNILRCNCQEGYAGHYCERCAPGFYGNPMVIGDSCKSCDCNGNSDPNHIFNECHNV
TGFCQNCWGDTAGANCERCAPGFYGDAISAKNCRVCECSKCGTASCDDRTGTCHCKPGVT
GQLCDQCEKGHTGFNNCQGCHSCDCGPAGLRPTCHPLTHSCQCKPGAGGRYCERCLPDYW
NYGPSGCQKCDCASSHCDVHTGECLPESTTVNLCNISCDECIWHLIGDLRLSNKTLDQVK
VSVLNISTGAAANDRLKYYNYTAQRLQTQFVNWRNKSALMRTQTGQLEEASAVLLLDMNH
LAETESVLKSLGDRVDDDTLQSFTLADELTTNLTAIKVLIEEMISDWKLYSVHQDLDPEI
IIQKTAVAEGMVAWIKKLDLSPQEPIATDESTEAHDLLRRMRQLEKKLISTDSRVAPVRE
VLSRFTNKLSEAQEILQKAANTVQETEDMNKANTVKFQKSEAKQQELIENHEAVNDTLQL
AKDLIMDTENTVAEMHLLVQNVTEYHAAIDGASKGLQEKTEVLPLTDRDLVLRAQDHAED
LQSQADELEYALKRSDANGFVQKALVTANVYNNIVQYIEEANITGLATMDLATRAEDASD
GINTQLGFLKTQSENVFKESVSLRSEQFEVEAEVLDKMKYIEETKETMGDYTKKLAVVLK
DIKGIEPGRTTKRLELTEEVAEGTLNRSVEVLQTITPIHEKVEEWATSMKNQDYSAAAFD
RAVVSAGEAVENLSELVPELLHKLRVVEEKNQVNNVTTNIMRIRELIAQARSVAKKVQVS
MKFNGQSSVQVQPHTNLEDLKTVTTISLFIRVDPDKDPIEDRFIFYLGDRNGRKDYMGLA
IKNDNLVYVYNLGEEDVEIPLGSKPISQWPPVFNLIKVERMGRHGKVFLTVPSQASTDEQ
KFIQKGEAFGTDSLFDLDPEDTVFFVGGVPADVRLPPALSLAPFVGCIELASLNNDVISM
YNFKQTHKMDVVASTPCPRYKLAFSQSRIASYLFDGTGYALINNMERRGKFGIVTRFDIA
VRTVANNGILLLMVNGDNFFLLELKNGFLRLMYDFGFSGGPIVMESNSPKLQIKDARYHE
VSVIYHYSKKFILLVDKSHVKSMENEKKTLPFSDIYIGGAPSHILLSRPDLSSLVGLKGC
VKGFQFQKKDFNLLEEPGTIGISSGCPEDYFMSRKAYFTGESYLGSAAKISPFDSFEGGL
NFRTLQPTGLLFYHSEGSDEFTITLENGAVVLNSRGTRVKSHKKQYNDGITHFLVASVNN
DKYELVVDDKDKHEKKRPTAAPSASTVRNFYFGGSPSSSIKNFTGCISYAYISRQDRDIE
PEDFQKYTENVQTSLQDCPVKRPPAALFSKQSKNSAKPKQGHTRKVGRDKSNLPKGLLGL
NSDDQEPGETEETPCYLSPRPRATRHAHHYGGTANSRQEFTDIPGSLSKRSHFSLSLKTQ
SSFGLIFYASDEAEDNFMALFLAHGKLVYTFNLGQQRVKIKSLEKNNDGAWHNVIFIRDG
NLGQLVIDGLTVLEDRAQGSNVSWHVSSQLYLGGVPPGRAQRNIQRNSAYSFTGCVKNLQ
LNGQWLSSVSQTFGVTPCFEGLSEPGTYFSEEGGYVVLDDTFNLGLKFELVVEVRPRVAS
GVLLHVYTAAEEYLTMYIHQGAVMVLVNNGVREFFTQVTPRLGLCDGSWHRITVIRDANV
VQLDVDSEVNHVVGPLNPSTKRARTPVFIGGAPESLLPEGIATRRAYTGCMRKLTVNESQ
VSFSKAALVSGAVSVGSCPAA
NT seq 5646 nt   +upstreamnt  +downstreamnt
atgtctgctactaaagctctgccctgcctctgccttctactctccatcgtcctctcaggg
atcgtctgcccagcgacttccattggtttacattgggaacagcagtctgtgatgaaagtg
tgtgcaaaactatattttctcagtaaccagaaaaaatgcctaccatgtaactgcaaaggc
cattcagaaacatgtgaagatattacaggtgtttgtacatcatgtcaggaccacaccact
ggggatttctgtgaaatatgtgaggatggatacatgcctgacatcgccaaccacggacgt
cactcctgccagccgtgcgcctgtcccctgtccagcccctccaacaactttgcagagcac
tgtgacagaagcagtaacatcctacgatgcaactgccaagagggctatgctggacattac
tgtgagagatgtgctccaggtttctatggcaaccccatggtgatcggtgactcctgtaag
agttgtgactgtaacggtaactcggaccccaaccacatcttcaatgagtgccacaacgtg
accggcttctgtcagaattgctggggggacacggccggagccaactgtgaacggtgtgcc
ccaggtttctacggcgacgccatcagtgccaagaactgcagagtgtgtgagtgtagtaag
tgtgggacagcttcgtgtgatgacaggacagggacatgtcactgtaagcctggtgtcacc
ggccaactctgtgaccaatgtgagaagggccacacaggtttcaataactgccagggctgc
catagttgtgactgcggacctgccggtctccggcccacctgtcatcctctgacccacagc
tgccagtgcaaaccaggggccggaggccgatactgcgagcgttgcctcccagactactgg
aactacggcccctcagggtgtcagaaatgtgactgtgctagcagccactgtgatgtgcac
actggggagtgcctccctgaatccaccacggtcaacctctgcaacatcagttgtgatgag
tgtatctggcacctgattggtgacctgaggctgtccaataagaccctggaccaggtgaag
gtcagtgtgttgaacatctccactggggctgcagccaacgacaggctcaagtactacaac
tacaccgcccaacgtctgcagacacagtttgtgaactggaggaataagtcagctctgatg
aggacccagactgggcagctggaggaggccagcgctgttctactcttagacatgaaccat
cttgcagagacggagagtgtactgaagtccttgggggacagagtggatgacgacacacta
cagagcttcactctggctgatgagctgacaactaaccttaccgccatcaaagtgctaatt
gaagagatgatcagtgactggaagctgtacagtgttcatcaggatctggacccagagatc
atcattcaaaagacagctgttgccgagggcatggtggcctggataaagaaactggacctt
tccccacaagaacccatcgccaccgatgagtcaaccgaggcccacgacctccttagacgc
atgcgtcagctggagaagaagctgatcagtacagacagccgcgtggccccggtacgggag
gtgctctcccgcttcaccaacaagctctctgaggcccaggagatcctccagaaggctgcc
aacactgtccaggagacggaagacatgaacaaagccaacactgtcaaattccagaagagt
gaggccaagcagcaggaactgatagagaaccacgaagctgtgaatgacaccttgcagttg
gctaaagaccttatcatggacactgaaaatactgtggccgagatgcatctcctggtgcag
aacgtgactgaataccacgctgcgatcgacggcgccagcaaggggctgcaggagaagact
gaggtgctgcccctgacagacagagacctggtcctgagagcccaggaccacgcagaggac
ctccagagtcaagcggacgagctggagtatgctctgaaacgcagtgatgccaacggcttc
gtgcagaaggctctggttacagccaatgtgtacaacaacatagtccagtacatcgaagag
gccaacatcactggactggcaacaatggatttagcaacaagagctgaggatgccagcgat
gggatcaacacccagctggggtttctgaagacccagagtgagaatgtcttcaaggaatct
gtttcattgcgctctgagcaatttgaggttgaagctgaggttctggacaagatgaaatac
attgaggagaccaaggagaccatgggggattacaccaaaaaactagcggtagtactgaaa
gatatcaagggaattgagccaggcagaaccaccaagcgtctggagctcaccgaggaggtg
gctgaaggcaccctgaaccggtcagtggaggtcctgcagaccatcacccccatccacgag
aaggtggaggagtgggccaccagcatgaagaaccaagattactctgctgcagcctttgac
cgtgctgtagtctctgctggggaagcagtggagaacctgtctgagctggtccctgaactg
ctgcataagctgcgtgtggtggaggagaagaaccaagtgaacaatgtgaccactaacatc
atgaggatcagagagctcattgcccaggccaggagtgtggccaagaaggtccaagtgtcc
atgaagttcaatggtcagtcatcggttcaggtgcagccccacaccaacctggaggacctg
aagacagtgaccaccatcagcctgttcatcagggtggacccagataaggaccctatcgag
gaccgcttcatcttctatctgggagacagaaacggtaggaaggactacatgggtctggca
atcaagaatgacaacctggtgtacgtctacaacctgggagaggaagatgtcgagatccca
cttggttcaaagcctatcagccaatggcctccagtcttcaacctcatcaaagtggagagg
atgggcagacatggcaaagtgtttctgaccgtacccagtcaggcttccacagacgagcag
aaattcatccagaagggagaggcctttggcaccgactccctgttcgacctggatcctgaa
gacactgtcttctttgtgggtggcgtccccgctgatgtcaggcttccacctgcactaagc
ctagctccttttgtgggctgcatcgaattggcctctttgaataacgatgtcatcagtatg
tacaatttcaaacagacccacaagatggatgtagttgcttcaacaccttgtcccaggtat
aagctggcattctcacagagtcgtatcgccagctacctgtttgacggaactgggtatgcc
ctcatcaacaacatggagaggaggggtaaatttggcatcgtcacccggtttgacattgct
gttcggacagtggcaaacaacggtatcctgttactcatggtcaatggggacaacttcttc
ctgttggagttgaagaatggcttcctacgtctcatgtatgactttggcttcagtggaggc
ccgatcgtcatggagagtaactcacccaaactacaaatcaaggacgcaagataccatgag
gtgtcagtgatctaccattactccaagaagttcattctattggtggacaagagtcacgtg
aagtccatggagaacgagaaaaagactctgcccttctctgatatctacataggaggagcc
ccctcgcacattctcctctccaggcctgatctgtcctccctggttgggctgaagggctgt
gtgaagggtttccagttccagaagaaagacttcaacctcctggaagaacctggcactatt
ggcatcagcagcggttgtcctgaggactactttatgtcccgtaaagcctatttcactgga
gagagctacctagggtctgcggcaaagatatctcctttcgactccttcgagggaggcctt
aacttcaggacactgcagcctactggtctcctgttctaccacagcgaagggtctgatgag
tttaccatcacccttgagaacggagcagtggtattgaactccagaggcaccagagtcaaa
tcacacaagaagcagtacaatgatggaattacccatttcctggtagcttcagtgaataat
gacaagtatgagttggtggtggatgacaaagacaagcatgagaagaaacgtccgactgct
gccccgtcagcatccacagtgaggaacttctacttcggaggctctcccagcagcagcatc
aagaacttcactggctgtatcagctatgcctacatcagcagacaagacagagacattgag
ccagaggattttcagaagtacactgagaatgtccagacctctctgcaggactgccctgtg
aagcgaccacccgctgccctgttctcgaagcaaagtaaaaactctgccaaacccaagcag
ggccatacaaggaaggtgggcagagataagtccaacctcccaaaaggcctgttgggactg
aatagtgatgaccaggagccaggagagacagaggagacgccctgctacctgtcccccagg
ccccgtgccacccgccatgcccatcactatgggggcactgccaacagcaggcaggagttc
acagacatcccagggtccctctctaagaggtctcacttctccctgtccctgaagacccag
tcctcctttggcctaatattttatgcatcagatgaggcggaggacaacttcatggctctc
ttcctggcccatggcaagctggtgtacacattcaacctgggtcagcagagggtcaagatc
aagagcctggagaagaacaatgatggagcatggcacaatgttatttttatccgtgatggg
aatctaggccaattagtcattgatgggctgacggtgctggaggacagagctcagggctcc
aacgtttcctggcacgtcagcagccaactctacttggggggggtgcccccagggagggcc
cagaggaacatacagagaaactctgcatacagcttcactggctgtgtgaagaacctccag
ctgaatggccaatggctgtcttccgtgtcccagacctttggggtgacgccgtgtttcgag
ggactctccgagccggggacatacttctccgaagagggtggatatgttgttttggatgac
acgttcaacctggggctgaagtttgagctggtggtagaggtgcgcccccgtgtggcatca
ggggtgctactgcatgtgtacacagcagccgaggagtacctcaccatgtacatccatcaa
ggagcagtgatggtgctggtgaacaacggagttcgtgagttcttcactcaggtcactcct
agactaggcctgtgtgatgggagctggcacaggatcacagtgattcgagatgccaatgtt
gtccagctggatgtggactcagaggtcaatcacgtggtgggaccactcaaccccagcacc
aagagagccaggacccctgtgttcattggtggagctccagaatctcttcttccagagggc
attgcgactaggagggcctacacaggctgtatgaggaagctgactgtgaatgagagccaa
gtgagcttcagtaaagctgccctggtcagcggggccgtcagtgtgggctcctgtccagct
gcctaa

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