Oncorhynchus nerka (sockeye salmon): 115107671
Help
Entry
115107671 CDS
T07952
Name
(RefSeq) laminin subunit alpha-4-like
KO
K06241
laminin, alpha 4
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04510
Focal adhesion
one04512
ECM-receptor interaction
one04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
115107671
04518 Integrin signaling
115107671
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
115107671
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
EGF_laminin
Laminin_I
EGF_LMN_ATRN
Laminin_G_3
MT
HEAT_GCN1_fung
Motif
Other DBs
NCBI-GeneID:
115107671
NCBI-ProteinID:
XP_029487032
LinkDB
All DBs
Position
LG24:7880726..7920614
Genome browser
AA seq
1881 aa
AA seq
DB search
MSATKALPCLCLLLSIVLSGIVCPATSIGLHWEQQSVMKVCAKLYFLSNQKKCLPCNCKG
HSETCEDITGVCTSCQDHTTGDFCEICEDGYMPDIANHGRHSCQPCACPLSSPSNNFAEH
CDRSSNILRCNCQEGYAGHYCERCAPGFYGNPMVIGDSCKSCDCNGNSDPNHIFNECHNV
TGFCQNCWGDTAGANCERCAPGFYGDAISAKNCRVCECSKCGTASCDDRTGTCHCKPGVT
GQLCDQCEKGHTGFNNCQGCHSCDCGPAGLRPTCHPLTHSCQCKPGAGGRYCERCLPDYW
NYGPSGCQKCDCASSHCDVHTGECLPESTTVNLCNISCDECIWHLIGDLRLSNKTLDQVK
VSVLNISTGAAANDRLKYYNYTAQRLQTQFVNWRNKSALMRTQTGQLEEASAVLLLDMNH
LAETESVLKSLGDRVDDDTLQSFTLADELTTNLTAIKVLIEEMISDWKLYSVHQDLDPEI
IIQKTAVAEGMVAWIKKLDLSPQEPIATDESTEAHDLLRRMRQLEKKLISTDSRVAPVRE
VLSRFTNKLSEAQEILQKAANTVQETEDMNKANTVKFQKSEAKQQELIENHEAVNDTLQL
AKDLIMDTENTVAEMHLLVQNVTEYHAAIDGASKGLQEKTEVLPLTDRDLVLRAQDHAED
LQSQADELEYALKRSDANGFVQKALVTANVYNNIVQYIEEANITGLATMDLATRAEDASD
GINTQLGFLKTQSENVFKESVSLRSEQFEVEAEVLDKMKYIEETKETMGDYTKKLAVVLK
DIKGIEPGRTTKRLELTEEVAEGTLNRSVEVLQTITPIHEKVEEWATSMKNQDYSAAAFD
RAVVSAGEAVENLSELVPELLHKLRVVEEKNQVNNVTTNIMRIRELIAQARSVAKKVQVS
MKFNGQSSVQVQPHTNLEDLKTVTTISLFIRVDPDKDPIEDRFIFYLGDRNGRKDYMGLA
IKNDNLVYVYNLGEEDVEIPLGSKPISQWPPVFNLIKVERMGRHGKVFLTVPSQASTDEQ
KFIQKGEAFGTDSLFDLDPEDTVFFVGGVPADVRLPPALSLAPFVGCIELASLNNDVISM
YNFKQTHKMDVVASTPCPRYKLAFSQSRIASYLFDGTGYALINNMERRGKFGIVTRFDIA
VRTVANNGILLLMVNGDNFFLLELKNGFLRLMYDFGFSGGPIVMESNSPKLQIKDARYHE
VSVIYHYSKKFILLVDKSHVKSMENEKKTLPFSDIYIGGAPSHILLSRPDLSSLVGLKGC
VKGFQFQKKDFNLLEEPGTIGISSGCPEDYFMSRKAYFTGESYLGSAAKISPFDSFEGGL
NFRTLQPTGLLFYHSEGSDEFTITLENGAVVLNSRGTRVKSHKKQYNDGITHFLVASVNN
DKYELVVDDKDKHEKKRPTAAPSASTVRNFYFGGSPSSSIKNFTGCISYAYISRQDRDIE
PEDFQKYTENVQTSLQDCPVKRPPAALFSKQSKNSAKPKQGHTRKVGRDKSNLPKGLLGL
NSDDQEPGETEETPCYLSPRPRATRHAHHYGGTANSRQEFTDIPGSLSKRSHFSLSLKTQ
SSFGLIFYASDEAEDNFMALFLAHGKLVYTFNLGQQRVKIKSLEKNNDGAWHNVIFIRDG
NLGQLVIDGLTVLEDRAQGSNVSWHVSSQLYLGGVPPGRAQRNIQRNSAYSFTGCVKNLQ
LNGQWLSSVSQTFGVTPCFEGLSEPGTYFSEEGGYVVLDDTFNLGLKFELVVEVRPRVAS
GVLLHVYTAAEEYLTMYIHQGAVMVLVNNGVREFFTQVTPRLGLCDGSWHRITVIRDANV
VQLDVDSEVNHVVGPLNPSTKRARTPVFIGGAPESLLPEGIATRRAYTGCMRKLTVNESQ
VSFSKAALVSGAVSVGSCPAA
NT seq
5646 nt
NT seq
+upstream
nt +downstream
nt
atgtctgctactaaagctctgccctgcctctgccttctactctccatcgtcctctcaggg
atcgtctgcccagcgacttccattggtttacattgggaacagcagtctgtgatgaaagtg
tgtgcaaaactatattttctcagtaaccagaaaaaatgcctaccatgtaactgcaaaggc
cattcagaaacatgtgaagatattacaggtgtttgtacatcatgtcaggaccacaccact
ggggatttctgtgaaatatgtgaggatggatacatgcctgacatcgccaaccacggacgt
cactcctgccagccgtgcgcctgtcccctgtccagcccctccaacaactttgcagagcac
tgtgacagaagcagtaacatcctacgatgcaactgccaagagggctatgctggacattac
tgtgagagatgtgctccaggtttctatggcaaccccatggtgatcggtgactcctgtaag
agttgtgactgtaacggtaactcggaccccaaccacatcttcaatgagtgccacaacgtg
accggcttctgtcagaattgctggggggacacggccggagccaactgtgaacggtgtgcc
ccaggtttctacggcgacgccatcagtgccaagaactgcagagtgtgtgagtgtagtaag
tgtgggacagcttcgtgtgatgacaggacagggacatgtcactgtaagcctggtgtcacc
ggccaactctgtgaccaatgtgagaagggccacacaggtttcaataactgccagggctgc
catagttgtgactgcggacctgccggtctccggcccacctgtcatcctctgacccacagc
tgccagtgcaaaccaggggccggaggccgatactgcgagcgttgcctcccagactactgg
aactacggcccctcagggtgtcagaaatgtgactgtgctagcagccactgtgatgtgcac
actggggagtgcctccctgaatccaccacggtcaacctctgcaacatcagttgtgatgag
tgtatctggcacctgattggtgacctgaggctgtccaataagaccctggaccaggtgaag
gtcagtgtgttgaacatctccactggggctgcagccaacgacaggctcaagtactacaac
tacaccgcccaacgtctgcagacacagtttgtgaactggaggaataagtcagctctgatg
aggacccagactgggcagctggaggaggccagcgctgttctactcttagacatgaaccat
cttgcagagacggagagtgtactgaagtccttgggggacagagtggatgacgacacacta
cagagcttcactctggctgatgagctgacaactaaccttaccgccatcaaagtgctaatt
gaagagatgatcagtgactggaagctgtacagtgttcatcaggatctggacccagagatc
atcattcaaaagacagctgttgccgagggcatggtggcctggataaagaaactggacctt
tccccacaagaacccatcgccaccgatgagtcaaccgaggcccacgacctccttagacgc
atgcgtcagctggagaagaagctgatcagtacagacagccgcgtggccccggtacgggag
gtgctctcccgcttcaccaacaagctctctgaggcccaggagatcctccagaaggctgcc
aacactgtccaggagacggaagacatgaacaaagccaacactgtcaaattccagaagagt
gaggccaagcagcaggaactgatagagaaccacgaagctgtgaatgacaccttgcagttg
gctaaagaccttatcatggacactgaaaatactgtggccgagatgcatctcctggtgcag
aacgtgactgaataccacgctgcgatcgacggcgccagcaaggggctgcaggagaagact
gaggtgctgcccctgacagacagagacctggtcctgagagcccaggaccacgcagaggac
ctccagagtcaagcggacgagctggagtatgctctgaaacgcagtgatgccaacggcttc
gtgcagaaggctctggttacagccaatgtgtacaacaacatagtccagtacatcgaagag
gccaacatcactggactggcaacaatggatttagcaacaagagctgaggatgccagcgat
gggatcaacacccagctggggtttctgaagacccagagtgagaatgtcttcaaggaatct
gtttcattgcgctctgagcaatttgaggttgaagctgaggttctggacaagatgaaatac
attgaggagaccaaggagaccatgggggattacaccaaaaaactagcggtagtactgaaa
gatatcaagggaattgagccaggcagaaccaccaagcgtctggagctcaccgaggaggtg
gctgaaggcaccctgaaccggtcagtggaggtcctgcagaccatcacccccatccacgag
aaggtggaggagtgggccaccagcatgaagaaccaagattactctgctgcagcctttgac
cgtgctgtagtctctgctggggaagcagtggagaacctgtctgagctggtccctgaactg
ctgcataagctgcgtgtggtggaggagaagaaccaagtgaacaatgtgaccactaacatc
atgaggatcagagagctcattgcccaggccaggagtgtggccaagaaggtccaagtgtcc
atgaagttcaatggtcagtcatcggttcaggtgcagccccacaccaacctggaggacctg
aagacagtgaccaccatcagcctgttcatcagggtggacccagataaggaccctatcgag
gaccgcttcatcttctatctgggagacagaaacggtaggaaggactacatgggtctggca
atcaagaatgacaacctggtgtacgtctacaacctgggagaggaagatgtcgagatccca
cttggttcaaagcctatcagccaatggcctccagtcttcaacctcatcaaagtggagagg
atgggcagacatggcaaagtgtttctgaccgtacccagtcaggcttccacagacgagcag
aaattcatccagaagggagaggcctttggcaccgactccctgttcgacctggatcctgaa
gacactgtcttctttgtgggtggcgtccccgctgatgtcaggcttccacctgcactaagc
ctagctccttttgtgggctgcatcgaattggcctctttgaataacgatgtcatcagtatg
tacaatttcaaacagacccacaagatggatgtagttgcttcaacaccttgtcccaggtat
aagctggcattctcacagagtcgtatcgccagctacctgtttgacggaactgggtatgcc
ctcatcaacaacatggagaggaggggtaaatttggcatcgtcacccggtttgacattgct
gttcggacagtggcaaacaacggtatcctgttactcatggtcaatggggacaacttcttc
ctgttggagttgaagaatggcttcctacgtctcatgtatgactttggcttcagtggaggc
ccgatcgtcatggagagtaactcacccaaactacaaatcaaggacgcaagataccatgag
gtgtcagtgatctaccattactccaagaagttcattctattggtggacaagagtcacgtg
aagtccatggagaacgagaaaaagactctgcccttctctgatatctacataggaggagcc
ccctcgcacattctcctctccaggcctgatctgtcctccctggttgggctgaagggctgt
gtgaagggtttccagttccagaagaaagacttcaacctcctggaagaacctggcactatt
ggcatcagcagcggttgtcctgaggactactttatgtcccgtaaagcctatttcactgga
gagagctacctagggtctgcggcaaagatatctcctttcgactccttcgagggaggcctt
aacttcaggacactgcagcctactggtctcctgttctaccacagcgaagggtctgatgag
tttaccatcacccttgagaacggagcagtggtattgaactccagaggcaccagagtcaaa
tcacacaagaagcagtacaatgatggaattacccatttcctggtagcttcagtgaataat
gacaagtatgagttggtggtggatgacaaagacaagcatgagaagaaacgtccgactgct
gccccgtcagcatccacagtgaggaacttctacttcggaggctctcccagcagcagcatc
aagaacttcactggctgtatcagctatgcctacatcagcagacaagacagagacattgag
ccagaggattttcagaagtacactgagaatgtccagacctctctgcaggactgccctgtg
aagcgaccacccgctgccctgttctcgaagcaaagtaaaaactctgccaaacccaagcag
ggccatacaaggaaggtgggcagagataagtccaacctcccaaaaggcctgttgggactg
aatagtgatgaccaggagccaggagagacagaggagacgccctgctacctgtcccccagg
ccccgtgccacccgccatgcccatcactatgggggcactgccaacagcaggcaggagttc
acagacatcccagggtccctctctaagaggtctcacttctccctgtccctgaagacccag
tcctcctttggcctaatattttatgcatcagatgaggcggaggacaacttcatggctctc
ttcctggcccatggcaagctggtgtacacattcaacctgggtcagcagagggtcaagatc
aagagcctggagaagaacaatgatggagcatggcacaatgttatttttatccgtgatggg
aatctaggccaattagtcattgatgggctgacggtgctggaggacagagctcagggctcc
aacgtttcctggcacgtcagcagccaactctacttggggggggtgcccccagggagggcc
cagaggaacatacagagaaactctgcatacagcttcactggctgtgtgaagaacctccag
ctgaatggccaatggctgtcttccgtgtcccagacctttggggtgacgccgtgtttcgag
ggactctccgagccggggacatacttctccgaagagggtggatatgttgttttggatgac
acgttcaacctggggctgaagtttgagctggtggtagaggtgcgcccccgtgtggcatca
ggggtgctactgcatgtgtacacagcagccgaggagtacctcaccatgtacatccatcaa
ggagcagtgatggtgctggtgaacaacggagttcgtgagttcttcactcaggtcactcct
agactaggcctgtgtgatgggagctggcacaggatcacagtgattcgagatgccaatgtt
gtccagctggatgtggactcagaggtcaatcacgtggtgggaccactcaaccccagcacc
aagagagccaggacccctgtgttcattggtggagctccagaatctcttcttccagagggc
attgcgactaggagggcctacacaggctgtatgaggaagctgactgtgaatgagagccaa
gtgagcttcagtaaagctgccctggtcagcggggccgtcagtgtgggctcctgtccagct
gcctaa
DBGET
integrated database retrieval system