Oncorhynchus nerka (sockeye salmon): 115107701
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Entry
115107701 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase HECW2-like
KO
K12168
E3 ubiquitin-protein ligase HECW2 [EC:
2.3.2.26
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
one04121
]
115107701
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
115107701
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
HECT type E3
115107701
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
HECW_N
HECW1_helix
WW
C2
RFXA_RFXANK_bdg
Motif
Other DBs
NCBI-GeneID:
115107701
NCBI-ProteinID:
XP_029487101
LinkDB
All DBs
Position
LG3:29031154..29094425
Genome browser
AA seq
1529 aa
AA seq
DB search
MRPSLAVLPRTRNHPHTAPPHNAHGLSAHVGREHLSAPRRRSPHLRHTLSPENLRSLAER
GGAARDTASVVSSPMGLPRANSDTDLVTSQGRSSLTASTLEFTLGRGQNLVISWDIKEEV
DATDWIGLYHIDEISPSNVWDCKNRGVNGTQRGQIVWRLEPGPYFMDAETKICFKYYHGV
SGALRATTPCITVKNPGVLGEGQSEGQSSTDHPRKLISFTLTDMHAVGLKKGMFFNPDPY
LKMSIHPGKRSGFPTFSHHGQERRSAIIANTTNPKWRGEKYTFVALMTDILNIEVKDKFA
KSRPIIKRFLGQLTIPVQRLIEKIPGLQPLSFSLCRRLPTEHVSGQMQFRVELTSTGPDG
ASPDSIIGVPNNGAPGTPSDDEDLPHLLPGVVTGGPSPTGSLGSQRSWEGGATAYPVPDY
RDFSGTEGRTTEGESYSGPLRLQRSLSEGLDAIEAPKGPGERPLGAASPKLRSSFPTHTR
LSAMLHIDSDEDEERSGPTDIYPVPGSPLLLNGGPEGPEEEDVVPELQQDPDSEQLEPRV
VGDEQLMVTGEDCAPGGESNVAPELDLALDFEDSSEPDVFSEVEEVPFFSEALSQSLLAV
GLEGPEEGQGPADNPSSPIDTCSMAMAPQTVFSSSESCPITMSTAEEAEERAVAAIDPGG
DSFTGTPPTHQHVDDEGGGHTSANEVEGDAPSAYALEPGEEISERMWSLQVSGDVPQDEE
GEEPRPAGVAVSVDSDAVAMEADGEDGAQVNGHPVHCLPSVRHDIHRYQRVDEPLPPNWE
ARIDSHGRIFFVDHVNRTTTWQRPTGPPAPQGLTRSSSIQQMEQLNRRYQSIRRTMTSER
SEENTVDLPPEPTESDFLPQTIPEYRRESAVGHSSSRSRLSLLLQSPSAKFLCSTDFFTV
LHSNPSAYSMFTSNTCLKHMISKVRRDAHHYERYQHNRDLVAFLNMFTNSQLELPRGWEM
KHDQTGKPFFVDHNCRSTTFIDPRLPLQSAHSTSLLAHRQHLNRQRSHSAGEVVDDMRHS
SPPVVPCPSSTFSGSTRNQDLVPVAYNDKIVAFLRQPNIIEILQERQPELVRNHSLKERL
QFIRSEGVSGLARLSSDADLVILLSLFEEEVMSYVPPHALLHPSYCSSPQSSPGTQRANA
RAPAPYKRDFEAKLRNFYRKLETKGYGQGPGKVKLIIRRDHLLEDAFNQIMCYSRKDLQR
SKLYVSFVGEEGLDYSGPSREFFFLVSRELFNPYYGLFEYSANDTYTVQISPMSAFVDNH
HEWFRFSGRILGLALIHQYLLDAFFTRPFYKGLLRIPCDLSDLEFLDEEFHQSLQWMKDN
DIEDMLDLTFTVNEEVFGQITERELKPGGAGIPVSEKNKKEYIERMVKWRIERGVAQQTE
SLVRGFYEVVDVRLVSVFDARELELVIAGTAEIDLADWRNNTEYRGGYHDNHIVIRWFWA
AVERFNNEQKLRLLQFVTGTSSIPYEGFASLRGSNGPRRFCVEKWGKITSLPRAHTCFNR
LDLPPYPSFSMLYEKMLTAVEETSTFGLE
NT seq
4590 nt
NT seq
+upstream
nt +downstream
nt
atgcgtccctcactcgcggtccttcccaggacccgtaaccatccccacacagcccccccc
cacaatgcacacggactgtctgcacatgtggggcgggagcacctgtcggccccacggagg
cgcagcccacacctgcgacacacgctcagcccagagaacctgcggagcctggcggagcga
ggcggtgccgccagggacacggcttctgtggtgagcagccccatgggtctcccgagggcc
aacagcgacacagacctggtgacctcgcagggccgctcgtcgctgactgcgtccacactg
gagttcacgctggggaggggccagaacctggtcatctcctgggacatcaaggaggaggtg
gacgccaccgactggatcggcctgtatcacattgatgaaatcagcccttccaatgtgtgg
gactgtaagaaccgtggggtgaatgggacacagaggggccagatcgtctggaggttggag
cctgggccttacttcatggacgctgagaccaagatctgcttcaagtactatcacggcgtc
agtggagccctgagagcaaccaccccctgcatcactgtgaagaaccctggagtcctggga
gaaggtcaaagtgaggggcagtcatccacagatcatcctcgcaaactaatcagctttact
ttgacagatatgcatgcggtggggctgaagaagggtatgttcttcaacccggatccctac
ctgaagatgtccatccaccctgggaagagaagtggcttccccaccttcagccaccacgga
caggagagacgctccgccatcatcgccaataccaccaaccctaagtggcgcggagagaaa
tacacttttgtagcactgatgacagacattctgaacatcgaggtgaaggacaagtttgcc
aaaagtcgaccaatcatcaaacgcttccttggtcagctgaccattcctgtgcagaggctg
attgagaaaatacctggtctccagcctctgagcttctctctgtgtcgacggttgcccact
gagcacgtgagtggccagatgcagttcagggtggagctcacatccactggacctgacggg
gcctctccagactctatcatcggtgtgcccaataacggggcccctgggactccatcagat
gacgaggatctgccccacctactcccgggggtggttactggaggcccctcccctactggc
tccctgggctcacagaggtcctgggaaggcggggccacagcctatccagtcccagactac
agggactttagtggtacagagggcagaaccacagagggtgaatcctactctggccctcta
cggttgcagaggtccctgagcgaaggcctggatgccatcgaggcccccaagggccccgga
gagaggcccctgggcgctgcttcaccgaagctgcgctctagctttcccactcacacacgt
ctcagtgccatgctgcacattgactcagacgaagatgaggagcgctcggggcccactgac
atttacccggtgcccgggtcccccctgctgctcaacgggggtcccgaggggcctgaagaa
gaagacgttgtcccagagctacagcaggatcctgactctgagcagctggaacccagggtg
gtgggagatgaacagctgatggtaacgggggaagattgtgcccctggtggtgaatccaat
gtggcccctgagttagacctggccctcgacttcgaggactcctcagagcctgatgttttc
tcggaggtggaggaagttcctttcttctccgaggcgctgtcccagagtcttttggctgtg
ggcctggaggggccagaagagggccaggggcccgctgacaacccctcgtcgccgattgac
acctgctccatggcaatggccccacagacagtcttctcttcctcagagagttgcccaatc
acaatgtccacggctgaggaggcagaggagagggcagtagctgccattgacccaggggga
gactccttcactggcactccacccacccaccagcacgtagacgacgaggggggcgggcat
acatcagccaatgaggttgaaggagatgcgccgtctgcctatgcgctggagccaggggag
gagattagtgagcggatgtggagcttacaggtatctggggatgttccccaggatgaggag
ggggaggagccaagacccgcaggggtggccgtatctgttgattcagatgcagttgccatg
gaggcagatggagaagacggtgctcaagtgaacggtcaccccgtgcactgcctcccctca
gtgcgccatgacattcaccgttaccaacgagtggacgaaccgttacctcctaactgggag
gcgaggatcgatagtcatggtcgtattttctttgtcgatcacgtgaaccggaccaccacg
tggcagcgccccaccggaccccccgctccccagggcctgacccgctccagctccatccaa
cagatggagcagctcaaccgcagatatcagagcatcaggaggacgatgaccagtgagagg
tctgaggagaacacagttgacctcccgccagagcccacagagagtgactttctgccccag
accatccctgagtacaggagagagagcgcagtgggtcattccagctctcggtcgcgtctc
tctctgctgctccagtccccaagcgcaaagttcctgtgcagcacagacttcttcaccgtg
ctgcattctaaccctagtgcctacagcatgtttacgagcaacacctgcctgaagcacatg
atcagtaaggtgcgtcgggatgcccaccactatgagcgttaccagcacaatcgggacctg
gtggccttcctcaacatgttcaccaacagccagctggagctacccaggggctgggagatg
aagcatgaccagactggcaagcccttctttgtggatcacaactgtcgctccacaaccttc
atcgacccgcggctccccctccagagtgcacactcaactagcctgctggcccaccgacag
caccttaaccgccaacgcagccacagcgcaggcgaggttgtagatgacatgcgacactcc
agcccacctgtcgtgccctgcccctccagcaccttcagtgggtccactcgcaatcaggac
ctggtgcctgtggcctacaacgacaagattgtggcgtttctacggcaacccaacatcatt
gaaatcctgcaggagaggcagccagagctcgtcaggaaccactcactcaaggaaaggtta
cagttcattcgcagtgagggtgtttctgggcttgctcgtctctctagcgatgctgatcta
gtcattttgctcagcctgtttgaagaggaggttatgtcctatgtgccacctcatgcctta
ctgcaccccagctactgctcctcccctcagagctcccccggtactcagcgggcgaatgca
cgcgcccctgccccttacaaacgtgactttgaggccaaactgagaaacttctatcgcaag
ctggagacgaaaggctatggccagggacctgggaaagtcaaattgatcattcgtagagat
cacctattggaggatgccttcaatcagataatgtgctactcccgcaaagacctgcagagg
agtaagctctacgtcagctttgtgggcgaggaagggctggactacagcggcccctcgagg
gagttcttcttcctggtgtcgagggagctgtttaacccttactacggcctgtttgagtac
tccgccaacgacacctacactgtgcagatcagccccatgtctgccttcgtggacaaccat
cacgagtggttccgtttcagtgggcgtatcctgggcctggctctgatccaccagtatctg
ctggatgccttctttacccgcccattctacaagggcctgctgcgcatcccgtgtgacctg
agtgacctggagttcctggatgaggagtttcaccagagtttacagtggatgaaggacaat
gacatcgaggacatgctggacctcacctttaccgtcaacgaggaggtctttggacagatc
acagagagagagctgaagccaggcggggcaggtattccagtgtcagagaagaataagaag
gagtacatcgagcgtatggttaagtggcgcatcgaaaggggtgtggctcagcagacggag
agcctggtgcgaggcttctatgaggtggtggatgtgcggctggtatctgtgtttgatgcc
cgggagctggagctggtgatcgctggcactgcagagatcgacctggcagactggaggaac
aacacagagtacagaggagggtaccatgacaaccacatagtaatccgctggttctgggcg
gcagtggagaggttcaacaatgagcagaaattgagactgctgcagtttgtgacaggcacc
tccagtattccctatgagggctttgcctccctcagaggtagcaatggaccacgcaggttc
tgtgtggagaagtggggcaaaatcacctccttgcccagggcccacacatgctttaaccgt
ctggacctcccgccgtacccgtcgttctccatgctctacgagaaaatgctgacggctgtg
gaggaaaccagcacctttggcctggagtaa
DBGET
integrated database retrieval system
