Oncorhynchus nerka (sockeye salmon): 115107720
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Entry
115107720 CDS
T07952
Name
(RefSeq) heat shock factor protein 2-like isoform X1
KO
K09415
heat shock transcription factor 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115107720
Transcription factors [BR:
one03000
]
Eukaryotic type
Helix-turn-helix
Heat shock factors
115107720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HSF_DNA-bind
Vert_HS_TF
Motif
Other DBs
NCBI-GeneID:
115107720
NCBI-ProteinID:
XP_029487158
LinkDB
All DBs
Position
LG24:complement(10065078..10071566)
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AA seq
503 aa
AA seq
DB search
MKQNSNVPAFLTKLWTLVEDSDTNEFICWSQEGNSFLVMDEQRFSKDILPKFFKHNNMAS
FVRQLNMYGFRKVMHIDTGIVKQERDGPVEFQHHYFKQGQDDLLENIKRKVSNARPNDTK
VRQEDLSNILASVQNVHGKQESIDSRLNTLKRDNEGLWREISDLRQKHSQQQQIIKKLIQ
FIVTLVQKNRMSLKRKRPILLNSNGKKPKYIHEIYDDPPLDHNKPSVSGLKSADLTDDVV
ICDVTDDDTEITEGPSRALDQSDVEIVEVFNSNTVSQTDSADSIGQTNSLVIEPEETTIS
TYDSLPTSSTLQLNKQSGLSLEDPMKMMDSILNESGAISQNINLLGKVELMDYLDSIDCS
LEDFQAMLYGKQFSIDPDILEATEGSGGPKENAGLLSKGDKSSFSADNQLVQYTSCPLLA
FLDGCTPLATEADSSTATELGDSLLQHNTEVPTDLLEPDEEPPRSSLIRLEPLTEAEASE
STLFYLCELNPEGDTTDSTQLEI
NT seq
1512 nt
NT seq
+upstream
nt +downstream
nt
atgaaacaaaattcaaatgtaccagcctttctcaccaagctttggactcttgtggaagat
tctgacacaaatgaatttatttgttggagtcaggaaggtaacagtttccttgtcatggat
gaacagcgtttttccaaggatatccttcccaagttcttcaagcacaacaacatggccagc
tttgtcagacagctgaatatgtatggatttcgcaaagtgatgcacatcgacacaggcata
gtaaagcaagagagggatggaccagttgaatttcagcatcattactttaaacaagggcag
gatgacttgctggaaaacatcaaaagaaaggtttccaatgcaagaccaaatgatacgaag
gtcagacaggaagacctgtccaatattttggccagtgttcagaatgttcacggaaaacaa
gaaagcattgattccagactcaacacactgaaaagagataatgaaggtctatggagggaa
atatcagacctgagacagaagcactcccaacagcagcaaatcattaagaagttaatacaa
ttcatcgtcacattggtacagaagaaccggatgagtttaaaacgcaagaggcctattcta
ctgaacagcaatggaaagaagcctaaatacatccatgaaatctacgatgatcctcctctg
gaccacaacaaaccctctgtcagtggtttgaagagtgctgatcttactgacgatgtcgtc
atctgtgatgtaactgacgatgacacagagatcacagagggcccctcaagagcattggat
caatcggatgtagaaatagttgaggtcttcaacagcaatactgtgtcacagacagacagc
gctgacagtataggacagaccaactctttagtaatcgaaccagaagagaccaccataagc
acatatgatagccttcccacaagcagcaccttgcagctcaacaaacagtcagggttgagc
ctggaggatccaatgaagatgatggactcaatcctcaatgagagtggagctatttctcag
aatatcaatctcctcggcaaggttgagctgatggactacttggacagcattgactgcagt
ttggaagactttcaggctatgttgtacgggaagcagttcagcattgatccagatatttta
gaggccacagaggggagtggtggtcccaaagaaaatgcagggctgctatccaaaggagac
aagtctagtttctcagcagacaaccagctggtccagtacacatcctgccctctgctggcc
ttcctggatggctgcacccctttggccacagaggcagacagcagcacagccacagagctg
ggagacagcctgctgcagcacaacactgaggtccccacagacctgctggagccagacgag
gagcctccacgaagctctctgatccgcctggagcccctgactgaggcagaggccagcgag
tcaacgctcttctatctgtgtgaactcaacccagaaggtgacaccactgactcgacgcag
ctggagatttaa
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