Oncorhynchus nerka (sockeye salmon): 115107830
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Entry
115107830 CDS
T07952
Name
(RefSeq) TRAF3-interacting protein 1-like isoform X1
KO
K19680
TRAF3-interacting protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
one03037
]
115107830
Cilium and associated proteins [BR:
one03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B2
115107830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIP-T3_C
MIP-T3
Pneumo_att_G
Motif
Other DBs
NCBI-GeneID:
115107830
NCBI-ProteinID:
XP_029487354
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Position
LG3:complement(30770279..30810299)
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AA seq
669 aa
AA seq
DB search
MLLTERQVCRLKNSLVFINNFGEFVISAAAMNGSVAKKTQDTLGRVIKKPPLTEKLLSKP
PFRYLHDIFSEVIRTTGFMKGLYAETEMKSDNVKDKDAKIAFLQKALDVVMLVNGEPLSV
KPARIVAGHEPERTNELLQAIAKCCLNKLSSEEAVKRVLAGDKLDPKGKASSSRSQDKEN
REGRERQRDQVEKAIREHSAGGWEQKDPDLPKEQEGRRGDKEKERHRERERSKKSRDRDR
TKDRGKDKSRDKDNEKEKDRERDKESERDRDREKSKDKELHRGRDRERDKEKDLDRDKRR
EKERELRHKQGEEKTKVPEKGDKKARVSEETKHRPHQEEPSKTAKPEPAAEDDEQEPIED
ASEETAEVTYKQSDSPARIPRPSSAKGQRRWPKAGAQQEEFDSEDGDTPLAQRPVPLENG
DATDAVPAHMAHRRIPRPSSARPAPPRVKTQESYTDVTPAERLTSAKPPAAVITEGKKLS
EDEDEQFVVLEAAPLPPDMPEMEPTVDLQGDENHGGLVKKILETKKDFETSPSSPKSQDQ
TQSLVSEVSRKKERDLVSKEIERLRSSIQTVCRSALPLGKIMDYIQEDMDAMQNELHTWR
RENKEHGQALLHEQRVTDSAVEPLKAELAELEQLIKEQQDKICAVKSNILKNEDKIQKMV
TSINFSSRI
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgctattgacagagcgacaggtttgtcgattgaagaacagtcttgttttcatcaataac
tttggggaatttgtcatttcagcagctgccatgaacgggtcagtggccaaaaagacccaa
gacactttagggagagttataaagaaaccgccgcttactgaaaaactgctcagcaaaccg
ccgtttagatatctgcacgacatattcagtgaggtgatccggaccactggcttcatgaag
ggactctatgcagagactgagatgaagtcagacaatgtcaaggataaggatgctaagata
gcgttcctgcagaaggccctagatgtggtgatgctggtgaacggcgagcccctctcggtc
aagccagcgcgcattgtagccggccatgagcctgagaggaccaacgagctgctacaggcc
atcgccaagtgctgcctcaacaagctgtccagtgaggaggcggtaaagcgggtgctggcc
ggggacaagctggaccccaaggggaaggccagctcctcccggtcccaggacaaggagaac
agggagggacgagagcgccaacgagaccaagtggagaaggcgatccgagagcacagcgcc
gggggttgggagcagaaggacccagacctgcccaaagagcaagagggcagacggggcgac
aaggaaaaggagcgccaccgtgagagagaaaggtcaaaaaagagccgcgatcgagaccgt
accaaagaccgtggcaaggacaagagccgggacaaagacaatgaaaaagagaaagacaga
gaacgagacaaggagagcgagagggacagagacagggaaaagagcaaagacaaggagttg
cacagagggagagatcgagagagggataaggagaaagatttagaccgggataaacggcga
gagaaggagagagagctcagacacaaacagggggaggagaaaaccaaagtgccagagaag
ggtgacaaaaaggccagagtgtcagaggaaacaaaacacagaccacatcaagaggagccc
agtaaaactgccaaacctgaaccagcggctgaagatgatgaacaggagcctattgaagat
gcatctgaagagacagcggaagtcacatacaagcagtctgacagtccagccagaatacct
cggccttcatctgccaaggggcagaggcgctggcccaaagcaggagcccaacaagaagag
tttgacagtgaagatggagacactccgttggcacagaggccggttcccctggagaacgga
gatgccacagacgcagtgccagcccacatggcccacaggaggatacctcggcccagcagc
gcccggcccgcccctcctcgggtcaagacgcaggagagctacactgacgtgaccccagct
gaaaggctgaccagtgccaagcccccggcggccgtcatcacggaggggaaaaagctttct
gaggatgaagatgaacagtttgtggtgttggaggccgcccctcttccccccgacatgccc
gagatggagccaacagtggatctccaaggcgatgagaatcatggtgggctggtgaaaaaa
atccttgaaaccaagaaagactttgaaacatcaccatcatctccaaagtcccaagaccag
acccagagcctggtgtcggaggtgtccaggaagaaggagcgggacctggtgtctaaggag
attgagcggctgcgctcgtccatccagacggtgtgccgcagcgccttgcccctaggcaag
atcatggattacatccaggaggacatggacgccatgcagaatgagctgcacacctggagg
agggagaacaaggagcatgggcaggccctgctgcatgaacagagagtgacggacagcgcg
gtggagcctctgaaggccgagctagccgagcttgaacagttgatcaaggagcagcaggac
aagatctgcgccgtcaagtccaacatcctgaagaatgaggacaagatccagaagatggta
accagcatcaacttctcctcgcgaatatga
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