Oncorhynchus nerka (sockeye salmon): 115107864
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Entry
115107864 CDS
T07952
Name
(RefSeq) protein jagged-2-like isoform X1
KO
K21635
jagged-2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
115107864
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
EGF
MNNL
hEGF
EGF_TEN
DSL
EGF_2
JAG1
EGF_DL_JAG
JAG1-like_EGF2
EGF_Teneurin
EGF_CA
DUF6479
Motif
Other DBs
NCBI-GeneID:
115107864
NCBI-ProteinID:
XP_029487429
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Position
LG24:17102750..17202098
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AA seq
1257 aa
AA seq
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MWNCTRITNCLSILCLLLTIWTEVSKCSGYFELQLITVQNVNGELSDGECCDGTRNSQDL
RCSRDECDTYLKICLKEYQTEVTTTGSCTYGVGSTHVLGGNIFSFKNTKNNQNKINDAGK
VLISFQYAWPRAYSLIVEAWDWDNSTRNNDEELLIERSIHTGMINPGDHWQTIQHDGPVA
RLEYRIRLKCDENYYGSKCNKQCRPRDDYFGHYRCEQSGNRVCLEGWMGEDCQTAICKQG
CNLLHGDCSVPGECKCNYGWQGQFCDECVPYPGCVHGTCVIPWQCSCERNWGGLLCDKDL
NYCGRHQPCVNGGTCMNTEPDEYRCACPDGYSGKTCEIAEHACASDPCANSGTCHEVPSG
FECHCPPGWEGPTCANDLDECASSPCAQGGTCIDLENGFECVCPPQWGGKTCQIDANECV
GKPCVNAYSCKNLIGGYHCDCFQGWSGQNCDINVKGCHGQCQNGATCKEGPRGYLCQCPS
GFVGTHCEIQRNRCASGPCQNGGRCHSVLDGFVCECPTKFSGELCEVPGWSPSDPCEPTP
CENEAPCHALTGDFYCACPDGYEGKTCAHLRDHCRTTPCQVIDSCTIVVATNDSAGEGGF
RHISSNVCGPRGRCISQPRGNFTCFCDSGFSGTYCHENVNDCVSSPCRNGGTCIDGVNSF
QCFCPDGWEGRLCDLNVNECNRNPCKNGGFCVDLVNDFYCECTNNWKGKTCHSRESQCDA
NTCSNGGTCYDHGDAFRCACPPGRGGSTCNTAKNSMCVSSPCSNGGTCVGGGDSFTCICK
EGWEGPTCSQNTNDCNPHPCYNGGICVDGVNWFRCECAPGFAGPDCRINIDECQSSPCAY
GATCVDEINGFRCVCPLGRTGPQCQEFIGIGKSCHYAGLQFLHGSRWEEECNNCHCVDGK
VECTKVLCGRRLCLLPGSSKSTGEECAQAGPGGHECQEHSYLACFSPPCHRWGVCSSSSG
SGEPAPHDHTKCQPNSGHLDNSCARITLIFNRAKVPVGTTVENICSELRYLPATRSLAKD
HALLVLCDLSYTNQDAVEVAISFQPDEQPDHSLIQEAASTIVGTLSKRHNSTVMLAVIEV
KVETQVMPPTVDYLVPILCVVFCVLWLFCIIVCVWWTRKRRKERERRVPIDESVNNQWEP
LRPVGGRQQQPQLKDNNEAQQERKKLMGSPYRMRDGGEEEEEETEGEMEFEEEDVEAEAG
KGPVCKYSKTGVQSKGDVICTLRSLPLKTPIRTTTKDNLWKNVNASLAGQDVKDHFV
NT seq
3774 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattgtacaaggattacgaattgcctctcaatactgtgcctcctattgacgata
tggacggaggtgtccaagtgctctggctattttgagctgcaactgattaccgttcagaat
gtgaacggtgagttgtcggacggggaatgctgcgacggcacaaggaactcacaggatctg
cgctgtagtcgggacgagtgtgatacttacttaaaaatttgcttaaaggagtaccaaact
gaggtcacaaccactggctcttgcacctacggagttggatctacacacgttcttggtgga
aatattttttcttttaagaatacgaagaataaccaaaacaaaatcaacgatgctggcaag
gttctcatctcttttcagtacgcatggccgcgggcgtactccctcatcgtggaggcctgg
gactgggacaactccacccgcaacaatgacgaggagctgctgattgagcggagcatccac
acaggcatgatcaaccctggcgaccactggcagaccatccagcacgatgggcccgtggcg
cgcctcgagtaccgcatccgtctcaagtgtgacgagaactactacggcagcaagtgcaac
aagcagtgccggccacgtgacgactacttcggccactaccgctgcgagcagtccggcaac
cgcgtgtgcctggagggatggatgggcgaagactgccagacggcgatctgcaagcaaggc
tgcaacctgttacatggagactgctcagtcccgggggaatgcaagtgcaactatggctgg
cagggccagttctgtgacgagtgtgtcccctacccaggctgtgttcacgggacctgtgtc
ataccctggcaatgtagctgtgagcgcaactggggaggcctgctgtgtgacaaagatctg
aattactgtggcagacaccagccgtgcgtgaacggcggcacctgcatgaacacggagccg
gatgagtatcgttgtgcctgccccgatggctactctggcaagacctgcgagatagctgag
cacgcctgtgcgtccgacccgtgtgccaacagcggcacgtgccacgaggtcccttctggt
ttcgagtgccactgccctccggggtgggaggggcccacctgcgccaacgacttggacgaa
tgtgcgtccagtccttgtgcccagggcgggacatgcatcgatctggagaacggctttgag
tgtgtgtgccccccacagtggggtgggaagacctgccagatcgatgcgaatgagtgtgtg
gggaaaccgtgtgtaaacgcttactcttgcaaaaacttaattggcggatatcactgcgac
tgctttcaaggatggtctggacaaaactgtgacatcaatgtcaagggctgccacggccaa
tgtcagaatggagcgacgtgtaaggaagggcccagggggtacctctgtcagtgcccgtca
ggctttgtgggcacgcactgcgagatccagcggaacaggtgtgccagtgggccctgccag
aacggtgggcgctgccacagcgttttggacggctttgtgtgcgagtgcccgaccaagttc
tccggggaactgtgtgaggtcccaggttggtctccttcagacccatgtgagccaaccccc
tgtgagaacgaggcaccgtgccacgccctaacgggtgacttttactgcgcctgtcccgat
ggctacgagggcaagacctgtgcccacctcagggaccactgcaggaccaccccctgccaa
gtaattgacagctgcaccattgtcgtggcgaccaatgactccgcgggcgagggtggcttt
cgtcacatctcgtccaatgtgtgtggcccccggggacgctgtatcagccagccccgcggc
aacttcacctgcttctgtgactccggcttcagcggcacctattgccacgaaaacgtgaac
gactgtgtgagtagcccgtgtcggaacggaggcacctgcatcgatggagtcaactccttc
cagtgcttctgtcctgatgggtgggagggccggctctgtgaccttaatgtgaacgagtgc
aaccgtaacccgtgtaagaatggtggcttctgtgtggatctggtcaacgacttctactgc
gagtgtaccaacaactggaagggcaagacctgccactcccgtgagagtcagtgtgacgcc
aacacctgcagtaacgggggcacctgctatgaccacggggacgctttccgctgtgcctgc
ccccctgggaggggcggcagtacctgtaacacagccaagaacagcatgtgtgtgtccagc
ccgtgctccaacggaggcacctgtgtgggaggcggcgactccttcacctgcatctgcaaa
gagggctgggagggccccacctgctcccaaaacaccaacgactgtaaccctcacccctgc
tacaacggtggtatctgtgtggacggtgtcaactggtttcgatgcgagtgtgcccccggg
ttcgccggaccggactgtcgtatcaatatagatgagtgccagtcgtctccctgcgcgtac
ggtgccacctgcgtggatgagatcaacggcttccgctgcgtctgcccactggggcgaacg
ggcccacagtgccaagagtttattggtatcgggaagagctgccactatgccggcctgcag
ttccttcatggcagtcgatgggaagaggagtgcaacaactgccactgtgtcgatggcaaa
gtggagtgtacaaaggtcctctgcggacggcggctgtgccttctcccagggtcatcaaag
tcaacgggtgaggaatgtgcccaggcgggcccaggtgggcatgagtgccaggagcacagc
tacctcgcctgcttctcgcccccctgccatcgttggggggtgtgctcatcctcctccggc
agtggtgagcccgcaccccatgaccacaccaagtgccagcccaacagtgggcacctggac
aacagctgtgcccgcatcacgctcatcttcaaccgggccaaagtgccagtgggcacgacg
gtggagaacatctgttcagagctgagatacctgcctgccacccgatccctggccaaagac
cacgccctccttgtgctctgtgacctctcctacaccaatcaggatgctgtagaagttgcc
atatcgttccagccggatgagcagcctgaccacagtctgatccaagaggcggccagcacc
attgtgggcacgctgtctaagcgtcacaacagcacagtcatgctggctgtcattgaggtc
aaagtggaaacgcaggtcatgccccccacagtggactaccttgtgcccattctgtgtgtg
gtcttctgtgtactctggctcttctgcatcattgtgtgcgtgtggtggacacgcaagcgg
agaaaagagcgcgagaggagggtgcccatcgacgagagcgtcaacaaccagtgggagccc
ctgcggcccgttggaggacgtcaacaacaaccgcagctcaaagacaacaatgaggcccaa
caggagcgcaaaaagctcatgggctccccctacaggatgcgtgatggaggggaggaagag
gaggaggagacagagggagagatggagttcgaggaggaggacgtagaagcggaagcaggc
aaggggcccgtctgtaagtactctaaaaccggagtgcagtccaaaggggatgtgatctgc
actttgcggagtttgcccttaaaaacacccatccggaccaccaccaaagacaacctctgg
aaaaatgtcaacgcctccctggctggccaagacgtcaaagaccattttgtatga
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