Oncorhynchus nerka (sockeye salmon): 115107885
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Entry
115107885 CDS
T07952
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
one00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
115107885
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Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
115107885
NCBI-ProteinID:
XP_029487480
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Position
LG24:complement(18349766..18377548)
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AA seq
625 aa
AA seq
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MAGQTVSMKGPVCLIENDSDGKLCVVRSALDTLSQIEQHVVVVAVVGLYRTGKSYLMNKL
AGTNKGFALGATIQSQTKGIWMWCVPHPIKSDHTLVLLDTEGLGDVEKGDDSNDNWIFSL
AVLLSSTLVYNSMGTIDNYALEKLHYVTELTDLIKLKSVEGDIDESADYVRFFPSFVWAV
RDFGLELKLDRKPITAHQYLENALKLKQGTSNKIVKYNLPRDCLRKFFSPRWCFVFERPA
NSEKMKRMEELTDADLEPSFVKQSRDFCDHLFKEVKTKTMIGGLKVTGKMLGNLTEMYVD
MIRSGQVPCLDNAVVALAQIENSSALEKAKAYYQQSMAKMVVFPTETQQQLSMVHASMER
EAVAIFMNSSFKDEDQKYQKELMKALQEVYSTICEKNSQESQRACTHIIEHIFAPLKVQL
RNGSYMTPGGYKHYCDDLKMLTSEYRSTGGKGVKAEEVLKEYLNDKESTGQAILSADQSL
TEAELKAEEEKAKREASEQEKRTMEEQIRVQEMLMDDQKRTHEEHKKQLLEKMEADKENA
KVEYNRVLEAKLKEKEDLLKEGFHCKAQEMESQIEDLRKEQEEQEKAKPSKWKLALDNIG
TAALMIPGWGKLIGVGLKVGSHFMN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggcaggccaaacggtgtccatgaagggtccagtgtgtctaattgagaacgacagtgac
gggaaactgtgtgtggtccgcagcgcactggacaccctgagccagattgagcagcatgtg
gtagtggtggcagtggtcggcctgtaccgcaccggcaagtcatacctcatgaacaaactg
gctgggacgaacaaaggttttgcccttggagccacaattcagtcccagactaagggcatc
tggatgtggtgtgtgccccacccaataaaatcagaccacaccttggtgctgctggataca
gaggggctgggggatgtggagaagggtgatgatagtaatgacaactggatattttccctg
gctgttcttctgagcagcaccctggtgtacaacagcatgggcaccatcgacaactacgcc
ctggagaaactgcactatgtgacagaactgacagacctcattaagttgaagtcggttgag
ggagacattgatgaatctgcagactatgtccgtttctttccgtcttttgtgtgggcagtc
agagatttcggactagagttaaagcttgatagaaaacccatcacagcacatcagtacctg
gagaatgctcttaaactgaaacaaggtactagcaacaagattgttaaatacaacctgcct
cgtgattgtctgcggaaattcttttccccccgttggtgttttgtctttgaacgtcctgcc
aactctgagaaaatgaaacgcatggaggagttgacagatgctgacttggaaccctccttt
gtgaagcagtccagagacttctgtgaccacttatttaaagaagtcaagactaagaccatg
ataggtggcctgaaagtcactggtaaaatgctcgggaacctgacagagatgtacgttgac
atgatacggagtgggcaggtaccctgcctggacaatgctgtggtggcgctggcccagatt
gagaactccagtgcccttgaaaaggccaaggcctactaccagcagagcatggcaaagatg
gtggtctttcccactgagacccagcagcagctgtctatggttcatgcttccatggagagg
gaggcagtggccatcttcatgaatagttcattcaaggatgaagaccagaagtaccagaag
gagctcatgaaagcgcttcaagaagtatattcgacaatctgtgagaaaaactcgcaggaa
tcccagagggcatgcacgcacatcatcgaacacatatttgctcccctaaaggtccaactt
aggaatggttcctacatgacccctggaggatacaaacactactgcgatgatctcaaaatg
ttgaccagcgaatacagatcaacaggaggcaaaggagtgaaggctgaagaggtactgaag
gagtacctgaatgacaaggaaagcacaggtcaggccatcctgtcagcagaccagtctcta
actgaagctgaattgaaggccgaagaggagaaagcgaaaagggaggcgtctgagcaagag
aaacgaaccatggaagagcagatcagagtccaggaaatgctgatggacgatcagaagaga
acacacgaagagcataagaaacagctgttggagaagatggaggctgacaaggaaaatgct
aaagtagagtacaatagagttctggaggccaaactcaaggagaaggaagacctcctcaag
gaagggtttcattgcaaagcacaagaaatggagtcacagatagaggacctcaggaaggag
caggaggaacaggaaaaagctaagccctcaaagtggaagctagctctggataacattgga
accgctgctctaatgattccaggatggggcaaattaattggagttggtttgaaagttggg
tcacatttcatgaactga
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