Oncorhynchus nerka (sockeye salmon): 115107958
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Entry
115107958 CDS
T07952
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein U-like
KO
K12888
heterogeneous nuclear ribonucleoprotein U
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115107958
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
one03041
]
115107958
Spliceosome [BR:
one03041
]
Common components
Common spliceosomal components
hnRNP proteins
115107958
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_33
SPRY
SAP
AAA_17
Zeta_toxin
CPT
Motif
Other DBs
NCBI-GeneID:
115107958
NCBI-ProteinID:
XP_029487642
LinkDB
All DBs
Position
LG24:complement(23129565..23139463)
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AA seq
833 aa
AA seq
DB search
MSSINVKKLKVNELKDELKKRQLSDKGLKAELMDRLQAALDEEALAGDSPLGLEAAEGGF
PEGDDDATAAADDQEDMGEDEEDEGPVVESMDANEEEENGNGEGDAAVVNQCEEEENAAQ
EDDEMGEVEEEEMDPMLKEGVDDMEKITLDAEDGEPGDHPAEGDADKDTNADQKNKKGVK
RRREEHGRGYFEFIEENKYSWPSLKSPLPPLEEEDEEFDDTTVCLDNYNCDLHFKVSRDR
YSASSLTMESFAYLWSGGRASYGLSQGKACYEMKITEKIPVKHISSKNMDIHEVQVGWSL
ATGSLLLGEEEHSYAYSGKGKKTTNCVTEDFGETYDENDVICCLINFEGEEVEMSFSKNG
NEPVVAFQASKESLVGKALFPHVICHNCAVEFNFGQMDTPYFPQPEGYTFLQQVTMDDRV
RGPKAPDTKKDCEVIAMVGLPGSGKSTWVNKHIQENPGKYYILGSDTIVEKMMIGSLKRQ
AKDTTKLTAISQRAPLFLGKFIEIAARKKRNYILDHTNLSAPGQKRKMCLFAGYQRKAVV
VCPSDDDYKERAQKKAESDGKDVPEHALLKMKGFFTLPEEGESFAVVSYAELQKEDAAKL
VEQYKEESKAALPAEKKPNQGSLTPKRGGSVRGGGRGKNQFSRGGGPGQRGGGRGGFQQR
GNFRGAPGPRGGFTRPPRGFMPPPAFRGGFANRGNFNRGGALMAPQGGAPRGGPMRGHRG
GAMNRGGPPMSRGGGGHMSRGGGGHMSRGGGGHRGNFNQGFQPRAGNSRGNFGNKNGSGG
FGGGRNGGRGGGFGDNRTGGGFGMDKAQAFNQSWQQGFWNQKPWSQQYQPGYY
NT seq
2502 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaattaacgtaaaaaaactgaaagtaaacgagttgaaggacgagctgaaaaag
cgtcagctgtcggacaaggggttgaaggccgagttgatggaccggttgcaggccgcgctt
gacgaagaggccctggctggagattctccccttgggctggaggccgcggagggaggcttt
cccgagggagacgacgacgccaccgccgctgctgatgaccaagaggacatgggggaggat
gaagaagacgagggccccgtcgttgaaagcatggatgccaacgaggaggaagagaatgga
aacggagagggagacgccgctgtcgtgaaccaatgcgaggaggaagagaatgcggcccag
gaggacgacgaaatgggtgaggtagaagaggaagaaatggatccaatgctgaaggaaggt
gtggacgacatggagaaaatcacattggacgcagaagatggtgagcctggagaccatcca
gcagagggggatgcggacaaagacacgaatgctgatcagaagaataagaagggtgttaag
agacgccgggaggaacatggaaggggctactttgaatttattgaagagaacaaatacagc
tggcctagtctcaagtctccactgccacccctggaggaggaagatgaggagtttgatgat
acaacagtctgcctggacaactataactgcgacctgcacttcaaggtgtcccgggaccgc
tacagcgcctcctctctcaccatggagagctttgcctacctgtggtctgggggcagagcc
tcatacgggctgtcccagggcaaggcctgctacgagatgaagataactgagaaaatccca
gtgaaacacatatccagtaagaacatggacatccatgaggtccaggttggatggtcccta
gctactggcagtctgctccttggtgaggaggagcattcctatgcctactctggcaaaggc
aagaaaaccaccaattgcgtgactgaagatttcggggagacttatgatgagaatgatgtc
atctgctgcctcattaactttgaaggtgaggaggtggagatgtccttttctaagaacggt
aatgagccagtggtggccttccaggccagtaaggagtccctagtagggaaagcgctcttc
ccccacgtcatctgccacaattgtgcagtggagtttaactttggccagatggacacgccc
tacttcccccagccagagggctacaccttcctgcagcaggttaccatggacgaccgtgtc
cgcggacccaaggcacctgacaccaagaaggactgcgaggtgattgccatggtgggcctg
cctggctcaggaaagagcacctgggtcaacaagcacatccaggagaaccctgggaaatat
tacatcctgggcagcgacaccatcgtggagaagatgatgattggcagtttgaagcgtcag
gcgaaggacacaacaaagctcacggccatttcccagcgtgcacctctcttcctgggcaag
ttcattgagatcgctgctcgcaaaaagaggaactatatcctggaccacaccaacctgtct
gccccgggccaaaagaggaagatgtgtctatttgctgggtaccagcggaaggctgtggtg
gtctgtccctcagacgacgactacaaggagagggcccagaagaaggcagagagcgacggg
aaagacgtgcccgagcacgctctcctcaaaatgaaaggattcttcaccctgccagaggaa
ggcgagagcttcgctgtggtgagctacgctgagctgcagaaggaggatgccgccaagctg
gtggagcagtacaaggaggagagcaaggcggccctgccggctgagaagaagcccaaccaa
gggtctttgacccccaagagaggagggagtgtccgggggggaggcagaggcaagaaccag
ttcagccgtggaggtggacctggccagagaggaggtggacgaggtggcttccagcagaga
ggcaacttccgaggagctccaggcccacgtggtgggttcactcgcccccctagagggttc
atgccccctccagccttcagaggtggattcgccaaccggggcaacttcaacaggggcggc
gccctcatggccccccaaggaggggccccaagaggaggaccgatgaggggccacaggggt
ggggccatgaacagaggtggtcctccaatgagccgaggaggcggcggtcacatgagccga
ggaggcggcggtcacatgagccgaggaggcggcggtcacaggggcaacttcaaccagggg
ttccagcccagagcaggcaacagccgtgggaattttggcaacaagaatggcagcggtggg
tttgggggcggcaggaatggtggacgtggcggcggatttggagacaacaggactggtgga
ggatttggcatggacaaggctcaggccttcaaccagagctggcagcaagggttttggaac
cagaagccatggagccagcagtatcagccaggatactattaa
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