Oncorhynchus nerka (sockeye salmon): 115107987
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Entry
115107987 CDS
T07952
Name
(RefSeq) leucine-rich repeat and fibronectin type-III domain-containing protein 5-like
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
one04990
]
115107987
Domain-containing proteins not elsewhere classified [BR:
one04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
115107987
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
I-set
Ig_3
LRR_4
LRR_5
ig
LRR_1
Ig_2
fn3
LRR_9
Sp38
V-set
DHU1_N
Motif
Other DBs
NCBI-GeneID:
115107987
NCBI-ProteinID:
XP_029487685
EnsemblRapid:
ENSONEG00000042180
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Position
LG24:24608605..24629687
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AA seq
823 aa
AA seq
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METLLVYLMVLGMAVKAHKVQLCPKRCVCQMLNPNLATLCDKKGLLFVPPNIDRHTVEMR
LGDNFVTSIKQRDFANMTKLQDLTLSRNTIGSISPHAFKDLENLRALHLDSNRLTRLTND
TFSGMSKLHHLILNNNQLIHIHIGAFNDLTALEELDLSYNNLESTPWVAIQRMTSLHTLG
LDHNMLSYIPIGTFSGLQKLKRLDVTSNKLQKLPPDPVFQRAGVLATSGSMGPSSFALSF
GGNPLRCNCELLWLRRLRREDDLETCAAPQHLAGRYFWTVSEEEFLCEPPLITRHSQELR
ALEGQSVALRCKARGDPDPIIHWIAPDGRLMSNSSRAVVHSDGTLDILITTVKDSGSFTC
VASNPAGEAQQTVDLVIVKLPHITNSTVKKEPNPGSSDIATVMKTGGGGEGGGMVPLGNT
KTSQEKKVVITEATSTSVLVRFNFQRSIPGIRMFQIQYNGTYDDSLVYRMIPSSSKSILV
NNLAAGTQYDLCVLAIYDDLVTSLTATRVVGCVRFTTEPQYLRCHFMQSQFLGGTIVVII
GGIIVASVLAFIIFLIVRYRVCNQGDEDKALEMGEIPSLSSDGQLQGCGVPKAMSKSLSK
QILQPEKPETEDKESLRVALPPRKPVKQQQQQQPPAPTTTTSTKPSIPDCTVSTSAASHS
WHPASPVTLRQKRADFTVAGGSKPGETRRAEGQTDVELENTNRNNSSEAKMAAALAVPVP
ARSTKWTPVARRPRPPGASSHHYMTVPAGGVRVNRRHSLNVDSYKERCYVSLVQQQPKPG
GSLCSKRSLSMSGELPTLESAMANIRRGRDKLSRSEWLLESTL
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggagaccctgctagtttacctgatggtccttggcatggctgtaaaggcccacaaggtc
cagctgtgcccaaaacgctgtgtctgccagatgctcaaccccaacctggcaaccctctgc
gacaagaagggcctcctcttcgtcccgccaaacatcgaccggcacaccgtcgagatgcgt
ctgggcgacaacttcgtcacgagcatcaaacagcgggactttgccaacatgaccaagctt
caggacctgacgttgtctcggaacaccatcggttccatctcgcctcacgcctttaaagat
ctggagaacctcagggccttgcacttggacagcaaccgtctgacgaggctcaccaacgac
accttcagtgggatgtccaaacttcaccatctcattcttaacaacaaccaactgattcat
atccacattggggccttcaatgatctcacggctctagaggagttagatctgtcctacaac
aacttggaaagcaccccctgggtggccatccagagaatgaccagcctccacaccctgggc
ttggaccacaacatgcttagttacatccctataggaaccttctccggcctgcagaagctc
aaacggcttgatgtcacctccaacaagctccagaagcttccgccagaccctgtgttccag
cgggctggggttctggccacgtcaggaagcatgggtccgtcgtcattcgcgttgagtttt
ggggggaacccactgaggtgtaactgtgagctgctgtggctgaggaggctgaggcgggag
gatgatctggagacgtgtgcggctccgcagcacctggctggacggtacttctggaccgtg
tctgaagaagagttcctctgtgagccgcctctcatcaccagacactcccaggagctgcga
gcgctggagggtcagagtgtagctctgcgctgtaaggccaggggtgacccagaccccatc
atccactggattgcgccagacggccggctcatgtccaattcctcccgggccgtggtgcac
agtgacgggactctggacatcctcatcaccactgtgaaggactcaggctccttcacctgt
gtcgcctccaacccggccggggaggctcaacaaactgtggacctggtgatcgtcaaactc
ccacacatcaccaacagtactgtgaagaaggaaccgaaccccggttcttctgatatcgcc
acggtaatgaagacgggtggtggtggggagggcggaggcatggtgccactgggaaacaca
aagacgagccaggagaagaaggtggtgatcactgaggcaacgtctacctccgtcctggtc
aggttcaacttccagaggagtataccaggcatccgaatgttccagatccaatacaacgga
acctacgatgactctctggtttacagaatgatcccttcgagcagtaagagtatcctggtg
aacaacctggcggccggtactcagtacgacctgtgtgtactggccatctacgatgatctg
gtgacctccctgactgccacgcgagtggtggggtgcgtccgcttcaccaccgagccacag
tacctccgctgccacttcatgcagtcccagttcctgggagggaccatcgtggtcatcatc
ggagggatcatcgtggcgtccgtcttagctttcatcatcttcctcatcgtgaggtaccga
gtgtgtaaccaaggcgatgaggataaggctttggagatgggtgagatcccatctctgagc
agtgacggtcagctccagggctgcggtgtccccaaggccatgtccaaatctctgtccaag
cagatcctccagccagagaaaccagagacggaagacaaggagtctctgagggtggccctt
cctcctcgcaaaccggtcaagcagcagcagcagcagcaacccccagccccaaccaccacc
acatctaccaagccctccatccccgactgcactgtctctacttccgcagccagccactcc
tggcaccctgcctccccggtcaccctgaggcaaaaacgggccgatttcactgtcgccgga
ggttcgaaacccggagaaacccgccgagccgaaggccagacggatgtggagttagagaac
acaaaccgtaataactcgtcggaagccaaaatggctgccgccttggccgtacctgttcct
gcccgttccacaaaatggacgccggtcgctaggcggccgcgcccccctggagcctcgtcc
caccattacatgacggtaccagcagggggtgtgagggtgaaccggcggcactcactgaac
gtggactcgtacaaggagcgctgctatgtcagcctggtacagcagcagccaaaacctggc
gggagtttgtgctccaaacgcagtctgtccatgagtggagaattgcccacgttggagagt
gcaatggcaaacatacgcagaggcagagacaagctgtcccgatctgagtggcttcttgaa
agcactctatga
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