Oncorhynchus nerka (sockeye salmon): 115108001
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Entry
115108001 CDS
T07952
Symbol
gpcpd1
Name
(RefSeq) glycerophosphocholine phosphodiesterase GPCPD1 isoform X1
KO
K18695
glycerophosphocholine phosphodiesterase GPCPD1 [EC:
3.1.4.2
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00564
Glycerophospholipid metabolism
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
115108001 (gpcpd1)
Enzymes [BR:
one01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.2 glycerophosphocholine phosphodiesterase
115108001 (gpcpd1)
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Motif
Pfam:
GDPD
CBM_20
C2_GDE1
TreTu_C
Motif
Other DBs
NCBI-GeneID:
115108001
NCBI-ProteinID:
XP_029487710
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Position
LG24:25637996..25660183
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AA seq
671 aa
AA seq
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METTQVTLAVRGDTSPGEVIAVVGSCEALGGWCHQRAVTLQPVEHDGTLWKRTVSVPRGA
VPTYRYFKGHFLESKSAGGPCQVIVTKWETHQQPRLMSPTESHLDIDDGQFGFHNGSVCI
DSGWLTCQTEIRLRLHFSKTSPVSITKKKYKKSRFRIKLTLEGVEEEDDEDEELEQSAAS
WHKMTTTLETSMISGDGYKSRHSQPECGYALEPSQWTEYIIHSMDPDNLELTFDFFEEDM
GEHVMPGDAHPGTAGTACLLSSFFVESGKDTGVVTLPIMKRNSRQTLGKVRVDFLVIRPI
EGLQCDMSSSFTKYWRKRSTPLDVGHRGAGSTHAAKHTKVRENTIASFKSAANHGAAYVE
FDVHLSKDCVPIVYHDLTCCISTKKKGDKHSLELFEVPVKDLTYDQLQQLKLGHASALKV
NDHKDDDDEEEVDEHQPFPSFSQIFHAVPENVGFNIELKWICQMKDGSWEGNLSSYFNMN
LFLDIILSCVLQRAGKRRVVFSCFDPDVCTMVRQKQNKYPILFLTQGISETYPELMDIRC
RTTQIAMSFAQSENILGISAHTEELLQNLEHIREAQSKGLVVFCWGDLNNDHDNRTKLRE
QGIDGLIYDRICDDQVEQANVFKVEEQHTLQETLKSFVCSCYSIPCQAPICAANSKVHNG
SAESDSGLSSS
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atggagacaactcaagtgactttggcagttaggggagacacatccccaggtgaggtgata
gctgtggttggtagctgtgaagctttaggaggctggtgccatcaaagagctgtgacccta
caaccggttgaacacgatggcacattgtggaagaggaccgtcagtgtgcccagaggtgct
gtgccaacctatcgttacttcaaaggccacttcctggagtcaaagagtgcaggtggtccc
tgtcaggtgatagtcactaagtgggagacccatcagcagccacgtctgatgagccccaca
gaatcgcaccttgatattgacgatggccaatttggattccacaacggctcagtgtgtata
gactctgggtggctgacgtgccagacagagatccgtctgcgtctgcacttctccaagacg
tctcccgtatccatcaccaagaagaaatacaagaagtctcgcttcaggatcaagctgacg
cttgagggtgtggaggaggaggatgatgaagatgaagagctggagcagagtgcagcgtca
tggcacaagatgaccaccacgctggagaccagtatgatcagtggagatgggtacaagtcc
cgccactcccagcctgagtgtggttacgccctggagccctcacagtggacagagtacatc
atccactccatggaccccgacaacctagaactcacctttgacttctttgaggaagacatg
ggcgagcacgtgatgccaggggatgcccacccagggacggcgggtacggcctgcctcctc
tcctcattcttcgtggagagtggcaaggacaccggcgtggtcactctgcccatcatgaaa
cgcaactccagacagaccctgggcaaagtccgagtggacttcctggtgatccgtcctatc
gagggactgcagtgtgacatgagctcctccttcaccaagtactggaggaagaggagtacc
cccctggacgttggccacagaggggccgggagcacacacgcagccaaacataccaaagtc
agggagaacaccattgcttcattcaaaagtgctgccaatcatggggctgcctacgtggag
tttgatgtccatctctccaaggactgtgtccccatcgtgtaccacgatctcacctgttgc
atctctactaagaagaaaggagacaagcactcgttggagctgtttgaagtgccggtcaaa
gatctcacatacgaccagctacagcagctcaagctgggccatgcttctgccttgaaggtg
aacgaccacaaagatgacgacgacgaggaagaggttgacgaacaccagcccttcccttca
ttctcgcagatcttccatgcagtgcctgaaaatgtgggcttcaacatcgagctgaagtgg
atttgtcagatgaaggatggttcgtgggaaggaaacctgtcctcgtacttcaacatgaac
ctgttcctggacatcatactgagctgtgtgctgcagagagccggcaagagacgtgtcgtc
ttctcctgcttcgaccctgacgtctgcaccatggttcgtcagaagcagaacaagtacccc
atcttgttcctgacccagggcatctctgagacctatcctgagctcatggacatccgctgc
aggaccacacagatcgccatgagctttgcgcagagcgaaaacatcctgggtatcagtgcc
cacacagaggagctgcttcagaacctggagcacatccgagaggctcaatctaaaggcctg
gtggtgttctgctggggagacctcaacaacgaccacgacaacaggaccaagctaagggag
cagggcatcgacggactcatctatgacaggatctgtgacgaccaggttgagcaggccaac
gtcttcaaagtggaggagcagcacactctgcaggagactctgaagagctttgtgtgttcc
tgctactccatcccctgccaggcgcctatctgcgccgccaactcaaaggttcacaacggc
agtgcagagtccgactcgggcctcagctcttcctga
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