Oncorhynchus nerka (sockeye salmon): 115108004
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Entry
115108004 CDS
T07952
Symbol
gzf1
Name
(RefSeq) GDNF-inducible zinc finger protein 1
KO
K22402
GDNF-inducible zinc finger protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115108004 (gzf1)
Transcription factors [BR:
one03000
]
Eukaryotic type
Zinc finger
Cys2His2 BTB-ZF factors
115108004 (gzf1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
BTB
zf-C2H2_jaz
zf-C2H2_16
zf-C2H2_6
zf-C2H2_PRDM15
C2CH-3rd_BIRD-IDD
zf-C2H2_8
zf-met
DUF7128
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
115108004
NCBI-ProteinID:
XP_029487717
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Position
LG24:complement(25675568..25681841)
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AA seq
874 aa
AA seq
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MSDQVVQLSSAFHHEDMLQSLHQLRLHGHLCDVTVQVDFQGELEEFEAHQAVLAASSGYF
KNILLAPDPPKKLFLGNVRTTDFTRFLEYVYTGKLEVDKEFAKDKIGVIHEVATLLECKS
LVQACSSVLYEGSLSLHRVEASMSQDMEADLYDVGEEDGALGVGVNKVPKIASTKRLTPP
TKPERGEKRAKVAVTAEEERSEVNKDTEVSGRRSNRLAGRRVFIDIPKKKYVRKMKDQTM
AQMEDLPDNNTQTTSQEENTYNTREAEEALPEPLPKKEGAGLESTDVDDEDEVEEGDIPE
DCPDDSLFLPSKEEEGEEEGEERATNRSSRRIDTQYKCDKCQRTFHYEKSYLKHIKTSHS
VQGEVTYRCDTCQQTFANRCNLKIHQRHVHSDERLFPCDVCTKTFKRKKDVTRHRRQVHE
GGGERHTCLVCNKALSSKTALTLHERTHTGDKPYSCTDCEAKFSQSSALKTHRRTHTGEK
PFACDQCDARFTQNHMLSYHKRAHTGEKPFMCESCGKSFASKEYLKHHSRIHTGSRPYKC
EQCGRAFAQRNSLHQHMKIHTGERPYHCTDCDKQFTQLNALQRHQRIHTGEKPYMCGLCN
RTFTDKSTVRRHTMTHDQNTPWKNYLVVLKDNMEKKTKKPRSLGRKVKIETVVREVEGDS
GAGGRLQEGTILVPGEPITLSASWGDPGTIALVSHTTLGGFTVIQTEMPAGTQLPIVTTD
CTGASVISLDGSTVSVPFTIPVSMSSISVSSSSSGILPVQTVSVSVPVTVSGAIFAPVSE
TSLSTSCVLETAVSQTILAPDLEAGPCSDTTAIADPEDAVSECAPISEECVTVQTSELET
ETPSAAVSNEEQHSVPEDIGTVEDLEVSTEDTVV
NT seq
2625 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaccaagtggtccaactctcctcagccttccaccatgaggacatgcttcagtct
ctgcaccagctcagactacatggtcacctgtgcgatgtcacagtccaggtggacttccag
ggtgagctggaagagtttgaggctcaccaggcggtcctagctgcctccagcggctacttc
aagaacatcctactggcaccggacccacccaagaaactattcttggggaacgttcgaacc
actgatttcaccaggttcttggaatatgtatacactggcaaactggaggtggataaagag
tttgctaaagacaagattggtgtaatacatgaagtggcgacactgttggagtgtaagagc
cttgtccaggcctgcagctcggttctctatgaaggcagcttgagtctgcacagggttgag
gcatccatgtcacaagacatggaagctgatttgtatgatgtaggagaggaggatggggcg
ctgggggtcggagtcaacaaagttcccaaaatagcctccaccaagaggctgacccctcca
actaaaccagagagaggggagaaaagggcaaaggtcgcggtcacagccgaggaggagagg
tcagaggtgaataaagacactgaggtctctgggaggaggagtaacaggctggcagggcgc
agagtcttcattgacattcctaagaagaagtacgtgaggaagatgaaggaccagaccatg
gcgcagatggaagatctgcctgacaacaacactcagacaaccagtcaggaggagaacact
tacaacacacgggaggcagaagaggcccttccagagccgctgcctaaaaaagagggggcg
ggactggagtcgacagacgttgatgatgaagatgaggtggaagagggagatataccagag
gattgtccagatgactccctcttcttgcccagcaaggaagaggagggtgaggaggaggga
gaggagcgtgccaccaacagatcatccagacgtattgacactcaatacaagtgtgacaaa
tgtcaacggaccttccactatgagaagagctacctgaagcacatcaagacgagccacagt
gtgcagggggaggtgacgtaccgttgtgacacctgccagcagaccttcgccaaccgctgc
aacctgaagatccaccagagacacgtccacagtgacgaaaggctgttcccctgtgacgtc
tgcaccaagaccttcaaacgcaagaaggacgtgacgcgccaccgacgacaggtgcacgag
ggaggcggtgagcgacacacctgtcttgtgtgtaacaaggcgctgagctctaagacagcg
ttgacgctacacgagagaacacacacaggagacaagccctactcttgcactgactgtgaa
gccaagttctcccagagctcagccctcaagacacaccgcaggactcacacaggagagaag
cctttcgcctgtgaccagtgtgatgcgaggttcacccagaaccacatgttgtcctatcac
aaaagggcccacacgggagagaagccttttatgtgtgagagctgtgggaaaagctttgcc
tctaaagaatacctgaaacaccactccagaatccacacaggctccaggccttacaagtgt
gaacaatgtggtcgggctttcgcccagagaaactccctccaccagcatatgaagatacac
acaggtgagcgtccgtaccactgtacagattgtgataagcagttcacccagctgaatgcc
ctccagaggcaccagaggattcatacaggggagaagccctacatgtgtggcctctgcaac
cgtaccttcacggacaagtccaccgtacgcaggcacaccatgactcacgaccaaaacact
ccatggaagaactacctggtggtcctcaaggacaacatggagaaaaagactaagaaaccc
agaagccttggtagaaaggttaaaatagagactgtggttcgggaggtggaaggggatagt
ggagctggaggtaggctccaggaggggaccatattggttcctggtgagcccatcaccctc
tcagccagctggggcgacccagggaccatcgccctggttagccacaccaccctgggtggg
ttcacggtcatccagacagagatgccggctgggacccagctacccatcgtcaccacagac
tgcaccggggccagtgtcatctctctggatggatccactgtctctgtcccctttactatc
cctgtctctatgtcctccatctctgtgtcctcgtcctcctctggcatcctccctgtccag
actgtgtctgtctctgtcccagtcactgtttcaggggccatatttgccccagtttcagag
accagtctttcaacttcatgtgttctggaaactgcagtgtcacagaccatcttggctcca
gatttggaagctgggccgtgttcagatacgacggccattgcggatcccgaggatgcagtt
tcagagtgtgcccctatctctgaggagtgtgttacagtgcagacatcagaactggagact
gagacaccgagcgctgctgtctctaatgaggaacaacacagtgtaccagaggacattggt
actgtggaagacctggaggtgtccactgaagatactgtggtgtag
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