Oncorhynchus nerka (sockeye salmon): 115108041
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Entry
115108041 CDS
T07952
Name
(RefSeq) signal transducer and activator of transcription 1-alpha/beta-like isoform X1
KO
K11220
signal transducer and activator of transcription 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04217
Necroptosis
one04620
Toll-like receptor signaling pathway
one04621
NOD-like receptor signaling pathway
one04625
C-type lectin receptor signaling pathway
one05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
115108041
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
115108041
04621 NOD-like receptor signaling pathway
115108041
04625 C-type lectin receptor signaling pathway
115108041
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
115108041
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115108041
Transcription factors [BR:
one03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
STAT
115108041
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
STAT_alpha
STAT_bind
STAT_int
STAT_linker
STAT1_TAZ2bind
SH2
STX6_10_61_N
THP2
DUF4107
Motif
Other DBs
NCBI-GeneID:
115108041
NCBI-ProteinID:
XP_029487793
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All DBs
Position
LG3:complement(31786165..31816428)
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AA seq
763 aa
AA seq
DB search
MAQWFQLQKLDSKYLEQLDQLYDDTFPMEIRQYLSAWIESHDWDTVATSVSLAMVRFHDL
LGQLDNQYSRFALENNFLLQHNVRKIKRKLQDHFQENPLHMAMTICKCLKEEKKILACAL
KKEENVRSTQNNVVLEKQKELDNNVNDLRNQVQDVEQEMKSLEDLQDEHDFKKKTLQSRG
TVCDSMYLSVEQEVNGMTQSPVVQKEIREEEMVIREMFIKLNVTREVVVHQIAYILNLAE
QIQYTLVTEEIPDWKHRQQIACIGGPPNACLDQLQTWFTAVAEGLQQVRQQLKKLQELEQ
KYTYENDPITQGKSTLEERALVLFKTLIVNSIVVERQPCMPTHPQRPLVLKTGVQFTVKI
RLLVKLQELNYQFKVKALFDKDVTERNAVKGFRKFNIFGTNTKVMNMEESNGSLAAEFRH
LQLKEQKATGNRTNDGPLIVTEELHSISFETQLTQPGLQVNLETTSLPIVVISNISQLPS
AWASVMWYNMLTSESKNLLFFLSPSQATWSQLSKVLSWQFSSVTKRGLNDEQLSMLGDKL
LGREAVGNPNGLIPWTMFCKNVNEKGFPFWLWIDGILDLIKRHLMCLWNDGCIMGFVSKE
REKALLKDKEPGTFLLRFSESSREGAVTFTWVEHSNNDVHFHTVEPYTKKELAAVSFPDI
LHNYKVMAAENIPENPLVYLYPRIPKDSALARYYSRPTEAAEPMEMESESDAGYVKRELI
SVSEIHSRLQDTMMPMSAEVYGELTRIINPAEIDTVMCKAFPN
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggcccagtggttccagctgcagaaattagactccaagtacctggagcagttggaccag
ctgtatgatgatactttccccatggagatccgccagtacctcagtgcgtggattgagagc
catgactgggacacggtggcaaccagcgtttccctggcgatggtccgtttccatgacctc
ttgggccagttggacaaccagtacagccgcttcgccctggagaacaacttcctgttgcaa
cacaatgtacgcaagattaaacgcaaactgcaggaccactttcaggagaaccctttgcac
atggccatgactatatgtaaatgtctgaaagaggagaagaaaatcctggcctgtgcctta
aaaaaagaggaaaacgttcggtccacacaaaacaatgtggtgttggagaaacagaaagag
ttggacaacaatgtcaacgacctgaggaaccaagtacaggatgtagagcaggaaatgaag
tcactggaggacctacaggatgaacatgactttaagaagaagaccctgcagagccgaggt
actgtttgtgactctatgtacttgtcagtggaacaagaggtgaatgggatgacacagtca
ccggtggtacagaaagagatccgtgaagaggagatggtcatcagagagatgttcatcaaa
ctcaacgtaaccagagaggtggtggtgcatcagatagcttacatcctgaacttggccgag
cagatccagtacaccctggtgacagaggagatacctgattggaagcacagacagcagatt
gcctgtatcggtggtccacctaatgcctgtctagatcagctacaaacctggttcactgcg
gtggcagagggcttacagcaggtacgccagcagctgaagaaacttcaggagctggaacag
aagtacacatacgagaacgaccccatcactcagggcaaaagcactctggaggaacgcgct
ctcgtcctgttcaagaccctcattgtcaattctatcgtggtggagagacagccctgtatg
cccactcacccccaaagacctctggtgctgaagactggggtgcagttcactgtcaaaatc
agactgctggtgaagcttcaggagttgaactaccagttcaaagtcaaagctctgtttgac
aaggacgtgactgagaggaatgcagtgaaagggttccggaaattcaacatctttggaact
aatactaaagttatgaacatggaggagtccaatggaagcttggcagcagaattcagacac
ctgcaactaaaggagcaaaaggctacaggcaacagaacaaacgacggtcctctcatagtg
acagaggagctccactccatcagctttgagacacaactcactcagccaggactccaggtc
aacctggagacgacgtccctgcccattgtggtcatctccaacattagccagctgcccagc
gcctgggcctctgtcatgtggtacaacatgctgaccagtgagtccaagaatctgctgttc
ttcctgagcccgtcccaggccacctggagccagttgtcgaaggtgctgagttggcagttc
tcctccgtaaccaagcgaggcctcaacgacgagcagctgagcatgctgggagacaagctc
ctgggtcgagaggctgtaggaaatcctaatggactcatcccctggaccatgttctgcaag
aatgtgaacgagaagggctttcccttctggctgtggatcgatggaatcctggacctgatc
aagagacacctcatgtgtttgtggaatgacgggtgtatcatgggctttgtcagtaaggag
agagagaaggccctgctgaaggacaaggagcctgggactttcctgctgcgtttcagcgag
agcagccgggagggagccgtcacctttacctgggtggagcactccaataacgatgtccat
ttccacacggtggagccctacactaagaaggagctggccgccgtctctttccctgacatc
ctccacaactacaaggtgatggctgccgagaacatccctgagaaccctctggtctacctc
taccccaggatccccaaagacagcgccttagcacgctactacagccgccccacagaagcc
gctgagccaatggaaatggagagtgagtctgatgctggctacgttaagagggagcttatc
tctgtgtctgaaatccactccagactacaggacaccatgatgcccatgagtgctgaagtg
tacggagagctgaccaggattattaaccctgctgagattgatactgtgatgtgcaaagct
ttcccaaactaa
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