KEGG   Oncorhynchus nerka (sockeye salmon): 115108071
Entry
115108071         CDS       T07952                                 
Name
(RefSeq) lysine-specific demethylase 4B-like
  KO
K06709  [histone H3]-trimethyl-L-lysine9/36 demethylase [EC:1.14.11.66 1.14.11.69]
Organism
one  Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:one00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:one03036]
    115108071
Enzymes [BR:one01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.66  [histone H3]-trimethyl-L-lysine9 demethylase
     115108071
    1.14.11.69  [histone H3]-trimethyl-L-lysine36 demethylase
     115108071
Chromosome and associated proteins [BR:one03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    115108071
SSDB
Motif
Pfam: JmjC zf-HC5HC2H_2 Tudor_2 zf-HC5HC2H PHD_2 JmjN PHD DUF4537 Agenet Tudor_5
Other DBs
NCBI-GeneID: 115108071
NCBI-ProteinID: XP_029487864
LinkDB
Position
LG24:complement(33297318..33380213)
AA seq 1196 aa
MSLTAPPDPTATMSLEASTPAPDLAPAPDLAPAPDLAPAPDLAPAPDLVPDPAPDLAPEL
TPDSAQAPELASDPAPTPAPPVPVMNPGCKIMTFRPTMEEFKDFAKYVAYMETQGAHRAG
LAKVIPPKGWKPRQSYDTIEEMVIPAPIMQVVTGQSGLFTQYNIQKKSMTVGEYRQLANS
RTYCTPRHKDFDDLERKYWKNLTFVSPIYGADVSGSIYDPEIGEWNIGHLNTLLDMVEQE
CGIVIEGVNTPYLYFGMWKTTFAWHTEDMDLYSINYLHFGEPKSWYAVPPEHGKRLERLA
QGFFPGSSQGCDAFLRHKMTLISPSILKKYSIPFDRITQEEGEFMVTFPYGYHAGFNHGF
NCAESTNFATLRWIDYGKMATQCTCRKDMVKISMDVFVRCLQPERYEQWKQGKDGTVLDH
QRPTTLNSPELEHWRANRVTYREKLLQRALQKKEQLRRLKLEEVKVLAEEGIELDAVAYQ
RQVEEREAQRRQDREERMAREALETLEAMDREDRERQEALAAQAARGLPDPQVDPRHLTA
NGEKKKKKKKKKKQPALPSDPMNSFQAAFEKFATFKIPQIPKQPKGSNDTDLPAEGKLDV
NGMQQSSSYSKQLKMRMEVKKSRRHPLSKPPMRSPLSIVKQETSSDEELFSPWPLDGDVK
KAGHLWQNRTPNFLAEKGFNAAVATLEPYCAVCTLFCPYTQKDSSYPTDSPGAPNHHSVS
RCGSRTHPLVPEMCFSAGAGNTEPPPSNSHTGDDGTSPLLSCSSCSLQVHSSCYGVRPDT
VHNGAWKCLRCTALAWTADCCLCNLRGGALKMTTDNRWVHVICAIAVAEARFVNAVEREP
VDISAIPENRKSLKCVYCHKNTKQMCGACIQCSHDSCSTSFHVTCAHIAGVLMKPADWPY
VVSVTCHKHKKTNHKARAGPRGEFSLGQKVIGRNSDGWFYPCTIIGMSSHTFYEVNYDDG
SYCDNLFPENIVSHDCLRNGPPEMGELMLVHTAEGKALNASYVRDHVHKHYQVEFQDESQ
LLLKQTEIHSLEQDLPKRVCARLAIPTQEGIMSGDEPQAAKRPRLPAPQAPPQSLMDSTQ
QHLGRHPPATAPAPHSITPTTPSHVPAPPNTDISAPTLTQALAISIPEPTLNPMPALPDP
CLADHLPAAPLLPLSPDMPSQHQGEVYTPSSSYVSYMETLLNAHFPPQEKGPGPLF
NT seq 3591 nt   +upstreamnt  +downstreamnt
atgtcattgacagcgcccccagatccaactgccaccatgtcgctggaagcgtcaacccca
gcgccagacctagccccagcgccagacctagccccagcaccagacctagccccagcacca
gacctagccccagcaccagacctggtcccagatccagccccagacctagctcctgaatta
accccagattcagctcaagccccagagctagcctcagatccagcccctaccccagctcct
ccagtcccagtcatgaacccggggtgtaagatcatgaccttccggccaaccatggaggaa
ttcaaggactttgccaaatacgttgcctacatggagactcaaggagcacaccgtgcaggc
ctggcaaaggtgattcctcctaagggctggaagccgcggcagtcatacgacaccatcgag
gagatggtgatccctgctcccatcatgcaggtggtgacgggccagtcgggcctcttcacc
cagtacaacatccagaagaagtccatgaccgtcggggagtaccgtcaactggccaacagc
agaacgtactgtactccccgacacaaggacttcgacgacctggagaggaaatactggaag
aacctcacctttgtttcgcctatctacggcgccgacgtcagcggctccatctacgacccg
gagatcggtgagtggaacatcggccacctgaacacgctgctggacatggtggagcaggag
tgtggcatcgtgatcgagggggtgaacacgccctacctgtactttggcatgtggaagacc
accttcgcctggcacacagaggacatggatctctacagtatcaactacctccactttgga
gagcccaagtcatggtacgccgtcccacctgagcacggcaagaggctggagagactggcg
caaggtttcttcccaggcagttcccagggctgtgacgccttcctccgccacaagatgact
ctcatctccccatccatattgaagaagtacagcatccccttcgacaggatcactcaggaa
gaaggcgagttcatggtcacctttccctacggctaccacgccggtttcaaccacggcttc
aactgcgccgagtccaccaactttgccaccctgcgctggatcgactacggcaagatggca
acgcagtgtacgtgtcgtaaggacatggtgaagatctccatggacgtgttcgtacgctgc
ctgcagcccgagcgctatgagcagtggaaacagggcaaggacggcaccgtgctggaccac
cagcgacccaccaccctcaacagccccgagctggagcactggagggccaaccgggtcacc
taccgggagaagctgctccagagagctttgcagaagaaggagcagctgcgccggctgaag
ctggaggaggtcaaggtgctggcggaagagggcatcgagctggacgccgtggcctaccag
cggcaggtggaggagcgcgaggcccagcggcggcaggacagggaggagaggatggcccgc
gaggccctggagaccctggaggccatggatagagaggaccgggagaggcaggaagccctt
gccgcccaggccgcaagaggcctaccagacccccaggtagacccgcggcacttgacggcg
aatggcgagaagaagaagaagaagaagaagaagaagaaacaacccgccctgccgtccgac
cccatgaactctttccaagcagcttttgagaagtttgccacgtttaaaatcccgcagatc
ccaaagcagcccaaaggcagcaatgacacagacctaccagcagagggcaagcttgatgtg
aacggtatgcagcagtcatcgtcttactccaagcagctgaagatgaggatggaggtgaaa
aagagtcgccggcaccccctcagcaaaccccccatgcgatccccactctccatcgtcaag
caggagacatctagtgacgaagaacttttctccccctggccactggatggcgacgtgaag
aaggcaggccacttgtggcagaaccgcacgcccaacttcctggccgagaagggtttcaac
gcggccgtggccaccctggaaccctactgtgccgtatgcactctgttctgtccgtacaca
cagaaggactcctcctacccgaccgacagtcccggtgcccccaaccaccacagcgtatcc
cgctgtggcagccgtacccatccgctggtccccgagatgtgcttcagcgccggggcaggc
aataccgagccgccgccctccaactctcacacgggtgacgacggcaccagcccgctgctc
tcctgctcctcctgcagcctgcaggtccactccagttgttatggtgttaggccggacacg
gtacacaatggggcctggaagtgtttgagatgtacagcgctcgcctggacagcggactgc
tgtctgtgtaacttacggggaggcgctttgaagatgaccacggacaaccggtgggtccat
gtgatctgtgccatcgctgtggccgaggcccgcttcgtcaacgccgtcgagagggagccg
gtggacatcagcgccatcccagagaacaggaagagtctgaagtgtgtgtactgccataaa
aacaccaagcagatgtgtggcgcgtgtatccagtgttcccacgacagctgctccacctcc
tttcatgtcacctgcgctcacatcgccggcgtgctcatgaagcccgccgattggccctac
gtggtgtccgtcacgtgccacaagcacaagaagaccaatcacaaggcgagggcggggcca
aggggggagttttctctgggccagaaggtgattggtcggaacagcgacggctggttctac
ccctgcaccatcatcggaatgtcgtcgcacaccttctacgaggtcaactatgatgacggc
tcctactgcgacaacttattcccagagaacattgtgagtcatgactgtcttcgtaacggc
ccgccagagatgggcgagctgatgttggtccacaccgcggagggcaaggcgctcaacgcc
tcctacgtcagggaccacgtccacaagcactaccaggtggagttccaggatgagtcacag
ttgttactgaagcaaacagagatccactcgctggagcaggacctgcccaaaagggtctgc
gcccgcctggcaataccaacccaggaaggtattatgtcaggagatgaaccacaggcagcc
aagcggcctcgcctccccgctcctcaagccccacctcaatccctcatggactcaacgcag
cagcacctcggacgccaccccccagctacagccccagcacctcacagtattacacccacc
acccccagccatgtgcctgctccccccaacactgacatcagtgcccctaccctcacacag
gctctggcaatatccatccctgagcccacccttaacccaatgcccgctctccctgacccc
tgtctcgctgaccatctcccagccgcccccctgctgcccctgtccccagacatgccctcc
cagcaccagggcgaagtctacacacctagctccagctacgtatcctacatggagactctg
ctcaatgcacatttcccccctcaggaaaagggccccggtcccctgttttaa

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