Oncorhynchus nerka (sockeye salmon): 115108075
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Entry
115108075 CDS
T07952
Name
(RefSeq) zinc finger CCCH domain-containing protein 13-like isoform X1
KO
K25949
coiled-coil domain-containing protein 50
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108075
Membrane trafficking [BR:
one04131
]
Autophagy
Other autophagy associated proteins
Others
115108075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CCDC50_N
Motif
Other DBs
NCBI-GeneID:
115108075
NCBI-ProteinID:
XP_029487877
LinkDB
All DBs
Position
LG24:33779507..33811708
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AA seq
663 aa
AA seq
DB search
MAEFPIDQNKLPGVKEVCRDFAVLEDHCLAHNLQEQEIESHLASNVHKSRLVQQDVALAK
QLQEEEDRRAQAKAKRQHRDIERSDNEIAQEIQEELVRQAEQQRKQEEKDAAIARKLQEK
EMKEERKRQKQLEANFEEEYYEDKGASRAPLDLDDKPRRPGSNSHSPESHPLTPGSRRDL
SPEYVSFEPSRTRYPPYDSVEPSTSGRSRSPEHHLESRGGGSRVKHGDPYPEDHLSNSRG
KRGGSYPDYHHPTEGRSKGKGDQRGRDPQGSQSTFYPDSREPRRHREERGDEGERVVRRK
ERPSRPPPQSHNPVERDEAWERKRECEKDRQREPRRDEERERDTPRHEERSRGGQRHGLR
SQDQEHGRDKHREKDRRRERTKSRERGLDEDYYEPIPSSRAWTVGGVEGPVDEGGPMARL
HSGPSELCEEEEARRSPRPGVMRGERRGHRDPGEGPSMGTERSYTHPAPREPGRIVQGGP
GGRGAVVVGGEYGMGEATQGIAQLDLREQEILDMEVARKLQEEEVKASKMDKRAAQVAQD
EEIARLLMEQEKKEYKKSREKEKQGMRPEERGMRPEERGMRLEERRRPEGGDCKPNSEEV
VRPRSREEEYQRHRNHQKPARPPQPLPHDYENVETSYSYSESHYSSRTPARPEAAYKGTY
YRQ
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggctgagtttcccatcgatcaaaacaaactgcctggagtaaaagaagtgtgtcgagac
tttgctgtgctggaggaccactgcctggcccataatctccaggagcaggaaatcgagagc
cacttggcatccaacgtccacaagagccgtctggtgcagcaggacgtagcgttggccaag
cagctgcaggaggaggaggaccggagggcccaggccaaggccaagagacaacaccgggac
atagagcgcagcgacaatgagattgcccaggagatacaggaggaattggttcgacaggcg
gagcagcagcgcaagcaggaggagaaggatgcggccatcgctcgtaagctgcaggagaag
gagatgaaggaggagaggaagcgacagaagcagctggaggccaactttgaggaggagtac
tacgaggataaaggagcctcccgagcccctctggacctggatgacaaacccaggcgacct
ggttcaaactcccactcccccgagtcgcatccccttaccccaggttcacgacgcgacctc
tcccccgagtatgtttcttttgagcctagcaggaccagataccccccatacgactctgtg
gagcctagcaccagtggacgttccaggtcccccgagcaccatttagagagtagaggaggg
ggtagtagggtcaagcatggagacccataccccgaggaccacctctccaatagcaggggg
aaacgtgggggcagttacccagactaccaccaccccaccgagggtagaagtaaagggaag
ggggaccagaggggccgagacccccaggggtcccagtccaccttctacccagacagccgt
gagcccaggagacacagagaggagagaggggatgagggagagcgggtggtgaggaggaag
gagaggcccagtcggccgcccccgcagtcccacaaccctgtggagagagacgaggcttgg
gagagaaaaagagagtgtgagaaagaccggcaaagagaacccaggagagacgaggagagg
gagagagacacaccaagacacgaggagagatcgcgaggcggacagagacatgggctgcga
tcgcaagaccaagagcatggccgagacaaacacagagaaaaagacagacgccgagagaga
accaagagcagggagcgaggtcttgatgaagactattacgagcccatacccagcagccgg
gcctggactgttggtggggtggagggccctgtggatgagggggggcccatggccaggctc
cactctggccccagtgagctgtgtgaggaggaggaggccagaaggagcccccgccccggc
gtgatgaggggggagaggagaggtcacagggaccctggggaggggcccagcatgggcacg
gagcgctcctacacgcaccccgctcccagggagccaggtcgtatcgtgcaagggggacca
gggggtcgcggcgcagtggtggtaggaggggagtacgggatgggcgaggccacccagggc
atcgcccagctggacctgagggagcaggagatcctggacatggaggtggcccggaaacta
caggaggaagaggtcaaggcgagcaagatggacaagcgcgcagcccaagtggctcaggat
gaggagatagcccggctgctgatggagcaggagaagaaagagtacaagaagtccagggag
aaggagaagcaggggatgaggccggaagagagggggatgagaccggaagagagggggatg
aggctggaagagaggaggcggccagagggaggagactgcaagcccaactcagaggaggta
gtgcgtcccaggtcccgagaggaggagtatcagaggcacaggaaccaccaaaagcctgcc
agacctcctcaacctcttccacatgactatgagaatgtggagaccagctacagctactca
gagagccactactcttcccgcactccagccagacctgaggctgcttacaaaggtacctat
tacaggcagtga
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