Oncorhynchus nerka (sockeye salmon): 115108117
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Entry
115108117 CDS
T07952
Symbol
nfia
Name
(RefSeq) nuclear factor 1 A-type isoform X1
KO
K09168
nuclear factor I/A
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115108117 (nfia)
Transcription factors [BR:
one03000
]
Eukaryotic type
Other basic domains
NF-1
115108117 (nfia)
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Gene cluster
GFIT
Motif
Pfam:
CTF_NFI
NfI_DNAbd_pre-N
MH1
Motif
Other DBs
NCBI-GeneID:
115108117
NCBI-ProteinID:
XP_029487957
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Position
LG24:complement(35397500..35578385)
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AA seq
570 aa
AA seq
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MKLADSVMAGKTTEGSIKWQLCYDISARTWWMDEFHPFIEALLPHVRAFAYTWFNLQARK
RKYFKKHEKRMSKEEERAVKDELLSEKPEVKQKWASRLLAKLRKDIRPEFREDFVLTVTG
KKPPCCVLSNPDQKGKMRRIDCLRQADKVWRLDLVMVILFKGIPLESTDGERLVKSPQCS
NPGLCVQPHHIGVSVKELDLYLAYFVHADGQSDSPNQQSESDIKDQPENGHLGFQDSFVT
SGVFSVAELVRVSQTPIAAGTGPNFSLADLDSSSYYSMSPGAMRRPLPSTSSSSSAKRIK
CMEDEVDSPGEESYYPGQGRSPGSGSQASSWHEVEPAGYKLRGSLASSFISRQGMPSPTT
LKKSEKCGFSSPVVPSQTTSSPRTAFTHHHRPVITGPRASPHATPSSLHFPTSPIIQQPG
SYFSHPAIRYHPQESLKEFVQLVCPDSGQQGGQVGFLNKYAEIPWGKYCTSGRRESTAVE
PNGSSQGKVHNPFLPTPMLPPPPPPPMARPVPLPVPDSKPPSTSTEGGGNSPTSPTYSTP
STSPAQRFVSVGPRDPSFVNIPQQPQWYLG
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttgctgacagcgtaatggcaggcaaaaccacggaaggctccatcaaatggcag
ctctgctacgacatctcagccaggacttggtggatggatgaattccatcctttcatcgaa
gctctgctgccccacgtgcgagcgtttgcctacacatggttcaacctgcaggcccgcaag
agaaagtacttcaagaagcacgagaagcgcatgtctaaggaagaggagcgcgcagtgaag
gacgagctgctcagcgagaagcccgaggtcaagcagaagtgggcatcgcgccttctggcc
aagctccgcaaggacatccggcctgagttccgggaggattttgtgctcaccgtcaccggg
aagaagcccccgtgctgcgtgctgtccaaccctgaccagaagggtaagatgaggaggatc
gactgcctgcgtcaggcagacaaagtctggaggttggacctggtcatggtcattttattc
aaaggtattcccctcgaaagtactgatggcgaaaggctggtaaagtccccacagtgctcg
aacccagggctgtgtgtgcagcctcatcacattggagtttctgtgaaggagctcgacctc
tacttggcctactttgtgcacgcagatggccagtcagacagtcccaaccagcagagtgag
tctgacatcaaggaccagcctgagaacggacatcttggcttccaggacagcttcgtcaca
tcgggggtcttcagtgttgctgaactcgtgcgagtctcacagaccccaatcgcagcgggg
acgggtcctaacttctcgctggcggacttggacagctcctcctactacagcatgagcccc
ggggccatgaggcgacccttaccaagcacctcctccagcagctcggccaagaggatcaag
tgtatggaggatgaggtggacagtccaggagaggagtcctactacccgggccagggtcgc
tccccgggcagcggcagccaggccagcagctggcacgaagtggaaccagctggatataaa
ctgcgtggctcgctagctagttcgttcatctcaagacaagggatgccatcgcccaccaca
ttaaagaagtcagagaagtgtggtttcagcagccctgtcgtgccttcgcagaccacctcc
tccccccgaacggcattcacacaccatcatcggcctgtcattacaggacctagagcgagt
ccccacgccacgccgtcgagcctccacttccccacgtcgcccatcatccagcagcccggc
tcctacttctcccacccggccatccgttaccacccccaggagagcctcaaggagtttgtc
caacttgtctgccccgactctggccagcagggaggacaggtgggcttccttaacaagtat
gcagaaataccatgggggaaatactgtacaagtggtcgaagagagagcactgcagtggag
cccaacggaagcagtcaggggaaggtccacaacccattcctgcccacccccatgctgccc
cctccacccccgccccctatggcgcggcccgtacccctgcctgtgccagactccaaacca
ccatccacctccaccgagggagggggtaactcccccacctcgccaacctactccacaccg
agcacgtccccagcccagcgcttcgtcagtgtgggcccccgagaccccagctttgtaaat
atccctcagcagccccagtggtacctgggataa
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