Oncorhynchus nerka (sockeye salmon): 115108149
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Entry
115108149 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: small glutamine-rich tetratricopeptide repeat-containing protein alpha-like
KO
K16365
small glutamine-rich tetratricopeptide repeat-containing protein alpha
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03060
Protein export
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
115108149
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03110 Chaperones and folding catalysts [BR:
one03110
]
115108149
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
one04147
]
115108149
Chaperones and folding catalysts [BR:
one03110
]
Other chaperones and cochaperones
Others
115108149
Exosome [BR:
one04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
115108149
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
SGTA_dimer
TPR_8
TPR_2
TPR_17
TPR_11
TPR_16
TPR_12
TPR_14
TPR_19
TPR_10
TPR_7
TPR_9
Fis1_TPR_C
TOM20_plant
TPR_6
BTAD
Motif
Other DBs
NCBI-GeneID:
115108149
NCBI-ProteinID:
XP_029488032
EnsemblRapid:
ENSONEG00000007499
LinkDB
All DBs
Position
LG24:complement(36843592..36848072)
Genome browser
AA seq
342 aa
AA seq
DB search
MTDTKRLAFSIIHFLHDQLGSGSLSSDAQESLEVAVQCLETAFNVSTDDQTLAVTQTLPE
IFASATLKHPNTLHVNINTATDSPTEEEEAEAERLKTDGNDQMRVENYGAAVEFYSKAIA
INPQNGVYYCNRAAAYSKLGNYAGAVQDCELAIGIDPNYSKAYGRMGLALASLNKHTEAV
SYYKKALELDPENDTYKSNLKIAEQKMETPSPTGGVGGVDLAGLLSNPGFMNMASGLMNN
PQVQQLMSGMMSGAYGPMGPPAASGVGPGLGAGPGPVPGLGLGAGPAAGVGVGGAGPGDI
SGLIQAGQQFAQQMQQQNPELIEQLRSQIRSRPSSASNDEQP
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgactgacacaaagcgtcttgccttctccatcattcactttcttcatgatcaactgggc
tctgggagtctatcatcagatgctcaggaaagtttagaagttgcagtccaatgcctggag
accgccttcaatgtctcgaccgacgaccagaccctagctgtcactcaaacgctaccagag
atttttgcctctgcgacactgaagcatccaaacaccctccacgtgaatataaacacagcc
acagattcccccactgaggaggaagaggcagaggctgagcgactcaaaactgatgggaat
gatcaaatgagggttgagaactatggggcagctgtggaattctactcaaaggctattgcc
ataaatccccagaatggagtttactactgcaacagggctgctgcatacagcaaactaggc
aactacgctggagcagtgcaggactgtgaacttgccattggcattgacccaaactacagc
aaagcgtatggaagaatgggtttggctctagccagtttaaacaaacacacagaagctgta
agttattacaaaaaagccctggagttggacccagagaacgacacctacaaatccaacctg
aaaatagcagagcagaaaatggagactccaagcccaacagggggagtgggaggagttgat
ctggctgggttgctcagtaaccctggtttcatgaacatggcatctggtttgatgaacaac
ccacaagtacagcaactgatgtcggggatgatgtcaggggcttacgggccaatgggacct
ccagcagcgtctggagtagggcctggcttaggtgcaggaccagggcctgtaccagggtta
gggttgggagccggaccggcagcaggagttggagtagggggagcgggtccgggtgacatc
tctggtctcatccaagcgggccaacaatttgcgcagcagatgcaacagcagaacccagag
ttaattgaacagctgaggagtcaaattcgcagccggccgtctagcgctagcaacgatgag
caaccttga
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