Oncorhynchus nerka (sockeye salmon): 115108160
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Entry
115108160 CDS
T07952
Name
(RefSeq) microtubule-associated protein 1S-like isoform X1
KO
K10429
microtubule-associated protein 1
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115108160
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
one01009
]
115108160
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115108160
Protein phosphatases and associated proteins [BR:
one01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115108160
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule-associated proteins (MAPs)
115108160
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MAPB1_N
Motif
Other DBs
NCBI-GeneID:
115108160
NCBI-ProteinID:
XP_029488050
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Position
LG24:37219837..37264970
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AA seq
1432 aa
AA seq
DB search
MATQQTEAIEAMENANRTSHPGFSNDKYSLLVIVGGHSRTGFVDYVVAEIKRGIRSWDVD
LTFCNLDEQLKLFVSRHSAFFSEEIKGQRTLQHSGDVLDTKVVGNPSHELVCSEVRRLIS
DVSRHKLLVLAGQCVEEAGDLVLQTGCFSLSDFIQIFADEEIGELLSSADPTQKASLTLS
CPNTGVWKNSVLEKHNLQDFIDIKTNLPSVLPEMEGLQEFTEYLSESLEPQSSFELLEPP
STVGFLKLSRPCCYVFPGGRGDSAFFAVNGFNILVNGGSDPRSCFWKLVRHLDRVDCLLL
THIGTDNLPGVNSLLQRKVVELEDEQSADSQINEDWMKNLISPDIGIVFLNAPERLKSFE
GDPKELRSCDQVALTLQHLDRLTINPEPLSRSNGPTIEPVILFQKMGVGRLELYVLNPVK
GSKELEALMKNWPGNGSNMKGSEIPLPCLVSICALLVWHPASTHEKIIRVLFPGCTPQAK
ILEGLDKVKHLEFLKHPAVSLRDLEASKSDKQPKRAESRESLKSLPKDSRPSSALLKDKL
GRGDLRKQDVKTKPKGPSDIAPKEKEGDEKLKLKDVDAKQRLPKPEKLMTKKEPLKDEKK
EVKKRDDKASAVVAKKDENVEKKREPIKKEPLGLKPKKDIKPDPKKEIKKEIKPDEKKPT
KPVSKDVKKVTAGPSLGNAEAKKNVGKNGTLKDAIPKKDSLNKGGKSKTSKKTENQKASA
SEGDADRSKMSTPEDMTVEFEKLRAENGESEKKTAVVASTIANNEGMAQPETENGSRENA
EKGNILESPEKFRCMETLPNPEKSLGTTSPLAKTPKSDRSVNFDITPTEYRLLDGALRNG
QDACASSDEKTLELVSPADSAPNSAGHTPFHQSPEEDAQGSGEDSSLGGRVPSLGFEDCH
VMGSCRNSEVGSLKGNLENSTSSQEKQSSLLTLSPFMLPDSVSPNITSMPAEIGSPHSTE
VDESLSVSFEQVLPSIDESPKGDHMDRSYSNGHFADPDPKMGMSLPLRTCHNMRPPGDGS
EERLTGFQGLLPDVPHDVDLCLVSPCEFKHPKSPENQQQHLSPGLATGSPRELSENSNHS
QDLAKPQSVIHSDRHSPQGQETPPTSASESLNTATDSDIPPGTEDCPSITADMDSDEDSG
SFPPHHPHDHPSSHSSNRGAQHSSQDPPPAPMKDLPPLPPQPGACMADPEADAPSKTSKS
SATKTKKPAGVTHRLTSATSTTLNSKTKTGSTTGTLKITSSLDTRPSSRNITNGSRPGTT
RSTFSGSVGSKASAAGGAPVYLDLAYLPSGCASTTIDVEFFRRLRSSCYIVSGNEHLKES
VMRPILDALLDGKTAWPDVQVTLSPLLLFLIFHICSTLSKVLSTSMCTCSHFYLPIYLST
QVTLIPTFDSLTMHEWYQETHERQGELGITVLGSNSTVAMQEETFPACKVEF
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggcgacacaacaaacggaagcgatcgaagcaatggaaaatgcgaaccgaacttcgcat
cctggcttcagtaacgacaagtattctctgctcgtcattgtcggtggacatagtcggact
ggatttgtggactacgtggtggcagagataaagagaggcatccgctcatgggatgtggac
ctgacattctgtaacctggacgagcagctcaagctctttgtgtctcgacactctgccttc
ttctcggaagaaataaaaggccagaggacactgcagcacagtggagacgttctagacacc
aaggtggtggggaacccatcccatgagttggtctgctcagaggtgcgccggcttatatct
gacgtgtctcgccacaagttgttggttcttgctggacaatgtgtcgaagaggcaggagac
ctggtcttacaaacaggatgtttctctctcagtgacttcattcagatatttgctgatgaa
gagattggagagttattgagctcggcagaccctacacaaaaagctagcctcacactgagt
tgtcctaacactggagtgtggaagaactccgtgttggagaaacacaacctacaagacttc
attgacatcaaaacaaacctgccatcagtgctacctgaaatggaaggtctgcaagagttc
acagaatatctctccgagtccctggagccacagtcttcttttgagctgctggagcccccc
agtactgtgggcttcctcaaactctctcgcccctgctgttacgtatttccaggtgggaga
ggagactctgccttctttgctgttaacggtttcaacatcctggtcaacggtgggtccgat
ccacgctcctgtttctggaaactggttagacatctggacagagttgactgcctgctcctc
acccacatcggtactgacaatcttccaggggtgaacagtcttctccaaaggaaagtggta
gaactggaggatgaacaatctgccgactctcagatcaatgaggactggatgaaaaatcta
atttctcctgatattggcatagtttttcttaatgctccagagagattaaagtcattcgag
ggtgatcccaaagaactgcggagctgcgatcaggtggcactcacgttgcagcatcttgac
aggctaacaatcaatccagagcctcttagtcgctcaaatggacccaccattgagcctgtt
atacttttccagaagatgggagtcggtcgtctagagctgtatgttcttaacccagtcaaa
ggcagtaaagagcttgaggctttgatgaagaactggcccggcaatggatccaacatgaaa
ggctcagagatacccctgccttgccttgtctccatctgtgctctattggtgtggcatcct
gccagtactcatgagaagatcattcgagttctcttccctgggtgtactccgcaggccaag
attcttgaaggacttgacaaagtaaagcatctagaattcctgaaacaccccgccgtgagc
cttagggaccttgaagcatccaaatcagataaacaaccaaaacgtgcagagagtcgggag
agccttaagtcccttcccaaggactccagacctagcagtgccttgctgaaggacaaactt
ggacgtggggaccttaggaaacaagacgtgaagaccaagcccaaaggcccaagtgacatt
gctcctaaagaaaaggaaggggatgagaagttgaaattgaaggatgtggatgctaaacaa
agacttccaaagcccgaaaagcttatgacaaagaaggaacctttaaaggatgagaaaaaa
gaagtcaaaaagagggatgataaagcctctgcagttgttgccaaaaaggatgagaatgtg
gagaaaaagagagaaccaattaagaaagaacctcttggtctaaaaccaaagaaagacatc
aaacctgatccaaagaaagagatcaagaaggaaatcaagccagatgagaagaaaccaaca
aaacctgtcagcaaggatgtcaaaaaagtgacagctggaccttcattaggaaacgcagaa
gcaaaaaaaaatgtaggcaagaatggaactttgaaggatgcaatccccaagaaagactca
ttgaacaaggggggaaagtcaaagacgagtaaaaagacagagaatcaaaaagcttcagcc
tctgaaggggatgcggatcgttctaagatgtcaacgcctgaagacatgacagtggaattc
gagaagctcagagcagaaaatggagagtcagagaaaaagactgctgttgtagcgagcact
atagctaacaatgaaggaatggcgcaacctgaaacagagaatggatcaagagaaaatgca
gagaagggtaacatcttggaaagtccagaaaagttccgctgcatggagacactcccaaat
ccagagaagtccctgggaaccacttcacctcttgccaaaactcctaaaagtgaccgcagt
gtgaactttgatattacaccaactgaatacagacttcttgatggggccctgcgaaatgga
caagatgcatgtgccagctcagatgagaagactttagagttggtctcccctgctgactca
gcccctaatagcgctgggcatacccctttccaccaatcacctgaagaggatgctcagggc
tctggtgaggacagtagtctcgggggaagggtgcctagccttggctttgaagactgccat
gtcatgggttcttgcaggaactctgaggtaggctccttgaaggggaacctagagaactct
acatcgtcccaggagaagcaatcaagccttttgacactgagtcccttcatgctgccggac
tctgtctcccccaatattacctctatgcctgctgaaatcggttccccacactcgacagaa
gttgatgagtctctttccgtgtcttttgaacaggtgctcccatctattgatgagtcaccc
aagggagaccatatggacaggtcctactctaatgggcattttgctgatcctgaccccaaa
atggggatgtccttacctttgaggacatgtcataacatgcgtccgccaggggacggctca
gaggaacgccttactggatttcagggtcttctccctgacgttccccatgacgtcgacctc
tgcctggtctcaccttgtgaattcaagcatccgaaatccccagagaaccaacaacagcat
ctgtctccggggctagcgaccggtagcccgcgagaactatcagaaaacagcaaccactcc
caggacctagctaagccacaaagcgtcattcatagtgatcgacattcgccacaaggtcag
gagactccacccacatctgctagtgagtccctcaacacagccacagattcagacataccc
ccagggactgaagactgcccctccatcactgcggacatggactctgatgaggattctggg
agtttcccaccccaccatccacacgaccatcccagctctcactcctccaacaggggagct
caacattcctctcaggaccctcccccagccccaatgaaggacctgccacccttgccgccc
cagcccggtgcctgcatggctgaccctgaggctgatgctccaagcaagacctcaaagagc
agtgccacaaaaaccaagaaaccagctggggtcacacacaggttaacgtcagccaccagt
acaactctgaacagcaagaccaagactggcagcacaactggtacgttgaaaatcacctca
agtcttgacacaaggccttcatcccgcaatatcactaatggctccagacctgggactaca
aggtcaactttttcaggttctgtgggcagcaaggccagtgcagctggaggggccccagtt
tatttggacctggcttatctcccatctggttgtgcctctaccaccattgacgtggagttc
ttccgacgcctgcgctcctcctgctacattgtcagtggcaatgaacacctgaaggagtct
gtcatgagacctatacttgatgccctactggacgggaagacagcctggcccgatgtgcag
gtcaccctctctccccttctcttatttctcattttccatatttgtagtacgttgtcaaaa
gtcttgtctacttctatgtgcacatgctctcatttttatttacccatctacctttctact
caggtgaccctgatccccacttttgactcactgacgatgcatgagtggtaccaggagacc
cacgagaggcagggggagctgggcattaccgtgctgggcagcaacagcactgtggccatg
caagaggagaccttccctgcctgtaaagtggagttctga
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integrated database retrieval system
