Oncorhynchus nerka (sockeye salmon): 115108167
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Entry
115108167 CDS
T07952
Name
(RefSeq) PWWP domain-containing DNA repair factor 3A-like isoform X1
KO
K23386
PWWP domain-containing DNA repair factor 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
one03400
]
115108167
DNA repair and recombination proteins [BR:
one03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Other NHEJ factors
115108167
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PWP3A-B_C
MUM1-like_PWWP
PWP3A-B_N
PWWP
Rad9_Rad53_bind
Motif
Other DBs
NCBI-GeneID:
115108167
NCBI-ProteinID:
XP_029488069
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All DBs
Position
LG24:complement(37672659..37682261)
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AA seq
538 aa
AA seq
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MEASEYLLCKWKGHHWPAKVLRRVCNSKRKNDMEVEMLGEGHRGVCILFCRVWVQQKETQ
ALTQECIESISGHLSDHASKRRDPIRELKYRRALRLALDMFPSGETSSTLVLGDPRTSEK
RRDQQLPSAPEEQETRARRVIRANEPQSEENNDCASQKTSPGAAQENVTVHSVADVSSDL
SLTPPSSSPLQPLQVSFDEQEDSSLEDEEEDDDLPSFTSPKKTLSITKGACVWCKYRRCP
FWPAMIMYVSRKEKKASVVFIDTFLFTQKRKSVKVSLKNIKPFDCEESNELVDKAKEIYG
TAIHYCLKLIGDYRIRLGCGSFSGSLVEYVADDISIPMRKLYLLGPSDSYLASPSQDVED
QRNYQGTPEDHATTKGSEQEPQVSKRLLPDRAKAARDRANDKLLQFIVDKRGVERHLQAI
ISGQVVSKWLKAFRKASGKAVDPYFETDQQVEQVFTYLRSIMEEALPSLPELDQIRFILE
VLLPEAVIHGISEVDDISLVKAEEKYSQGPGISNREREEFDLMIVQQMKKKHCRNDKE
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atggaagcatctgaatatctcctatgcaagtggaaaggccaccactggccagctaaggtt
ttgagaagagtgtgcaattccaagaggaagaatgatatggaagtggaaatgttgggagaa
ggtcacagaggagtgtgtattttgttttgcagagtgtgggtgcagcagaaggaaacgcaa
gccctgacccaagaatgcatcgagagcatctctggacatctgagtgatcatgcttccaaa
aggagggacccaataagagaattgaaataccggagagcactgcgcttggcattggatatg
ttcccctcaggagagacaagcagcactctggtgttaggagaccccagaacatccgaaaag
agaagagaccaacagttgccatcggcgcctgaagagcaagaaacgagagcaagacgcgtc
atccgagcaaatgagcctcagtctgaggaaaacaacgattgtgcctctcaaaaaacaagt
ccgggtgcagctcaagagaatgtcactgttcacagtgtggccgatgtgtcaagtgatttg
agccttactccaccttcttcatccccactgcaaccgctccaagtgtccttcgacgaacag
gaggacagtagtctggaggatgaggaggaggatgatgacctacccagtttcacttcacca
aagaaaaccctatccatcacaaagggagcttgtgtctggtgtaaatatcgacgttgcccc
ttctggcctgctatgatcatgtatgtgtcccgcaaagagaagaaagccagcgtcgtgttc
atcgacacatttcttttcacacagaagaggaagagcgtcaaggtctccttaaagaatatc
aagccctttgactgtgaggagtcaaatgagttggtggacaaagccaaggagatatatggt
actgccatccactattgcctgaagcttattggggactatagaattcgccttggttgtggt
tcattttccggttccctcgttgagtatgttgctgatgacatcagcatccctatgagaaag
ctgtaccttctcggcccatctgacagttatctggcctcgccaagtcaagacgtggaggac
cagagaaattaccaggggactccggaagaccatgcgaccaccaagggcagtgaacaggag
ccacaggtctccaagagactgctacctgaccgcgccaaggctgcacgggaccgggccaat
gacaaactactgcagttcatcgtcgataaaagaggcgtggaaaggcacttgcaggctatt
atcagcggtcaggtggtgtccaagtggctgaaagccttccgcaaggccagtggtaaagca
gtggacccctactttgagacggaccagcaggtggagcaggttttcacttatctcaggagc
atcatggaggaagccttgccaagtctgccagagttagatcagatccgcttcatcctcgaa
gtgctcttaccagaggctgtcattcatggaatctcggaggtcgatgacatatccctggtt
aaggctgaagagaaatactcacaagggcctggcatcagtaatagagagcgagaggagttt
gaccttatgattgtgcagcagatgaagaaaaagcactgcagaaacgataaagaataa
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