Oncorhynchus nerka (sockeye salmon): 115108208
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Entry
115108208 CDS
T07952
Symbol
lsg1
Name
(RefSeq) large subunit GTPase 1 homolog
KO
K14539
large subunit GTPase 1 [EC:3.6.1.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
one00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
115108208 (lsg1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
one03009
]
115108208 (lsg1)
Ribosome biogenesis [BR:
one03009
]
Eukaryotic type
Pre-60S particles
GTPases
115108208 (lsg1)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MMR_HSR1
FeoB_N
RsgA_GTPase
AIG1
Motif
Other DBs
NCBI-GeneID:
115108208
NCBI-ProteinID:
XP_029488137
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Position
LG24:complement(38863457..38870513)
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AA seq
652 aa
AA seq
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MGKKKSAMGLGRSLIKERLNAGRGNKRGDTWLHTSELNDGYDWGRLNLQSVTEQSSMDDF
LATAEMAGTEFVAEKLNIKFVAAEARAGLLTAEETAKLKKLHEENKQLLRIPRRPHWDEG
TSPEVLQQTERDSFLEWRRELAELEEEQKMILTPFERNLDFWRQLWRVIERSDIVVQIVD
ARNPLLFRCPDLECYVKEVSRYKVNLLLVNKADLLTRQQRRIWARYFQREGLRAVFWSAL
VENERLEAEEKGMEVEEQEDEKSEAEDEDEGMPDNDNMSRRQEVEDNKEKNEKESEEEED
ESDMEGEQFKDCVAEGDWQTASEGEEASEDEEADDEESIDGSTHGSSFHNSSRLLTKDEL
LAIFKAAHDGPTLKEGELTVGLVGYPNVGKSSTINTILRNKKVSVSVTPGHTKHFQTLYV
EPGLCLCDCPGLVMPSFVSTKAEMMCCGILPIDQIRDHVPAISLVCQTIPRDVLEGTYGI
NIIRPREDEDPDRIPNYEELLMAYGYMRGFMTTHGQPDQSRSARYILKDYVIGKLLYCHP
PPHISAADFQPQHSKFQAGDADGEDSKIGNKPSKVKRHENLVDKNFFHQENVRALTKGVQ
SFMGYKEGSVGQRELVNQGKPGLEQPVGKPWKKHGNRNKKEKVRRLTKHLDA
NT seq
1959 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagaaaaagtctgccatggggctcgggagatcactgataaaggagagactcaac
gcaggccgaggcaacaagaggggcgatacttggctccacaccagtgaactgaacgatggc
tacgactggggtcgtctcaacctgcagtcagtgactgaacagagctctatggatgacttc
cttgcaactgctgaaatggccgggacagagtttgttgcagaaaagctcaacatcaagttt
gtggcagctgaagctcgggcaggattactgacagccgaggagacggcaaagctgaagaag
ctgcacgaggagaacaaacaactcctcagaattccacgaaggcctcactgggatgaaggc
accagtccagaggtcctccagcagacagagagagacagcttcctggagtggagaagagaa
ctggcagagcttgaagaggagcagaaaatgattctcacaccttttgagaggaatttggat
ttctggagacagctctggagagtgattgagaggagtgacattgttgttcagattgtggat
gccagaaacccattgctatttcgttgccctgacctggagtgctatgtaaaagaggtgtcc
cggtacaaggtgaacttgttgctggtgaacaaggctgacctgctgacccggcagcagcgg
aggatctgggccagatacttccagagagagggcctccgcgctgtgttctggtccgcactg
gtggagaacgagaggctggaggcagaggagaagggaatggaagtggaggagcaggaggat
gaaaagagcgaagcggaggatgaagacgagggaatgccagacaacgacaatatgagccga
agacaggaggtagaggataacaaggagaagaatgagaaagagagcgaggaggaagaagat
gagagcgatatggaaggggagcagtttaaagactgcgtagcagagggagactggcagacg
gcatcggagggtgaagaggcatcagaggatgaggaggcagacgacgaagagagtatagat
ggctccacccacggctcctccttccacaactccagtcgcctgctgacaaaagatgagctg
cttgccatatttaaggcggctcacgatgggccaacgttgaaagagggcgagctcacagtg
gggctggtggggtatcccaatgtgggtaaaagttctaccatcaacaccattctgagaaat
aagaaggtgtccgtctcagtcacgcctgggcacaccaagcactttcagacgctgtatgtg
gagccaggtctgtgtctgtgtgactgccctggcctggtcatgccctcctttgtgtccact
aaagctgagatgatgtgctgtgggatcctgcccatcgaccagatacgagaccatgtgcct
gccatctctctcgtgtgtcagacaattcctcgggatgtgctggagggcacctatggcatc
aacatcatccgcccgcgagaggacgaggaccccgaccgcatccccaactatgaggagcta
ctgatggcctatggatacatgaggggcttcatgacaacacacggacaacctgaccagtcg
agatcagcccgttacatactcaaggattacgtcattggaaaactgctgtactgccaccct
cctccccacatcagtgctgcagacttccagccccagcacagcaagttccaggccggagat
gcagacggtgaagactccaagataggcaacaaaccgagcaaagtcaagaggcatgagaat
ctggtggacaagaacttcttccatcaggagaatgttcgggcgctcacaaagggggtccag
tctttcatgggttacaaggaaggcagcgtaggccagcgtgaactggtaaatcaagggaaa
cctggcttagaacagcctgtgggcaaaccctggaagaagcatggcaacaggaacaagaaa
gagaaagtacgccgactcaccaagcacctggatgcctga
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