KEGG   Oncorhynchus nerka (sockeye salmon): 115108258
Entry
115108258         CDS       T07952                                 
Name
(RefSeq) ras-related protein Rab-11B-like
  KO
K07905  Ras-related protein Rab-11B
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:one00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    115108258
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:one04131]
    115108258
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:one04147]
    115108258
   04031 GTP-binding proteins [BR:one04031]
    115108258
Membrane trafficking [BR:one04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab GTPases
    115108258
Exosome [BR:one04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   115108258
  Exosomal proteins of other body fluids (saliva and urine)
   115108258
  Exosomal proteins of colorectal cancer cells
   115108258
GTP-binding proteins [BR:one04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab11/25 [OT]
    115108258
SSDB
Motif
Pfam: Ras Roc Arf MMR_HSR1 GTP_EFTU RsgA_GTPase AAA_22 PduV-EutP Csa3_N Gtr1_RagA AAA_16 ABC_tran AAA_14 AAA_21 NTPase_1 TniB DUF3289 AAA_24 FAD-SLDH FeoB_N AAA_5
Other DBs
NCBI-GeneID: 115108258
NCBI-ProteinID: XP_029488250
LinkDB
Position
LG24:complement(40662552..40672492)
AA seq 217 aa
MGTRDDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKMI
KAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIM
LVGNKSDLRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIHRIVSQKQ
IADRSAHDESPGNNVVDISVPTTTDGQKNKLPCCQSL
NT seq 654 nt   +upstreamnt  +downstreamnt
atgggaacccgagacgacgaatacgactatctattcaaagtggtgctgatcggagactct
ggtgtggggaagagtaacctactgtcccgtttcacacggaatgagttcaacctggagagc
aaaagcaccatcggtgtggaattcgccacccgcagcatccaggtggacggcaagatgata
aaggcccagatctgggatacagctggacaggagcgctacagagccatcacctcagcgtac
taccggggggcggtgggggctctcctagtgtacgacattgccaagcatctaacctatgaa
aacgtggagcgctggctgaaggagctgagggatcatgctgataacaacatcgtcatcatg
ctggtaggcaacaagagtgacctgcgccacctcagggcagtgcccacagacgaggctcgc
gccttcgcagaaaaaaatacgctatcatttattgagacctcagctttggactccactaat
gtagaagaggcgttcaagaacatcctcacagaaatccaccgaatcgtatcacagaagcag
atagctgacagatcagcacatgacgagtctccaggcaacaatgtagtggacatcagtgtc
cccaccaccaccgatgggcagaaaaacaaactaccgtgctgccaaagcctgtga

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