Oncorhynchus nerka (sockeye salmon): 115108263
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Entry
115108263 CDS
T07952
Name
(RefSeq) LOW QUALITY PROTEIN: tight junction protein ZO-3-like
KO
K06097
tight junction protein 3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
115108263
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Guanylate_kin
SH3_2
Motif
Other DBs
NCBI-GeneID:
115108263
NCBI-ProteinID:
XP_029488257
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All DBs
Position
LG24:complement(40814746..40835146)
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AA seq
1337 aa
AA seq
DB search
MNLKQALKLVSYSVTPPQGRPDASLPLWPLPRTCQRNGMRQKPEMEELMIWEQHTITLSK
DSKMGFGFAISGGRDKPNPDSGGTAVMVSDVVRNGPAMGRLFVRDQIVMVNGVSMDNVYS
TFTIQNLKSCGKTANITVKRPRKVQLPASTRPSRAASHSNLLDQDPPRRIRRYSDGSDQA
PNPDHYSARSTTSDRNGTAHALPLMSGYKRLPHQNFLDKPIKTTLLKKKLTDEYGLKLGS
QIFIKHMTETGLAAKEGTLQEGDLILKINGMTTENLSLLETKHLVEKSRGKLTMMVLRDD
RKFLVSIPEVDDSAPNSEEDRRSHSSSELEDISDLDTDIPTPRNRVSRSATRERRTRRRA
EQPPLVAKSRDQSPVRSTLSRPAAKAYPSRRAPSESGSDRSASPPLVRKDSPDIADKYRT
LSGVSMLPNPKALPAVLDWATPRPSRPSSALRTRKVVSESDSDRSASPPPRRGESSRVTE
DHSRYRVLPDLPHPGTLSTPPISIRQDPPRRVSSPVKAPPPDSETESDSSSGPPQRQGTT
HRQDTRSRYRATPLVAVEPQVEPPKWKAPSITMSKHAKGRSGSESEASYATVPRREFADS
GGSSSQGSKDSYRALPEMQSSPAPVVRQDPPQRGMTPSRPVSDSSESDRAPSPPRRSGST
DVESNHSIPRRANGTVRYGISVKSNPPAYSKTEEPIYSLPPDSIPTPNLGYSSDLNTVSF
VKEGSVGLRLVGGNDVGIFVGGVQPNSPAHEQGMKEGDQIMQVNGVDFGHFNREEAAMFL
INIKRGEPVDIRTQNKMDIYKKILKSNLGDSFYIRTHFDNESEGHNSLAFTRGEVFRVVD
TMHRGKLGKWLAIRMGNDLHELDKGTIPNQAGAETLASMEQAQRASGGGGDRQVSGPRAE
FWKLRGLRGAKKNVRRTRDDLLQLTIQGKFPAYERVLLREANFKRPIVILGPLNDVAMEK
LAREMPDEYEVAEMVPRSSGADSASTVIKLDTVRRIAEKNKHPLLDITPTAVERLNYIQY
HPMVLFLDPHSRKDVKVMRQRMCPNSNKSSRRLYAQALKMRRHCGHLFAARIALQPSSNV
WYETLKDKIRHQQAKPVWVSEVTLEGGGEEELDALDRTHSDYLSAASDLEDTDGEAFTDG
EVYTDNEDLEEPFDSSNQPRISRPTALARSSEPAAEYPSPDPSPEPLGEVPPLMHVPEPR
STRRPSDSSPHDVVTDDTPSYHSFSDSDFSAIDPAVPTTHSDEHPDFIAPNPRIFVPEPP
SAELLPESPPSVTMSVIEKKLQQTHMAEPQERKASPSFIVLAHHQAVQTRRTQIRGSDSS
DDNDETEDFEWGPATEL
NT seq
4014 nt
NT seq
+upstream
nt +downstream
nt
atgaatctgaaacaggcgctaaaactggtcagttattcggtgacaccaccgcaagggcgg
ccagatgcgtctctccctttgtggcccctcccccgtacctgtcagaggaatggaatgaga
cagaaaccagagatggaagaattaatgatatgggagcagcatactataacactaagcaaa
gattccaagatggggtttggctttgcgatatcagggggcagagacaagccgaacccagac
tcagggggcacagctgtgatggtttcagatgtggtgcgaaacggacccgctatgggacgg
ctgttcgtcagagatcagatcgtcatggtcaatggagtgtccatggacaatgtctactct
accttcaccatccagaaccttaagtcatgtggcaaaacagccaacataacagtgaagcgt
cctcgtaaggtccagctcccagccagcaccagaccgtcgcgtgccgcctcccactccaac
ctgctggatcaggaccccccacggaggatccgacgctactctgatggctccgaccaggcc
cccaaccctgaccactacagcgctcgtagcactacctccgatcgcaacgggaccgctcac
gccctgccacttatgtcagggtacaaacggctgccacaccagaacttcctagacaagcca
atcaaaaccaccctgctgaagaagaaactcacagatgagtatggactgaagttgggaagc
caaatcttcatcaaacacatgacagagacgggtctggctgccaaggagggcactctgcag
gagggagacctcattctcaagatcaatgggatgacaacagagaacctgtccctgcttgag
accaagcacctggtggagaagtcccgggggaagctgaccatgatggtcctgagagacgac
cgcaagttcctggtcagcatccccgaggtggatgacagcgcccccaacagcgaggaggac
cgccgtagccacagcagctctgaactggaggacatttcagacctggatacagacatcccc
actcctagaaacagagtgtcacgctccgccactagagaacgacgcacacgcagaagagct
gagcaacctcctctagtagctaagtctcgtgaccagtccccggtgcgttcgacactgtcc
cggcctgctgctaaagcctacccctctcgccgagccccctcagagtccgggtctgaccgc
agtgcctcaccccctcttgtcaggaaggacagcccagacatagccgacaaatacagaact
ctttcaggggtgtccatgctccccaaccccaaagccttacctgctgtcctcgactgggcc
accccacgtccttcccgtccctcctccgccttgcgaactcgtaaagtggtgtcagagtcg
gactcggaccgcagtgcctcgccaccccctagaagaggagagagttccagagtcacagag
gaccactccagatacagagtgctccctgacctgccccaccctgggacactgagcaccccc
cccatctccattcgtcaggatcccccccgacgggtctcctctcctgtcaaagccccacct
ccagactctgagactgagtcggacagcagctccgggcccccccagagacagggcaccacc
cacaggcaggacacccggagcagatacagagccactcctttagtagctgtggagccccaa
gtggagccccccaagtggaaggcccccagtatcacaatgagcaaacatgctaaagggcgc
tcaggatcagagtcggaggcaagttatgcaaccgtacctcgacgggaatttgcagacagt
ggaggctccagttcccagggatccaaggacagttacagagctctgcctgagatgcagtct
tctccagctccagtagtgagacaggacccccctcaacgaggcatgaccccctccagacca
gtctcagattcctctgagtcagaccgtgcaccttcaccccctcggaggtctgggagtacc
gatgtggagagcaaccacagtattccacgcagagccaatggaactgtccgctatgggata
tcagtgaagagcaaccctccagcctactccaagaccgaggaacccatctactccttaccc
ccagactccatccccacacctaacttgggatacagctctgatctgaacacagtgtcgttt
gtgaaggagggcagcgtaggcctgaggctggtggggggtaatgacgtgggcatctttgtt
gggggggttcagcccaacagtcctgcccatgagcaaggcatgaaggagggggaccagatc
atgcaggtaaatggggtggactttggtcatttcaaccgtgaggaagctgctatgttcctg
atcaacattaagagaggggagccggtggacatccgtactcagaacaagatggacatatac
aagaagatactgaagtccaacttgggggactcgttctatatccggacccactttgacaac
gagtcagagggccacaacagcctagccttcaccaggggagaggtgttcagggtggtggac
accatgcacaggggcaagctggggaagtggctggctatacgcatgggcaacgacctgcac
gagctggacaagggcaccatccccaaccaggccggggctgagacactggccagtatggag
caggctcagagggccagtggaggaggaggggatcgccaggtctcagggcccagggcagag
ttctggaaactacgggggcttagaggggccaagaagaacgtccgccggacccgcgacgac
ctgctccaactcactatccagggcaaattcccagcgtacgagagagttctgctcagagaa
gctaatttcaaacggccaatcgtcatcttgggtcctctgaatgatgtggccatggagaag
ctggccagagagatgcctgatgaatatgaggtggcagagatggttcctcgtagtagtgga
gcagacagcgcttctacggtcatcaagctggacacagtccgaaggattgcagagaagaac
aagcaccctctgctggacattactcctactgcagtggagcgtctgaactacatccaatac
caccccatggtgctgttcctggacccacacagcaggaaggacgtcaaggtcatgaggcag
aggatgtgccccaactccaacaagagctccagacgcctctacgcacaggccctcaagatg
aggaggcactgcggccatctgttcgcagctcgtattgccctccagcccagctctaatgtg
tggtatgagactctgaaagacaagatcagacaccagcaggccaaacctgtctgggtctca
gaagtcacgttggagggaggcggagaggaggagctggatgcgttggaccggactcactcg
gactacctgagtgctgccagtgacctagaggacacggatggagaggcgtttacagacgga
gaggtctacactgacaatgaggacctggaggaaccatttgactccagcaaccagccccgg
atatccaggcccaccgctctggcccgctcctcagagcctgcagccgagtaccccagcccc
gacccatcccctgagcctctgggagaggtcccacccctgatgcatgtgcctgagcccagg
tcgacccgtcgtccatctgacagctctcctcacgatgtcgtcactgatgacaccccgtcc
tatcatagcttttcagattcggacttcagcgccattgacccggctgttccgaccacccac
tcggatgaacaccctgacttcatagcccctaaccccagaatctttgtccctgagcccccg
tcagccgagctgctgccagagagccccccatccgtcacaatgtcagtcatagagaagaaa
ctccaacagacccatatggcagaacctcaggagaggaaagcttccccatcattcattgtg
ttggcacaccaccaggctgtccagacgagacgcactcagatccgaggcagtgacagctcc
gatgacaatgacgagactgaggacttcgagtggggtccagctacagaactttag
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