Oncorhynchus nerka (sockeye salmon): 115108266
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Entry
115108266 CDS
T07952
Name
(RefSeq) protein strawberry notch homolog 2-like isoform X1
KO
K26273
protein strawberry notch
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
one03036
]
115108266
Chromosome and associated proteins [BR:
one03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
115108266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
SBNO
ResIII
Motif
Other DBs
NCBI-GeneID:
115108266
NCBI-ProteinID:
XP_029488258
LinkDB
All DBs
Position
LG24:complement(40850906..40969848)
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AA seq
1523 aa
AA seq
DB search
MPTLPSPSLAMDGENYLHPEGPQLDSSMFEVASSNMESSMYPSASWGSFSQQSGGYSAHC
PMQSENQQYHLNDTMPDMHIDMFSHSGFHDDFPCLNLPRNGGFPQDLSCIDDLSNNSLFS
SPADSLSEYADAQDFIHADNLAHVPTLWDINTPAQSQLELNANRFQGLSSLEDISAIIST
PPLGGYQVQRTQTPAEEEEEEEETEELGHVDTYADYKPSKSTIGISHPDIVVETNTLSSV
PPPDITYTLSIPNLTINCGLLSALQLEAIIYACQQHEVILQNNQRAGFLIGDGAGVGKGR
TVAGIILENYLKGRKKALWFSVSNDLKYDAERDLKDINAPTIPVHALNKIKYGDTATSEG
VLFATYSALIGESQAGGQRRTRLKQILDWCKPGFDGVIVFDECHKAKNATSTKMGKAVLD
LQHKLPLARVVYASATGASEPKNMIYMSRLGIWGDGTPFKTFDDFLHAIEKRGVGAMEIV
AMDMKVSGMYIARQLSFSGVSFRIEEISLDDDFKLVYNKSAKLWAETLAVFMRAADELCL
VSRKSLWGQFWSSHQRFFKYLCIAAKVRCLVELANKELEAGKCIVIGLQSTGEARTREVL
DENDGHLDRFVSAAEGVFKALVQKHFPSEKPRREKAPGNKRKRKPRGRQPKFPKHTMVDP
GGVINISDDSSTDTDGMDTDSNSSPDSLLDNNNDDDVIFVDTRIEEMKQDLLNKIADLGK
ELPLNTLDELIDKLGGPEKVSEMTGRKGRVVRRPDGSVRYESRAEQSHTIDHINLKEKDR
FMCGEKLVAIISEAASSGISLQADKRVKNQCRRVHMTLELPWSADRAIQQFGRTHRSNQV
TAPEYIFLISELAGERRFASIVAKRLESLGALTHGDRRATESRDLSKYNFENKYGTKALD
KITKAILGHIESKVSPPKGYPGGDSLFFRDMKHGMMDVGIFCKEPRFGLSTEKDCSITKF
LNRILGLEVHKQNSLFQYFTDNFDYLIEKDKKEGKYDMGILDLAPGNDEIYEEKQETFMT
VGNPQDGQVVLYKISVDRGMPWEEAYEKAQNLNSPDEGFYLSYKLRGNHPCVLLAEQGRG
RNFIVYKPNIGKQAHPESLDNLQQRYRKVTPDQAKDSWESQFNFSFGKCSHANWNGKCKK
IEEGQECLQGMRLRQYHMLCGALLRVWKRVADVVSDITSSSILQIVRLKTKNSNKQVGIK
IPENCVARVRVELLKMDEEVKRRRKEREQHAQEQRLAEQRQLQDIHLLAKPYSQPHSLSQ
SHRTQNFYQSLIQAKPLQVKPLLQPKPQPSPINQLPSMASIFSHFPHHFPSLPPMQPAPT
STTKPFRVGEEVLDLTVSSSPSPDSTEGVLGLISLTGGSDFDLERLISRHALAAQNTAHI
LQQPLQPPLIKQRQLQSPQQIQPQLQQWSDQPLINSAHQDYYILDHPDSLPYSLSSQTAT
NPSTSSTSSSSSNTVAHVSSPSTPSHFSSSALAPSEQQPLPLANSHCSTDTLINAREVLD
NMMRTSADRQSVIQYQPNEWDSA
NT seq
4572 nt
NT seq
+upstream
nt +downstream
nt
atgcccacactcccgtcaccctcactggccatggacggggagaactacctgcacccagag
gggccgcagctggacagcagcatgttcgaagtggcctcttccaatatggagagttctatg
tatccttctgcttcctggggatcattctcacagcagtctggaggctacagcgcacactgc
cctatgcaatctgaaaaccagcaataccacttgaatgacaccatgccggatatgcacatc
gacatgttcagccattctgggttccatgacgatttcccctgcctcaacctccccagaaac
ggaggcttccctcaggacctgtcctgcatcgatgacctctccaacaactctctgttctcc
tctccggccgactctctgtcagagtacgccgatgcccaggacttcatccacgcagacaac
ctggcccacgtgcctacgctatgggacataaacacaccagcacaaagccagctggagcta
aatgccaacaggtttcagggtttgagcagtttggaggatatctctgccattatcagcacc
ccacctttgggaggataccaggttcagagaacccagactccggcagaagaggaggaggag
gaggaggagacagaggagctgggacatgtagacacctacgccgactacaaaccatccaaa
tctaccatagggatctcccacccagacatagtggtggagaccaacacactgtccagcgtc
cctcctcctgacatcacctacactctatccattcctaacctcaccatcaactgtggcctg
ctctctgccctgcaactcgaggccatcatctacgcctgccagcaacatgaggtgatcctg
cagaacaaccagagagcaggcttcctgataggagacggggccggagtggggaagggccgt
acggtggccggcatcatcctggagaattaccttaaaggaaggaagaaagcactatggttc
agtgtgtccaatgacctgaaatacgacgcagagagagatctcaaagacataaatgctccc
actattcctgtgcatgccttaaacaagataaagtatggcgacacagctacctcagaagga
gtcctgtttgcgacatactctgctctgattggtgagagtcaagcaggagggcagcgccgc
accagactcaagcagatcctggactggtgcaagcccggctttgacggcgtcattgtgttt
gacgaatgccacaaggccaagaatgccacgtccaccaagatgggcaaggccgtgctggac
ctgcagcacaagctgcccctggccagggtggtttatgccagtgccacaggtgcctctgag
ccaaagaacatgatttatatgagtcgcctggggatctggggcgacggcacgcctttcaag
acctttgatgattttctgcacgccatcgagaagaggggtgtgggcgccatggagattgtt
gcaatggacatgaaggtgagtgggatgtacatcgcccgacagctgagcttctcgggggtg
tccttccgcattgaggaaatcagcctggacgacgacttcaaactggtctacaacaaatct
gccaaactgtgggcggagactctggccgtgttcatgcgtgcagcggatgagctgtgcttg
gtcagcaggaagtccctgtggggtcagttctggtcttctcaccagcgcttcttcaaatac
ctctgcatcgccgccaaggtccgctgcctggtggagctggccaataaggagctggaggct
ggcaagtgcattgtgattggtctacagtctacaggagaggcccgaaccagagaggtcctg
gatgagaacgatggacacctggacagattcgtatccgcagcagagggggtgttcaaagct
ctggtacagaaacactttccctctgagaagccgaggagagagaaagcgcctggaaacaag
agaaaacgtaagcccaggggccggcagcccaagttcccaaagcacaccatggtggatccg
gggggtgtaatcaacatcagtgacgacagcagcacggacacggacggcatggacaccgac
tccaactcctcacccgactccctgctggacaacaacaacgacgacgacgtcatcttcgtc
gacaccaggatagaggagatgaagcaggacctcctgaacaagatcgctgatctggggaag
gagctacctctgaacactctggatgaactcatcgacaagttgggaggtccagagaaagtc
tcggagatgactggtcgtaaggggcgtgtggtgcgacggcctgacgggagcgtgcgctac
gagtcgcgtgcggagcagagccataccatcgaccacatcaaccttaaggagaaggaccgc
ttcatgtgcggagagaagctggtggccatcatctcagaggcagccagctcgggcatctcc
ctgcaggcagacaagcgggtgaagaaccagtgtcggagggtccatatgacgctggagctg
ccctggagtgcagacagagccattcagcagtttggtcgtacccatcgctccaaccaggtg
acggctccagagtacatcttcctcatctctgagctggccggggagagacgttttgcctcc
atcgtggccaagagactggagagcctgggtgcattgacccacggtgacaggagagccaca
gagtccagagacctgagcaaatacaactttgaaaacaagtatggtaccaaggctctagat
aagatcaccaaagccatcctgggtcacattgagagcaaggtgtcccctcccaaaggctac
cccgggggcgattccctgttcttcagagacatgaagcatggcatgatggacgtgggcatc
ttctgcaaggagcctcgttttggtctcagtactgaaaaagactgcagcatcaccaagttc
ctcaacaggatcctgggcctggaggtccacaagcagaactctctgttccagtacttcact
gacaactttgactacctgatcgaaaaggacaagaaggagggcaaatacgacatgggcatc
ttagatctggccccaggtaacgatgaaatctatgaggagaaacaggaaaccttcatgaca
gtgggtaacccccaggacggacaggttgtgctctacaagatcagcgtggatagagggatg
ccctgggaggaggcctacgagaaggcccagaacctcaacagtcctgacgaaggcttctac
ctctcctacaagttgcgggggaaccacccttgtgtgctgctggcggagcagggccgaggg
aggaacttcatcgtctacaagcccaacatcggcaagcaggcccaccctgagagcctggac
aacctgcagcaacgctaccgcaaggtgaccccagaccaagccaaggacagctgggagagc
cagttcaatttctcctttgggaaatgtagccatgctaactggaacgggaagtgtaagaag
atcgaggagggacaggagtgtctgcagggtatgcgtctgcgccagtaccacatgctgtgc
ggggcactgctacgtgtctggaagcgcgtggctgacgtggtctctgacatcaccagctcc
agcatcctgcagatcgtacgcctcaaaaccaaaaatagtaacaagcaagtcggtatcaag
atcccagaaaactgcgtggcccgtgtgcgagtggagcttctcaaaatggatgaggaggta
aagaggaggcgcaaggagagggagcagcatgcccaggagcagaggctagccgagcagcgg
cagcttcaggacatacacctgcttgccaagccctacagccagccccacagcctgtctcag
agccacaggactcagaacttctaccagagcctgatccaggccaagcctttacaggtcaag
cctctactacagcccaaaccccagcccagcccgatcaaccagctccccagcatggccagc
atcttctcccacttcccccaccacttcccctccctgcccccaatgcagcccgctccaacc
tccaccaccaagcccttccgggttggggaggaggtcctggacctgacggtgagctcctct
ccctccccagacagcacggagggagtcctgggccttatcagcctgacagggggctccgac
tttgacctggagagactgatatcgcggcacgcactcgccgcccagaacacagcacacatt
ctgcagcaacctctacagccaccactgatcaaacagcggcagctacagtcgccacagcag
atacaaccacagctacagcagtggtcagatcagcctttaatcaacagcgcccaccaggac
tactatatccttgaccatccagactctctgccttactctctgtccagccagacagctact
aacccctccacctcttctacctcctcctcttcctccaacacagtggctcacgtctcgtcc
ccctccaccccctctcacttctcctcctcggcccttgccccctcagaacagcagcccctc
cctctagccaacagccactgcagcacggacacactcatcaacgcacgcgaggtcctggac
aacatgatgcggaccagtgcggaccgccagtcggttatccagtaccagccgaacgaatgg
gactctgcgtaa
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integrated database retrieval system
