Oncorhynchus nerka (sockeye salmon): 115108287
Help
Entry
115108287 CDS
T07952
Name
(RefSeq) E3 ubiquitin-protein ligase RNF126-like
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108287
04121 Ubiquitin system [BR:
one04121
]
115108287
Enzymes [BR:
one01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115108287
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
115108287
Ubiquitin system [BR:
one04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115108287
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
Zn_ribbon_19
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
FAR1_N
zf-Nse
DUF8608
zf-RING_16
HypA
C1_2
DZR
RING_Ste5
DZR_2
Motif
Other DBs
NCBI-GeneID:
115108287
NCBI-ProteinID:
XP_029488298
LinkDB
All DBs
Position
LG24:42021101..42026140
Genome browser
AA seq
312 aa
AA seq
DB search
MAEAPPWPRQFFCHRCSEEISPRLPDYTCPRCESGFIEELLEERSSENGSTSTISSGDQN
QQSLENVDSSHMATFPSGYGQFSLGVFDDSFDFGAGQGTEDNRDTENRREQELASRQRYG
ARQPRGRHDIRGQAGRHEGVPTLEGIIQQLVNGIIAPTAMPNIGVGPWGVLHSNPMDYAW
GANGLDAIITQLLNQFENTGPPPADRDKIKSLPTIPITQEHVVSGLECPVCKEDYSAGEN
VRQLPCNHLFHNDCIIPWLEQHDTCPVCRKSLSGQNTAMNPPGLSGMNFAAASSPTPPSS
TSTNNENSANNC
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atggcagaagcacctccatggcccagacagtttttctgtcacagatgttcggaagagatc
agccctcgcctcccggattacacatgtccacggtgtgaatctggcttcatcgaggaactg
ctggaggaaagaagcagtgaaaatgggtccacatccaccatctccagcggtgatcagaac
caacagtcgttagagaatgtggactcttcacacatggctacattcccatcgggttacgga
caattttctctgggtgtctttgacgactcctttgattttggagcggggcagggaacagag
gacaaccgcgacacagagaaccggcgggaacaggagttggcatcacggcagcgttacggc
gccaggcaacctcgtggccgccatgacatccggggacaggcagggagacatgagggagtg
cccactctagagggaatcattcagcagctagtgaatggaataatcgcccctacggcaatg
ccaaatattggtgtgggaccctggggcgtgctccactcaaaccccatggattatgcctgg
ggtgccaatggactagatgcaatcattacacagttattaaatcaatttgagaacactggc
cctccgccagctgacagggacaaaatcaagagccttcccacaatcccaatcacacaggag
catgttgtctcaggtctagaatgtccagtctgtaaagaagactacagtgctggagaaaac
gttaggcaacttccatgtaatcatttgtttcataatgattgcataataccttggcttgaa
cagcacgacacatgtccagtgtgcaggaaaagcttgagtggacagaacaccgctatgaat
cctccaggtctatcagggatgaactttgccgcggcctcatcccctacacccccgtcctcc
acttcaaccaacaacgaaaactcagccaacaactgctaa
DBGET
integrated database retrieval system
