Oncorhynchus nerka (sockeye salmon): 115108289
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Entry
115108289 CDS
T07952
Name
(RefSeq) potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2-like
KO
K04955
hyperpolarization activated cyclic nucleotide-gated potassium channel 2
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
one04040
]
115108289
Ion channels [BR:
one04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (HCN)
115108289
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Motif
Pfam:
Ion_trans
Ion_trans_N
cNMP_binding
Ion_trans_2
Com_YlbF
Motif
Other DBs
NCBI-GeneID:
115108289
NCBI-ProteinID:
XP_029488301
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Position
LG24:42044619..42113445
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AA seq
1073 aa
AA seq
DB search
MDEAEDGEDESKFQQPLLCGTGSVGGGGDRNGLSLKMKQFTPGGGASSTARKNSNNELWF
MQGEESAPCAPTGATSCALLCQGDATARGGSYYRAGGDLAPGSSVTVLATCWTGEGTTGV
ICNNNGDCRRDPNISGSLSSIVSRQGKQTGGIVAADNGKRPTRCNSRVASMDGSITSVQG
QGPEVAGATTTGNEKKDSRVSFSSAPNRKASSSVQNQQNRNSLAFFKSEDGPQIVPDDGE
PQDNRTYMQRQFSSMLQPGVNKFSLRMFGSQKAVEKEQERVQSAGNWIIHPYSDFRFYWD
FTMLMFMVGNLIIIPVGITFFKDETTAPWIIFNVVSDTFFLMDLVLNFRTGIVFEDNTEI
ILDPRKIKRTYLKTWFLVDFVSSIPVDYIFLIVEKGIDSELYKTARALRILRFTKILSLL
RLLRLSRLIRYIHQWEEIFHMTYDLASAVMRIFNLIGMMLLLCHWDGCLQFLVPMLQDFP
QDCWVSLNKMVNDSWSELYSFALFKAMSHMLCIGYGRQAPESMSDIWLTMLSMIVGATCY
AMFIGHATALIQSLDSSRRQYQEKYKQVEQYMSFHKLPADFRQKIHDYYEHRYQGKMFDE
ESILEELNEPLREEIVNFNCRKLVASMPLFANADPNFVTAMLTKLRFEVFQPGDYIIREG
TIGKKMYFIQHGVTSVLTKGTMGMKLSDGSYFGEICLLTRGRRTASVRADTYCRLYSLSV
DNFNEVLEEYPMMRRAFETVAIDRLDRIGKKNSILMHKVQHDLNSGVFNNRENEIIQEIV
KYDREMVQQVDMQRPRAMSMSNPPTHGGIFAPPAPPQSSAIATLQQAVAMSFCPPMAGPL
VGAGALQSPRMVRRFQVMQSMSASPPPQTEQTMQPQLHAGGAFASALSSPPIQSPLAAGG
RTFQYGHSSGSQLSLVQQIIPSPPHRPNTHNSTRSLHMGSLSQDARALSASQPSLPQGGA
QPVAPSPSQSNRVSSTSIGPPQTPPGSVGLRSAVTHRMVLPHQMSVGAFPLASLPGTLTS
LGTGMGAGMGIGMGVGMGSGLAPALPDSGLPKKDSKASHPETDHVRSRLSSNL
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atggacgaggctgaggatggagaagatgagtccaaattccagcagcctttattgtgcgga
accggctccgttggtggcggaggcgataggaacggtctaagtttgaagatgaagcaattt
acgccaggagggggagcatcatcaacagcgcgcaagaactccaacaatgagctgtggttc
atgcaaggcgaagagtccgcaccttgtgctcctacaggcgccacaagctgtgctctgtta
tgccagggagatgctactgcccgtggcggctcatactatagggctggaggggacttagcc
ccagggtcatcggtaaccgtgttggctacttgttggacaggtgaaggcactaccggtgtg
atatgcaacaacaacggagattgcagaagggaccccaacatttcagggagcctgtcctcc
atcgtctctaggcaggggaaacagaccggtggaatagttgcagcggacaacgggaaaagg
ccaactagatgtaattccagagtcgccagcatggacggttcgatcacctcagtacagggg
caagggcccgaggtggccggggccacaactactggtaatgagaaaaaggactccagagtt
tccttctcaagtgcccctaatagaaaagcatcgtcctctgtgcagaaccaacagaacagg
aattctctcgcattttttaaatcggaggatggaccccagattgtgccagatgatggggaa
ccgcaggacaatcggacttatatgcagcgccaatttagttccatgcttcagcctggagtt
aataaattttccctgcgtatgtttgggagccaaaaagcggtggaaaaggaacaagagcgc
gtccaatcggccggtaattggattattcatccatacagcgatttcaggttctactgggat
ttcaccatgctgatgttcatggtgggcaacctcatcatcatccccgttgggatcaccttc
ttcaaggacgagaccaccgcgccctggatcatcttcaacgtggtctctgacaccttcttc
ctcatggacctggtcctcaacttccgcacaggcattgtatttgaggacaacaccgagatc
atcctggaccccaggaagatcaagaggacgtacctgaagacctggttcttggtggacttt
gtctcctccatccctgtggattatatcttcctgatcgttgagaaggggatcgactctgag
ttgtataaaacggccagagccctgaggatcctacgctttaccaagatcctcagtctgctg
aggctgctcaggctgtccaggctaatccgctacatccaccaatgggaagagatcttccat
atgacctatgacctggccagtgcagtgatgcgtatcttcaacctgattggtatgatgctg
ctgctgtgtcactgggatggctgtttgcagttcctggttcccatgctgcaggacttcccc
caggactgttgggtctctctcaacaagatggtgaacgactcgtggagcgagctgtactcc
tttgccctgttcaaggccatgagtcacatgctgtgtatcggttacgggcgccaagcccca
gagagcatgtctgatatctggctgaccatgctcagtatgatcgtgggcgccacctgctat
gccatgttcattggccatgccaccgccctcatccagtccctggactcatcccggcgccag
taccaggagaagtacaaacaagtggagcagtacatgtctttccacaaactgccagctgac
ttccgacagaaaatccatgactactatgaacacagataccagggcaagatgtttgatgag
gagagcatcctggaggagcttaatgaaccactgcgggaggaaattgtcaacttcaactgc
cgtaagctggtggcatccatgcccctgtttgccaatgccgaccccaactttgtgacagcc
atgttgaccaagctccgcttcgaggtcttccagcccggagattacatcatcagggagggc
accatcggcaagaagatgtacttcatccaacatggtgtgaccagcgtgctgaccaaagga
actatgggcatgaagctttctgatggatcctactttggagagatctgtctgttgacccga
ggcagacggacggccagtgtgcgggcggacacgtactgccgtctctactccctgtctgtg
gataacttcaatgaggtgctggaggagtacccaatgatgagacgagccttcgagactgtg
gccatcgaccgactggaccggatagggaagaagaactcaatcctaatgcacaaggttcag
catgacctcaactcgggtgtcttcaacaaccgagagaatgaaattatccaagagattgtg
aaatatgaccgtgagatggtgcagcaggtggacatgcagaggcctcgtgccatgtccatg
tccaacccccccacgcacgggggtatcttcgctcctccagccccacctcagagctcagcc
atcgccaccctccagcaggctgtggctatgagcttctgtccccccatggcaggccccctg
gtaggggccggggccctgcagtcacctcggatggtacggaggttccaggtgatgcagagc
atgtcagcctcccctcctccccagactgagcagaccatgcagccccagctacacgccggt
ggtgccttcgcctccgccctctcgagcccccccatccagagccccctagctgctggggga
cggacattccagtacggccactcttctggctcccagctctccctggtccagcagatcata
cccagccccccacaccggcccaacacccataacagcacccgctctctgcacatgggcagt
ctgagtcaggacgccagggcactgtctgcctctcagccctctctgccccagggaggggct
caacccgtggccccgagcccatcacagtccaaccgtgtttcctcaacatccattgggcca
cctcagacccctccgggctctgtggggctcaggagcgctgtgactcataggatggtgctg
ccccaccagatgtctgtgggggcgtttcctctagcctccctcccggggactctgacatcg
ctggggacaggcatgggtgcgggtatgggaatcggcatgggagtgggcatgggatcaggc
ttggcgccagcccttccggactcgggtttacccaaaaaggactccaaagccagccaccct
gagacagaccatgtcagatcgaggctatcttccaatttgtga
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