Oncorhynchus nerka (sockeye salmon): 115108304
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Entry
115108304 CDS
T07952
Name
(RefSeq) unconventional myosin-Vb-like
KO
K10357
myosin V
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
115108304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
one03019
]
115108304
04131 Membrane trafficking [BR:
one04131
]
115108304
03029 Mitochondrial biogenesis [BR:
one03029
]
115108304
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
one04812
]
115108304
Messenger RNA biogenesis [BR:
one03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
115108304
mRNA cycle factors
P-body specific factors
115108304
Membrane trafficking [BR:
one04131
]
Others
Actin-binding proteins
Myosins
115108304
Mitochondrial biogenesis [BR:
one03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
115108304
Cytoskeleton proteins [BR:
one04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Myosins
115108304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myosin_head
DIL
IQ
Myosin_N
nSTAND3
AAA_22
Motif
Other DBs
NCBI-GeneID:
115108304
NCBI-ProteinID:
XP_029488331
LinkDB
All DBs
Position
LG24:complement(42864819..42884101)
Genome browser
AA seq
1684 aa
AA seq
DB search
MIGTMELYAKGASVWVPDPEAVWVSAKLLKDYNLGDENVVLQISDGREVQYPVASPSGLP
PLANPDILEGENDLTALSFLHEPAVLHNLRVRFLDYSSIYTYCGIVLVALNPYDQLPIYG
EEVIDAYSGQDMADMEPHIFSVAEEAYRTMTREEKNQSIIISGESGAGKTVSAKFTMRYF
AVVGGAAQQTSVEERVLASNPIMESIGNAKTTRNDNSSRFGKYIEIGFGRKGDIIGANMR
TYLLEKSRVVFQASQERNYHIFYQLCASRDLPEMRVLKLGGAETFRYTNQGGEDSMQIPG
TDDVVDLERTRNAFTILGVPPDQQMELFRILAAVLHLGNVNIQASGRGGDRSYIDGEERS
LSVFSKLLGVERTQMAHWLCHRRLTVGGEMLVKPMPGQQSLEARDALAKHVYGQLFTWTV
TRLNSALRAQSEKPKSFIGVLDIYGFETFERNSFEQFCINYANEKLQQQFNRHVFQLEQE
EYVREELLWSRIEFSDNQPCIALIEGQLGLLDLLDEECRMPKGSEESWARKLYDQHQSNN
PSPHFRKPRMSNTAFIILHFADMVQYECDGFLDKNRDTVFEEPINILRASQSELVSELFQ
QKPVGGSLSLSEGKSSLSNGSLRSGPGMRAQREHKLTVGFQFRQSLQLLMDTLNSTTPHY
IRCIKPNDLKEPFMFDPKRAVQQLRACGVLETIRISAAGYPSRWTYAEFFSRYRVLLRGG
GVQTQEQIQASCQRALPELIPDPEQYCFGKTKVFFRAGQVALLERLRAERLRAAGVIIQS
WVRGWLGRRRYIKTRWATLTIQRYTRGALARRLADLLRYTKAALIIQKTYRMVAIRQMFL
MIREATVTIQAFTRGSLARRQYRRVVAERAAVLLQSAVRGWLARLTYRRVRAAIVLMQCC
VRRRAARRELLKLKAEARSVEKFRELNKGMEVKLMQLQLRADQKARESSALRETLQAERK
AHNTELDTLRGALVKLEYQLETQLQTQQSQPSTAITEEEMEERRRAEEKAAQEILRLTQE
VQALRVERDCLGKEKEDLTTRLLEQETAQEESVVQAVAQEGKALTAELDEERRKYQGLLR
EFTRLEQRYENLREMSMLTEHSKGYRRTDSNQSLIMEPPSPSPMSPPFSGPPTFPATPSF
FGLPPFPSPEEVRRVSVTSPTAERRAWLSSDTLMDTLMENMGVAKDSAGKMTGEDLWHAY
DAVRVANKFLENQLRSQRSQEEAELKAELEAKRTCSVPSPSADQQYLVGLVEAREQEVCR
LRRELKELRHTVTLRRLLAQTGPVLSQSTEDSSAPHAKAGTVTGLLECRKRDEAKLMKTL
ITDVRVDSALSLPPGLAASVLFLCVRQADCSGDEIRARSLCTAAVTAMKGALKKHCNDVD
MTALWLKNACLLNDLLTQHSKQDEDLVPLTSDLSELNRALSALCIQAYQQLLSISETRLQ
PIIVPAMLESEMIPGLSGSGVKLGNFRKRAGSDPRAVERNAGETPSMAAVLRELGALHTA
LSRQALPPTLMEQAFRQLTHLLSASALNSLLLRKDMCSWSRGLQIRYNVSLLEEWLRTRG
LQAGGAVALLEPLIQAAQLLQVGKKTDADAQALVHTCTALSTQQIVKILTLYTPHSDLEE
RVTLNFIRTVQGLLKERSGGQPPQLLMDVRRVFPVTFPYLLPPPVRADQLDIPDTLKISF
LRRP
NT seq
5055 nt
NT seq
+upstream
nt +downstream
nt
atgattggaactatggagttgtacgccaagggtgccagtgtgtgggtacctgacccagag
gcagtgtgggtatcagccaagctcctcaaggactacaaccttggagatgagaatgtggtg
ctgcagatcagcgatggcagggaggtgcagtacccagttgcgtcaccctctggcctcccc
cctctggcgaaccctgatattctggagggggagaatgacctcactgctctcagcttcctg
cacgagcctgctgttctacacaacctgagagtccgattcctggactacagcagcatctac
acctactgtgggattgtgttggtggccctcaacccatatgaccagctgcccatctatgga
gaggaagtgatcgatgcctacagtgggcaggacatggctgacatggagcctcacatcttc
tctgtggcagaagaggcctaccgcaccatgaccagggaggagaagaaccagtccattata
atcagtggggaatctggagcagggaaaacagtctcggctaagttcaccatgcgctacttt
gctgtggtggggggagcagcccagcagaccagtgtggaggagagagtactggcctccaac
cctatcatggagtccattgggaatgctaagactacacgcaatgacaacagtagccggttt
gggaagtacattgagatcggcttcggacggaagggggacatcattggggccaacatgagg
acgtatctgctggagaagtctcgagtcgtcttccaggcgtcacaggagagaaactaccac
atcttctaccagctgtgtgcttctagagacctgccagagatgagagtcctcaaactgggt
ggtgcggaaacgttccgctacacgaaccaaggaggggaagattccatgcagatcccaggc
actgatgatgtagtagatctggagcgcactcgcaatgctttcaccattctaggtgtgcct
ccggaccagcagatggagctcttcaggatccttgcagctgttctgcacctgggcaatgtc
aacatccaggccagtgggagaggtggtgatcgaagttacattgatggggaggagcgttcc
ctgtcggtgttctccaagctgctgggggtggagaggacccagatggcccactggctgtgc
caccgcaggctgacagtagggggagagatgctggtcaagcccatgcctggtcagcagtcc
ctagaggcccgggatgccctggccaagcatgtgtacggtcagctgttcacctggacagtg
acccggctcaactcagccctccgagcccagagcgagaagcccaagtcatttattggggtg
ctggacatctatgggtttgagacatttgaaaggaacagttttgaacagttctgtataaat
tacgccaatgagaaattgcagcagcaattcaacaggcacgtgttccagttggagcaggag
gagtatgtccgtgaggagctgctgtggagcaggatagagttcagtgataaccagccgtgc
atcgctctcatcgagggacagctgggcctgctcgacctgctggatgaggagtgcaggatg
cccaaaggttcagaggagagctgggctaggaagctgtatgatcagcatcagagtaacaac
cccagtccacacttccgcaaacctcgaatgtccaacactgccttcatcatcctgcacttt
gctgacatggtccaatatgaatgtgatgggtttttagacaagaaccgggatacagttttt
gaggaacccatcaacatcctaagagccagtcagtctgagctggtgtctgagctgttccag
cagaagccagtagggggcagtctgtccctctcagaggggaagtcctctttgtccaatggc
agtctgcgctctggccctgggatgagagctcagcgggaacacaaactcactgtgggcttc
cagttccgtcagtctctgcagctgctgatggacactctgaacagcaccaccccccactac
atccgctgtattaagcccaatgacctcaaagagccttttatgtttgaccctaaaagggcc
gtccagcagctgcgagcctgtggggtgctagagaccatacgcatcagtgctgcaggctac
ccatccaggtggacttatgcagagttcttcagccggtaccgggtgctgctgcgtgggggt
ggggttcagactcaggaacagattcaggcgtcgtgccagagggccctgccggagctcatt
ccagacccggagcagtattgctttgggaagaccaaggtgttcttccgtgctgggcaggtg
gctctgctggagaggctgagggcagagagactgagggcggccggggtgatcatccagagc
tgggtcagaggctggctgggccgcaggcgatacatcaagacacgctgggcaacactcacc
atccagagatacacaagaggagccctggctaggcggctggcagaccttctgcgctacacc
aaggcagcgctgatcatccagaagacataccgtatggtggcgataagacagatgtttctg
atgatccgcgaggccaccgtcaccatccaggctttcaccaggggctcgctggcacgacgc
caatacagacgggtggtggcagagcgggctgccgtgttgctccagtctgcagtgcgtggc
tggctggcccgcctaacttacaggagggtgagggccgccatagtgttgatgcagtgttgt
gtgaggcggcgggctgccaggagggagctgctgaagctgaaggcagaggctcgctcggtg
gagaagttcagagaactcaacaagggcatggaggtcaaactgatgcagctgcagctcagg
gccgaccagaaggccagggagagcagtgctctgagagagaccctccaggcggagcgtaag
gcccacaacactgagctggacaccctgcggggggcgctagttaagctggagtaccagtta
gagacccagctccagactcagcagtctcagcccagcaccgccatcacagaggaggagatg
gaggagaggaggagggcagaggaaaaagcagcccaggagatcctacgactcacacaggag
gtgcaggccctgcgggttgagagggactgtttggggaaagagaaggaggatctgaccact
cgattactggagcaggagacagctcaggaggagagtgtagtacaggctgtggcccaggaa
ggtaaagctctgacagcagagctggatgaggagaggaggaagtaccagggtctgctcaga
gagttcaccaggctggagcagagatacgaaaacctacgggaaatgagcatgctcactgag
cactctaagggctacagacggacagattcaaaccaaagcctgatcatggagcccccatct
ccttccccgatgtcgccgcccttttccgggccccctaccttcccagccacaccttccttc
ttcggcctccctcccttcccctctccggaggaggtgaggagggttagtgtgacgtccccc
accgcagagaggagggcctggcttagctctgacacactcatggacactttgatggagaat
atgggtgtggctaaagactcagccgggaagatgaccggagaagacctgtggcacgcctat
gatgctgtacgagtggccaacaagttcctggagaaccagctgcgtagccagcgctctcag
gaggaggcggagctgaaggcggagctggaggctaaacggacgtgctctgttccctccccc
tctgcagaccagcagtacctggtgggactggtggaagccagggagcaggaggtctgcaga
ctgaggagagaactgaaggagctgagacacacagtcacactcagaagactactggcacag
acaggcccagtgctttcccagtccacagaggattcctctgccccccatgccaaagctggg
actgtcacagggctgctggagtgtaggaagagggatgaggccaagctcatgaagaccctc
atcacagacgtgagggtggacagtgccctctccctgccccctggcctggctgctagtgtg
ctgttcctgtgtgtacgccaggcagactgtagcggagacgaaatccgcgcccgctctctc
tgcactgctgctgtcactgccatgaagggggctctgaaaaaacactgtaatgatgtggac
atgacagcactgtggctgaaaaatgcctgccttctcaatgacctactgacccagcactcc
aaacaggatgaggatttggttccgttgacctctgacctgagtgagttaaaccgtgctctg
agtgccctctgtatccaggcctatcagcagctcctgtccatctcagaaacccgcctgcag
cccatcattgttcctgccatgctggagagtgagatgatcccaggactgtctgggtcgggg
gtgaagctggggaactttaggaagcgtgcagggtctgatcccagggccgtagagaggaat
gcaggggagacccctagtatggctgcagtgctgagggagctgggtgccctccacacggcc
ctgtcccgccaggccctaccccccaccctgatggagcaggccttccgtcagctcacccac
ctcctttctgcctctgccctcaacagcctgctgctacgcaaggacatgtgtagctggagc
cgaggcttgcagatacggtataatgtgagtctgctggaggagtggctgcggacccgtggg
ctgcaggcagggggagctgtggccctgttggagcctctcatccaggccgctcagctcctg
caagtgggcaagaagacagacgctgacgcacaggccctcgttcacacctgcactgccctg
tctacccagcagattgtgaagattctgaccctgtacacccctcacagtgacctagaggag
agggtgacactcaattttatccgcacagtgcagggtctgctgaaggagcgttcaggcggt
cagcctccacagctgctgatggacgtacggcgtgtgttccccgtcaccttcccctacctg
ctgcccccgcctgtccgcgctgaccagctggacatcccagacaccctcaaaatctccttc
ctacgacggccttag
DBGET
integrated database retrieval system
