KEGG   Oncorhynchus nerka (sockeye salmon): 115108317
Entry
115108317         CDS       T07952                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL-like isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
one  Oncorhynchus nerka (sockeye salmon)
Pathway
one03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:one00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    115108317
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:one01009]
    115108317
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:one03021]
    115108317
Protein phosphatases and associated proteins [BR:one01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     115108317
Transcription machinery [BR:one03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     115108317
    Little elongation complex (LEC)
     115108317
SSDB
Motif
Pfam: ELL Occludin_ELL CC149 Seryl_tRNA_N
Other DBs
NCBI-GeneID: 115108317
NCBI-ProteinID: XP_029488365
LinkDB
Position
LG24:complement(43325885..43369217)
AA seq 647 aa
MAALKEEQCYGLSCGRVSNGSNVSVFHVKLTDSALKAFEGYQSSKGLSSQPLIRFTGSQG
KISIPWSENPNELRLFTFYLSNVGRDNPQGSFDCIQQYITSEGSIQLDCLGGIQDKITVC
ATDDSYQKARQSMAQAEEETRSRGAIVIKPGGRYVGKKVQIRKPAPGLSDIAPSRRTSRP
VIISSSAAKKSTAQQRPLRERLTHLLALKPYRKPELILRLQKDGLLPFDKDSLDSLLQQV
ANLNVRDNTFTLKDSLFKDIQKDWPGYTEGDQQLLKRILVRKMCQTPSTTTVAPPAEVPL
PVSPPKELASSSPSQKRPAADFIDPLANKKPRISHMANKTAVPINGKQSSSNGKEGSGAV
VVAPAVEGVTSSSQLPLLDIHRPFDPLSDVSNDSSHNGRDCEGQEAAVAERLSQPPVFSG
PAVLSVPTLGLSSLGHTGLDGPQSKSTLPSLHGKSKKKSKKHKDKEKSKEREGRGREKER
KGAEERVPEPRKACDITSSPENLKSSSIPHSSTDLNGMCNNTSVPSSSTEMADYLLEYTV
IGSSEQRQTYKNYFNTEYSEYRGLHARIEGITRQFTVLDTELKQLQQGTDKYKTIHNQIL
QEYRKIKKTNPNYSQEKNRCEYLHSKLSHIKKLIAKYDQQQLQNWTG
NT seq 1944 nt   +upstreamnt  +downstreamnt
atggcggcgttgaaggaggagcagtgctacggattgtcctgtggacgagtgagcaatggc
agtaatgtctccgtctttcacgtaaaactcactgacagcgccttgaaagcatttgaaggt
tatcagagcagcaagggcctgtcttcacaaccgctgatacgatttactggaagccaaggg
aaaatctcaataccgtggtcggaaaatccgaatgagctgcgactgtttactttctacttg
tccaatgtgggtagagacaacccacagggcagctttgactgcatccagcagtacatcacc
agtgaggggagcattcagctggactgcctgggtggaatccaggacaagatcacggtgtgt
gccacggacgactcttaccagaaggccaggcaaagcatggctcaggcagaggaggagacc
cgcagcaggggtgcgatcgtcatcaagcctggggggagatacgtgggtaagaaggtgcag
atccggaaaccggcacctgggctgtctgacatcgctccatcgcggcggacgtcgcggcct
gtcatcatctctagcagtgcggcgaagaagagcacggcgcagcagaggcccctgagggag
cgcctcacccacctgctggccctcaagccttacagaaagcctgagctcatcctgcgcctg
cagaaggatggcctcttgccctttgacaaggactctctggacagcctcctgcaacaggtg
gctaacctaaatgtgagagacaacaccttcacattgaaggactctttgttcaaggacatc
cagaaggactggccaggctacactgagggagaccagcaacttctgaagaggatccttgtt
cggaaaatgtgtcagactccaagcaccaccacagtggctcctccagctgaggtcccactc
ccagtgagccctcccaaagagctggctagcagctccccatcgcagaaacgacctgctgca
gatttcatcgatcctctggccaacaaaaagcccaggatatcacacatggctaacaaaaca
gcggtgccaataaatggcaagcagagttcatccaatggaaaggaggggagtggggcagtg
gttgtggcgccagcggttgaaggcgtgacgtccagctcccagctccccctacttgacatc
caccggcccttcgacccactctccgacgttagtaacgactccagccacaatggccgagac
tgtgagggccaagaggccgctgtagcagagagactgagccagccaccagtcttctctggg
cccgcagtgctgtccgtaccaaccctgggcctctcgtccctcggacacaccggccttgat
gggccccagagcaagagcaccttgccctccctgcatggcaagtccaagaagaagtccaaa
aaacacaaagacaaggaaaagtccaaagagagggaagggagagggagagagaaggagagg
aaaggagcagaggagcgtgttcctgagccaagaaaagcctgtgacatcacctccagccct
gagaacctgaagagcagtagtattccacacagcagcacagatctcaatggaatgtgcaac
aacaccagtgttccttcgtcatcgactgagatggcagactatttattggagtatacagtg
attggctcttccgagcagcgtcaaacatacaagaattactttaatactgagtatagtgag
taccggggcctccacgctcggatagagggcatcacccggcagttcactgtgctcgacact
gagcttaagcagctccaacaaggcacagacaagtacaagacaatccacaaccagatactc
caagagtatcgtaaaataaaaaagactaatccaaactatagccaagagaagaaccgctgt
gaatatctacacagcaaactgtcacatataaagaaacttatagcaaagtatgatcaacag
caacttcaaaactggactggttga

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