Oncorhynchus nerka (sockeye salmon): 115108344
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Entry
115108344 CDS
T07952
Name
(RefSeq) AP-3 complex subunit delta-1-like isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
one00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
115108344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
one04131
]
115108344
Membrane trafficking [BR:
one04131
]
Endosome - Lysosome transport
Others
AP-3 complex
115108344
Endosome - Golgi transport
115108344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
PDS5
RasGEF_N_2
TOR1L1_N
TPR_Trm732_C
CEP104-like_TOG
Vac14_Fab1_bd
Motif
Other DBs
NCBI-GeneID:
115108344
NCBI-ProteinID:
XP_029488411
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Position
LG24:complement(44350856..44382522)
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AA seq
1263 aa
AA seq
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MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISTCIDEIKQELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTYKRIGYLAASQCFHESTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNCEPSVNACMKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDK
DESIRLRALDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYI
TNFEWYISILVELTRLEGTRHGHLIASQMLDVAIRVKAIRAFAVAQMATLLDNAHLLTGN
TQRNGICEVLYAAAWICGEFSEHLEEPMATLEAMLRPKVATLPGHIQAVYVQNAAKLFAT
VLRGQEGVPADSTVAQETSQLLIDRLPLFVQSSNLEVQERASCILQLVKYIQKLQQKDVE
VAEEVTALFAGELNPVAPKAQKKVPVPEGLDLDVWINEPPSGSESEDEGRKSKGKAVFAK
EESRHTKPRYTEVDEKELAKRREVRKAEQANNPFYIKASPSSQKVYQDGVGVEHIPVVQI
DLSVPLKVPGMPMSDQYVKLEEERRERNKADKKKKKDKKKREKGEKGRRRRGDSGPESEE
DITPAHMVDIVTEEMPENALPSDDDDKDPNDPHKALNIDLDNLLAASRRPLADSEKKLPV
RSHRPDEVLKSPMEDRQVVEVVPEPKKKTGKEKKDRKKSKEKKKKHKQEEEGDLMGAGSE
EPVQPEETKEVAAPPPASTPEASDLDFWLSNAPVPSNPQAAAAPASTPRTASGMAAVAPD
SEPEEAKDTEPEETKSSTHKKKKQKKEKEKKKKKHHHNHSDGAGDESVQNGTVEEEEPLP
PMSNYALLAENSYIKMMKQDADKVCDIQGNLQDGSQVVVSVIFENKCDSFIKSMEFNVLD
SLNSKLQRPDGAGPHDGLIVPFQLPPGISNEARFIFSVQNIVMPQKLKGTLTFIVKTDDS
STHEKLDFKLHFTCTSYLITTPCYSDAYSKLLESGDLKGCSLKLEGVNQPFHHLLARICF
HHHFSVVERIDSCASMYSRSIQGHHMCLLVKTADQTVSIDAKCDEPGLLGNVLDEIKLTF
SQC
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagattgttaaagggagcatcgatcggatgttcgataaaaaccttcaagat
ttagtacgtggaattaggaatcacaaggaagatgaggctaagtacatctccacctgcatt
gatgagatcaagcaggagctcaagcaggacaacattgctgtcaaggccaatgctgtgtgc
aaactcacctacttacagatgctgggctatgatgtcagctgggctgcattcaacatcgtg
gaagtcatgagttcctcaaaattcacatacaagagaattggttacctggctgcctcccag
tgctttcatgagagcactgatgtcatcatgctgacaaccaatcagatccgaaaggatctg
agcagtcctaaccagtacgacactggcgtggctctcactggcctctcctgcttcgtgacc
cctgacctggctcgggacctggccaatgacatcatgactcttatgtcccacacaaagccg
tacatcaggaagaaggccgtacttatcatgtacaaggtgttcctgaagtacccagagtct
ctgcgccctgctttccccaggctgaaggagaaactggaagaccctgaccctggggtccag
tcagcggctgttaatgtcatctgtgagctggccaggagaaaccccaagaactacctgtct
cttgccccgctcttcttcaagctcatgacctcctccaccaacaattgggtcctcatcaag
atcatcaagctgtttggtgccctcacacccctggagcctcgcttggggaagaagctgatt
gagcccctaacaaacctcatccacagtacctcggctatgtcacttctatatgaatgtgtc
aacactgtaatagcagtgttgatttccctgtcctccgggatgccaaatcacagtgctagt
attcagctctgtgtccagaaactgcgaatcctgattgaagactcggaccagaactgtgag
ccctctgtcaatgcctgcatgaagtacctgggcctgctggccatgtccaagatactgaag
actcatcccaagtctgtccagtcccacaaggacctcatcttgcagtgtctggatgacaag
gacgagtccatccgcctgagggctctagacctgctctacggcatggtgtccaagaagaac
ttgatggagatagtgaagaagctgatgttgcacgtcgacaaggctgagggaaccacttac
cgagatgagctgctcaccaagatcatcgacatctgcagccagagcaattaccagtacatc
accaactttgaatggtacatcagtatcctggtggagctgacccgtctggagggcacgcgg
catggccacctcattgcctcccagatgctggacgtggccattcgggtcaaggccatccga
gcctttgctgtggcccagatggctactctactggacaacgcccacctgcttaccggcaac
acacagcgcaacggcatctgtgaggttctctatgccgccgcctggatctgcggagagttc
tcagaacacctggaggaacccatggcaacactggaggccatgctgcggcccaaggtggcc
accctgccgggccacatccaggccgtgtacgtgcagaacgctgccaagctgtttgccacg
gtgttgcgcggccaggagggggtgccagcggacagcacggtagcccaggagaccagccag
ctgctcattgacaggctgcctctttttgtccagagttccaacctggaggtgcaggagagg
gcctcctgcatcctgcagctggtgaagtacatccagaagctgcagcagaaggacgtagag
gtggctgaggaggtgactgctctgtttgctggggagctcaaccctgtggcccccaaggca
cagaagaaagtacctgttcctgaaggtctggacctggatgtgtggatcaacgagcctccg
tctgggagtgagtctgaagacgagggcaggaagtccaagggcaaggctgtgtttgccaag
gaggagtccagacacaccaagccacgctacactgaggtggacgagaaggaactggccaag
aggagagaagtaaggaaggcagagcaggccaacaacccattctacatcaaggcctccccc
tcctctcagaaggtgtaccaggatggtgttggtgtggagcacattccagtggtgcagatt
gacctcagtgtgcctcttaaggtcccagggatgccaatgtcagatcagtatgtgaagctg
gaagaggagcgtcgggagagaaacaaggcagacaagaagaagaagaaggacaagaagaag
agggagaagggcgagaagggccgccggagaaggggggactctggccccgagagcgaggag
gacatcacccccgcacacatggtggacatcgtcactgaggagatgccagagaatgcctta
cccagtgatgacgacgacaaagatcccaacgacccccacaaagctctgaacatcgacctg
gacaatttgctggcagcatctcgcaggcccctggcagacagcgagaagaaactgccagtc
aggtcacaccgtcccgacgaggtcctcaagagccccatggaagacaggcaggtggtggag
gttgtaccagagcccaagaaaaagacaggaaaggagaagaaggacaggaagaagagtaaa
gagaaaaagaaaaagcacaaacaagaggaagagggggatcttatgggcgctgggtcagag
gagcctgtccaaccagaagagaccaaggaggtggcagccccgcctcctgcctctacacca
gaggcttcggatctggatttctggctctcaaatgctccagtgccctctaaccctcaggca
gcagctgcccctgcctccacccctaggacggcatctggtatggctgccgtggcaccagac
tctgagcctgaagaggccaaagacactgagccggaggagactaaatcctccacgcacaag
aagaagaagcagaaaaaggagaaggagaagaagaaaaagaagcaccaccataatcatagc
gatggggccggagacgagtctgtgcagaacggcactgtggaggaggaggagcctctgccg
cccatgtccaattacgccctgctggctgagaactcctacatcaagatgatgaagcaggat
gctgataaggtgtgtgacatccaggggaatctgcaggacgggagccaggtagtggtctct
gtcatctttgagaataagtgcgacagctttatcaagtccatggagttcaacgtgctggac
tctctcaactccaagctgcagcggcctgatggagctggcccacacgacggcctcatcgtg
cccttccaactgccccccgggatatcaaacgaggcacgcttcatcttctcagtgcagaac
atcgtgatgccccagaaactgaagggaaccctcaccttcatagtcaagactgatgattcc
tccactcacgagaaactggactttaaactgcactttacctgcacctcctacctgatcact
actccctgctacagtgatgcgtattctaagctgttggagtcaggggacctgaaggggtgc
tctctgaagctggagggagttaatcagcccttccaccatctactggccagaatctgcttc
caccaccacttctctgttgtggaaaggatcgattcctgtgcctccatgtacagcaggtca
atccagggtcaccatatgtgtctgctggtcaaaactgctgatcagaccgtgtccatcgac
gctaaatgtgacgagccggggctgcttgggaatgtgctggatgagatcaaactcaccttt
tctcagtgctga
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