Oncorhynchus nerka (sockeye salmon): 115108357
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Entry
115108357 CDS
T07952
Name
(RefSeq) semaphorin-6B-like isoform X1
KO
K06842
semaphorin 6
Organism
one
Oncorhynchus nerka (sockeye salmon)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
115108357
NCBI-ProteinID:
XP_029488440
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Position
LG24:complement(44563412..44716051)
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AA seq
856 aa
AA seq
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MSTLAPPFFLLFWLLRLASTAFPEEPGPLNFISIEVVHRYPVFLGRPHRSSLRQEPLHIQ
RVLKVNRTLYIGARDDLFRVELDNVAGDEMFYSKKRTWESNKNDIRTCRMKGKHEDECRN
FMKVLLSRQGGLFVCGTNAFNPLCANYTGDTLEMVGETVSGMARCPYDPKHANVALFAEG
NLFTATVTDFLAIDAVIYRSLGDSPALRTVKHDSKWFREPYFVSSVEWGPHIYFFFREMA
MEFNYLEKVQVSRVSRVCKGDLGGSQRVLEKQWTSFLKARLNCSVPGDSHFYFNLLHSTS
PVIRMHGRDIILGVFSTPANSIPGSAVCAFDMEQLAGVFDGRFKEQKSPESIWTPVPDEL
VPKPRPGGCAVQGSRFNSSNGFPDEMLNFVKTHPLMDEAVPSLGQRPWIVRTMVRYQLNK
MVMDTEAGPYRNRTVLFLGSSRGTILKFLIVPNRDNTVSSSNVFLEELEGFIPDKCGEDS
PQARQLLSLTLDSVSQSLLLAFPSCVVRVPVARCQLYSRCMKNCIASRDPYCGWTRGSTC
SFLRPGTRLPFEQDIEHGNVSHLGDCDGLLQESFIDEPDGLVSVNLLVVSAVSAFATGAV
LSGLAVCWIMSHRHRTRGAGANRSRKGDKEQNMLGQGRSGSVMSVTRTSGSERPRSHSQA
DNPFIMPNGWPKGEMDPGLPTPEQTPLQQKRPPPSMRDVDWEQSQTFLTSVGMPCPANSV
IYLSSKFLQERGGRHEGPGDVGPPNTERTRYLVLASNREPHGGQPRTTLRNSAGEYNYPA
TPQDSPDRRRVVSAPSTQMDFGEPPRWTHEGLNYNSNNGAPYPSQRPGLIRANHHGLADF
SHLMGKSVGEPTPSGQ
NT seq
2571 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaccctggcaccacccttcttcctgctgttctggctcctccgattggccagcact
gcgtttccggaggaaccggggcctctgaactttatctccattgaagtggttcaccggtac
ccagtgtttctgggtcggccacatcgttcatccctgagacaggagccactgcatattcag
agagtcctcaaggtgaaccggaccctctacattggagccagagatgaccttttccgcgtg
gagctggacaatgtggcgggagacgagatgttctacagtaagaagagaacatgggagtcc
aacaaaaatgacatcaggacctgccgaatgaagggcaagcacgaggacgagtgtcggaac
ttcatgaaggttttgctgagtcgacaaggaggtctgtttgtatgtgggaccaatgccttc
aatccgctgtgtgccaactatactggagacactctggagatggtgggagagacagtcagt
gggatggcccgctgtccctatgatcctaaacacgccaacgtggctctgttcgcagagggg
aatctgtttacggccactgtgacggacttcctggcgatagacgctgtgatctaccgtagc
ctgggggacagtcctgcactccgcacagtcaaacacgactccaaatggttcagagagccc
tattttgtcagttcagtggaatggggtcctcacatctacttcttcttcagagagatggcc
atggagtttaactatctggagaaggtacaggtgtctcgggtgtctcgggtgtgtaagggg
gacctgggtggttctcagagggtgttggagaagcagtggacgtcgttcctgaaggccaga
ctgaactgctccgtccctggagactcccacttctacttcaatctgctccactccaccagc
cctgtcatcaggatgcacggcagggacatcatcctgggagtcttctccacccccgccaac
agcatccctggttcggctgtgtgtgcgttcgacatggagcagctggctggggtgtttgat
gggagattcaaggagcagaaatcacctgagtctatatggacccctgttcctgatgagctc
gttcccaaaccaaggccagggggctgtgctgttcagggctccaggttcaactcatccaat
ggtttccctgatgagatgctgaactttgtgaagacccaccccctgatggatgaggccgtg
ccctcactgggacagaggccctggatcgtcaggaccatggtcaggtaccagctgaataag
atggtgatggacacggaggctggcccctacagaaaccgcacagtgctcttcctgggctcc
agccgggggaccatcctcaagttcctgatcgtccccaaccgggacaacaccgtgtccagc
agcaatgtcttcctggaggagctggagggcttcatccctgacaagtgtggggaggactct
ccgcaggcgaggcagttgttgtccctgactctggactcggtgagccagtctctgctgctg
gccttcccctcttgtgtggtcagggtccctgtggcacgatgccagctctactcacgctgc
atgaagaactgcattgcctccagggacccctactgtggctggaccagaggaagcacctgc
tccttcctcaggcccgggaccagactgccgttcgagcaggacatagaacacgggaacgtg
tcccacttgggcgactgtgatggtctcctgcaggagtctttcattgacgagccagatggt
ctggtgtcagtcaacctgctggttgtgtctgcagtctcagctttcgccacgggggcggta
ctgtcgggcttggctgtctgctggatcatgagtcatcgccaccgcacacgaggggcagga
gccaacaggagccgtaaaggggacaaggagcagaacatgctgggtcagggccggagcggc
tcagtgatgagcgtgacacgtaccagtggcagcgagagaccccggtcacattctcaggca
gacaacccgttcataatgcccaacggctggcctaaaggagagatggacccaggcctacct
actccagaacagacccccctgcagcagaaaaggcctccacccagcatgagagatgtagac
tgggaacagagccagaccttcctcacctcagtgggcatgccctgcccagccaactccgtc
atctacctgagctccaagttcctgcaggagagaggtggtaggcacgagggcccaggggat
gtggggccccccaacacagagcgaacacgttacctggtcctcgccagcaaccgggagcca
catgggggacaacccaggaccaccctgaggaactctgcaggtgaatacaactacccagcc
acgccacaggactccccagaccgcaggagggtggtctcagcccccagcacccagatggac
tttggggagcctccccgctggactcacgagggactcaactataacagcaataacggagcg
ccctacccctcccagcgcccgggcctgatccgggccaaccaccacggccttgccgacttc
agtcacctaatgggaaagagcgtgggcgagcctacccctagtggccagtga
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