Oncorhynchus nerka (sockeye salmon): 115108364
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Entry
115108364 CDS
T07952
Name
(RefSeq) procollagen galactosyltransferase 2-like
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Pathway
one00310
Lysine degradation
one00514
Other types of O-glycan biosynthesis
one01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
one00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
115108364
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
115108364
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
one01003
]
115108364
Enzymes [BR:
one01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
115108364
Glycosyltransferases [BR:
one01003
]
O-Glycan biosynthesis
O-linked Gal type
115108364
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
115108364
NCBI-ProteinID:
XP_029488454
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Position
LG24:complement(44832940..44875672)
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AA seq
618 aa
AA seq
DB search
MMPAVGAVGVGLLCALLVALMPGGMSDLVTLVQDSVRPESSLLMPKVMIAILARNAAHSL
PHYLGCIDRLDYPKERIAIWAATDHSVDNSTAMLREWLKQAQDQYHYVEWRPMEEPKSYT
DEWGPKHWPPSRFNHVMKLRQAALKAARERWADYILFADGDNLLTNPKILNLLMAENLTL
VAPMLESRSLYSNFWCGITPQGYYKRTPDYQPIREWKRLGCFAVPMVHSTFLLDLRRGAS
RELAFYPPHPDYSWAFDDIMVFSFSARQADVQMYVCNREHYGFLPVPLKASQNVDDEKES
FTHTIAEAMIDHNIAPSEYMYNPEMPQDKMGFDEIFLINLKRRLDRRQRMLSTMTSLGLQ
ATITDAVDGKALNSSQLQALGIEMIPGYQDPYSGRVLTRGEIGCFLSHHSTWVQMAERGL
SKVLVLEDDVRFEPRFKRRMMTIIEEVEKTQLDWDLIYVGRKRMQVHQPERSVEGVNNLV
EADYSYWTLGYALSAQGARKLLAAQAFSKMLPVDEFLPVMFNKHPNSDFMSHFEPRDLKA
FSVEPLLLYPTHYTGEPGYVSDTETSTIWDDEATATDWDRLHQHARKTEQQGRIHTVAQN
SVTGDSPPPAARSTRDEL
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgatgccggcggttggagccgtgggagtcggactgctctgcgcgctgcttgtcgccctc
atgccgggtggcatgtcggacttggtgactctggtgcaggactcggtccgacccgaatcg
tcactgctgatgccaaaagtcatgatcgccattctggctcgcaacgcagcgcacagcctg
ccgcactacctgggctgcatcgacaggctagactatccgaaggagcggatagctatctgg
gcagcgacagaccacagtgtggacaacagcacagccatgctgagggagtggctgaagcag
gctcaggaccagtaccactatgtggagtggagacctatggaggagcccaagtcctatact
gatgagtgggggcccaagcactggcctccgtcccgcttcaaccatgtgatgaaactgagg
caggctgctcttaaggcagcacgggaacgctgggcagattacatactgtttgcagacggt
gataacctgctgaccaacccaaagattctcaacctgctcatggctgagaacctgactctg
gtagctcccatgctagagtcacgctctctctactctaacttctggtgtggcatcacccca
cagggttactacaaacgtacccctgactaccagccaatcagggagtggaagcgtctgggt
tgcttcgctgtacccatggtgcactctaccttcctgctggacctgaggcgtggcgccagc
agggagctggccttctacccccctcaccctgactacagctgggccttcgatgacatcatg
gtgttctccttctctgcccggcaggcagatgtgcagatgtacgtgtgtaacagagagcac
tatggcttcctaccggttcctctgaaggcctcgcagaatgttgacgatgagaaggagagc
ttcacacacaccatcgctgaggccatgattgatcacaacatagcaccctcagagtacatg
tacaatcctgagatgccgcaggacaagatgggctttgatgagatattcctgattaatctg
aaacgtcgtctggacaggagacagaggatgttgagcaccatgacctctctgggtctgcag
gccaccatcactgacgcagtggacggcaaggctctgaactcttctcagctgcaggcattg
ggtatagagatgattccaggttatcaggacccgtactctggccgtgttctaaccagagga
gagataggctgcttcctcagccaccactccacctgggtacagatggcggagcgtggtctt
tccaaggtgctagtgctggaggatgatgtgcgctttgagcccaggtttaagaggcgaatg
atgaccatcatagaggaagtagagaagacccagctggactgggatctcatctatgttggg
cgtaagcgtatgcaggtgcaccaaccggagcgttcagtggaaggggttaataacctggtg
gaggctgactactcttattggacgctgggctatgccctgtcagcgcagggtgccaggaag
ctgctggctgctcaggccttcagcaagatgctacctgtcgatgagttcctccctgtcatg
ttcaacaaacaccccaattctgacttcatgtctcactttgagcctcgggacctgaaggcc
ttctctgtggagcccctcctcctgtaccccacccactacacgggcgagccgggctacgtg
agtgacacggagacctccaccatctgggacgacgaggccaccgccaccgactgggaccgc
ctgcaccagcatgccaggaagacagagcagcaaggccgcatccacaccgtggctcagaac
agtgtgacgggtgactcacctccgcctgccgcccgctccacacgtgatgaactctga
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