Oncorhynchus nerka (sockeye salmon): 115108376
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Entry
115108376 CDS
T07952
Symbol
rfx2
Name
(RefSeq) DNA-binding protein RFX2 isoform X1
KO
K09173
regulatory factor X 1/2/3
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
one03000
]
115108376 (rfx2)
Transcription factors [BR:
one03000
]
Eukaryotic type
Other basic domains
RF-X
115108376 (rfx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BCD_RFX
RFX1_trans_act
RFX_DNA_binding
ThermoDBP-RP_arch
Pox_D5
Motif
Other DBs
NCBI-GeneID:
115108376
NCBI-ProteinID:
XP_029488485
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Position
LG24:complement(45305085..45370625)
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AA seq
730 aa
AA seq
DB search
MQSSEGGSDSSSSVALRTSTSAQAPVVQPVPASQQRVLVQATGSAQKGAQVQQLSVPRLQ
QVPQQVQQIHHVYPSQVQYVGEGGEAVYTNGTIRTAYSYNPEAQLYGQGSGGAYFDSQGG
GSQVTTVVSSSSGVPPHGMVGITMDVGGSQIISGGSTYLIHGGGMEGGRHHASHSSRSSS
AMLEMAIENLQKSEGIATHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQK
LDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKYHYYGIRLKPDSPLNRLQEDSQYMAMRQ
QPVHQKQRFKPLQKVDGMGDSLSGGSQHSASTPEQSVAAQSQHHQQYIDVSHVLPPFPIP
DLGTQPLPERINMNDVKKLQNLYRDHCEATLDVVMNLQFHYIEKLWQTFWFSTAPSSDGT
TTIPNSDEDMEGVIPRQKLIALCKYEPVKLWMRSCDHILYQALVEILIPDVLRPVPSTLT
QAIRNFAKSLEGWLTTAMSDFPNEIVRTKAAVVSAFAQTLRRYTSLNHLAQAARAVLQNT
SQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLEQDFKVTLQQQSSLDQWAAWLDNV
VNQVLKPHEGSPSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFY
LVEHRVAQATGETPIAVMGEFSDLNSMMLMDKDPSFSDDMSDIGSDEGRGPNEPAVKRER
IEINHSLQEI
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgcagagttcagagggagggtccgattcgtcgtccagtgtggcgctgcgtacgtccacc
tccgcccaagcccccgtggtgcagcctgtcccagcctcacaacagagggtgctggttcag
gccacaggctctgcacagaagggagcgcaggtgcagcagctgtcagtcccccggctgcaa
caggtccctcagcaggtccagcagatccatcatgtctacccctcccaggttcaatatgtg
ggagaggggggagaagcagtttacactaatggaaccatccggacagcctactcctataac
cctgaggcccagctgtatggccagggcagtggaggagcctattttgactctcagggcggg
ggttcccaggtcacgacggtggtctcctcctccagtggtgtgccgccccacggcatggtg
ggcatcaccatggatgtgggcggcagtcagatcatctcaggtggcagcacctacctgatc
cacggcgggggcatggagggaggccgccaccacgcctcacactcctcccgctcctcctcc
gctatgcttgaaatggcgattgaaaacctccaaaagtcggaagggattgcaactcacaaa
agcagcctgctcaacagccatctgcagtggctgctggataactatgagacagcagagggg
gtgagcctgccccggagctccctctacaatcactacctgcgccactgtcaggagcagaaa
ctggacccggtcaacgctgcctcctttgggaaactcatccgctcagtcttcatgggcctc
aggacccgccgcctcggcacaagaggcaactccaaataccactactatggcattagactg
aagccagactccccactcaacagactgcaagaggactctcagtacatggccatgagacag
cagcctgtgcaccagaaacaaaggttcaagcccctccagaaggtggatggcatgggggac
agcctgtcaggaggctcccagcattcagccagcaccccagagcagtctgtggcagcccag
agccagcaccaccagcagtacattgatgtgtcccatgtcctgcctccgttccccatccct
gacctgggcacccagcccctccctgaacgcatcaacatgaacgacgtgaagaagttgcag
aacctgtacagggaccactgtgaggctactctggacgtggtgatgaacctccagttccac
tacattgagaagttgtggcagaccttctggttttcaacagcgccatctagtgacggaacc
accaccatccccaacagtgatgaggatatggagggggtgatccccaggcagaagctgatt
gctctgtgcaagtatgagcctgtcaagctgtggatgaggagctgtgaccacatcttgtac
caggccttggtggagatcctcatccctgacgtgctgcgccctgtccccagcactctcact
caggccatccgcaactttgccaagagtctggagggctggctgaccacagctatgagcgac
tttcccaatgagattgtccgcaccaaggcagcggtggtgagtgcatttgctcagaccctg
cgtcggtacacctctctgaaccacctggcccaggcggcccgcgccgtgctgcagaacacc
tctcagattaaccagatgctcagcgacctcaatcgtgtcgacttcgccaacgtacaggag
caggcgtcgtgggtgtgtcagtgtgacgagagcgtggtccagcggctggagcaggacttc
aaggtgaccctgcagcagcagagctctctggaccagtgggccgcctggctcgacaacgtg
gtcaaccaggtccttaagccccacgaaggtagccccagctttcccagggccgcacgacag
ttcctgctcaagtggtccttctacagctccatggtaatcagggacctgaccctgcgtagt
gctgctagtttcggctccttccacctcatcagactgctctatgatgagtacatgttctac
ctggtggagcaccgcgtcgcccaggcaaccggagagactcccatcgctgtcatgggagag
ttcagtgaccttaactcgatgatgctcatggacaaagacccgtccttctcagatgacatg
agtgacataggcagtgacgagggccgagggcccaacgagccggccgtgaaaagagagagg
atcgaaatcaaccactcgctgcaggaaatctga
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