Oncorhynchus nerka (sockeye salmon): 115108381
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Entry
115108381 CDS
T07952
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 10-like isoform X1
KO
K08625
a disintegrin and metalloproteinase with thrombospondin motifs 10 [EC:3.4.24.-]
Organism
one
Oncorhynchus nerka (sockeye salmon)
Brite
KEGG Orthology (KO) [BR:
one00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
one01002
]
115108381
Peptidases and inhibitors [BR:
one01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
115108381
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
Pep_M12B_propep
TSP_1
ADAMTS_CR_2
Reprolysin_5
Reprolysin_3
ADAMTS_CR_3
PLAC
Reprolysin_2
TSP1_spondin
TSP1_CCN
Reprolysin_4
DUF4953
Peptidase_M57
Motif
Other DBs
NCBI-GeneID:
115108381
NCBI-ProteinID:
XP_029488494
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Position
LG24:complement(45482429..45539879)
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AA seq
1121 aa
AA seq
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METVWRILACIVVIIVMVATEVAESQTAEKFTQSHATFLSSLGQYEIAIPVRVGPQGETL
HTGDVGADSPNHHRRSHRSAEDQQQDLSQLYYQLSTPTTNFLLNLTLQGGLLSRQFRVEY
WRRGRLAWSHPYALQCLYVGHLQDQPHSSKVALSNCNGLQGVIVAGGEEYIIEPLTPPEN
LTRAERGESRPHVVYKRSSLRHQYMDQSCGVIDEKPGKGMAWWQRTLKTPPNPIGRGQLP
LKRSVSRERYVETLVVADKMMVGYHGRRDIEQYILAVMNIVAKLFQDSSLGNAVNIVVTR
LILLMEDQPTLEINHHAGKSLDSFCKWQKSIQNRNGNGNAIPDNGIAHHDTAVLITRYDI
CIYKNKPCGTLGLAPVGGMCEPERSCSINEDIGLATAFTIAHEIGHTFGMNHDGVSNGCG
SRSQETAKLMAAHITMKTNPFVWSACSRDYITNFLDSGMGSCLNNVPPKQEFVYPTTAPG
QAYDADEQCRFQYGVKSRQCKYGEVCSELWCMSKSNRCITSSIPAAEGTICQTNTIEKGW
CYKRVCVAYGTRPEGVDGGWGLWTPWEECSRTCGGGVSSSIRHCDSPRPTIGGKYCLGER
KRFRSCNIDECPAGSQDFREIQCADFDNVPFRGKFYTWQPYRGGAYSGVKSCSLNCLAEG
YNFYTERAPAVVDGTPCRDDSLDVCVNGECKHVGCDRILGSDVREDRCRICGGDGSNCEA
IEGVFNDSLPEGGYEEVVRIPKGSTFIHIQELNISLNYLVLKSKGDQYFINGKLTIDPPR
RFDITGTTFHYRRPTDEPETLEALGPTNMTLIVMVLVRDENPGIHYRFNPPVNRDPLTGY
AWHYTSWSRCSALCAGGAQIQQVVCKKQADHSVVYNHFCDKKSKPKDKKRGCNSEPCSPS
WGSGEWSECSRSCNGGLRTREVLCKRKISPTEEKVQDDGACTPPGPPLTEPCNNHTCPPE
WLALNWSECNPSCGPGFRHRVLLCKRGESGGTLPESQCPKYGRPTTRVRCNLQRCPPPMW
VTGPWGECSANCGLGQEMRSVQCLVHTGQPSNECPDLLRPAAMQQCKSKCDLSSLPMDIP
EGDPEECKDVNTVAYCPLVLRFKFCSRPYFRQMCCKTCQGH
NT seq
3366 nt
NT seq
+upstream
nt +downstream
nt
atggaaacagtatggaggatcttggcctgcattgttgtcatcatcgtcatggttgccacc
gaggtcgcagaaagtcagactgctgaaaagttcactcagtcacacgctacgttcctgtct
agcctgggccagtatgagattgccatcccggttcgcgtggggccgcagggcgagaccctg
cacacaggggatgtgggtgcagacagccccaaccaccaccggcggagccaccgtagtgct
gaggaccagcaacaggacctgtcccagctgtactaccagctctctacccccacaaccaac
tttctcctcaacctgaccctgcaggggggcctgctgtcccgtcagttccgtgtagagtac
tggaggagggggcgtctggcctggagccacccttacgcccttcagtgtctctatgtaggc
catctgcaggatcagccccactctagcaaggtggccctcagcaactgtaatggcctgcag
ggggtgatcgtggcagggggtgaggagtatatcatcgagcctctgaccccgcccgaaaac
ctcacgagggcggagaggggggagagccgcccccatgtggtctacaagaggtcatctctt
cgccaccagtacatggaccaatcctgtggggtcatcgatgagaagccagggaaaggtatg
gcctggtggcagaggactctgaagacacctcccaaccccattggccgaggccagctgccc
ctgaagaggtctgtgagcagagagcgctacgtagaaacactggtggtggccgacaagatg
atggtggggtaccacggccgccgggacatcgagcagtacatcctggctgtcatgaatatt
gttgccaaactgttccaggattctagcctggggaacgcagtgaacatcgtggtgacccgt
ctcatcctgctcatggaggaccagccgactctagagatcaaccaccatgcagggaagtcc
ctggacagcttctgtaagtggcagaaatccatccagaaccggaatggcaacgggaacgcc
atcccagacaacggtattgctcaccacgacactgccgtgctcatcaccaggtacgacatc
tgcatctacaagaacaagccatgtggaaccctaggtctagctccagtgggggggatgtgt
gagccagagaggagctgcagtatcaacgaggatatcgggctagccacagctttcaccatc
gcccacgagataggacacacgtttgggatgaaccacgacggagtgagcaacggctgtggc
tcccgcagtcaggagacagccaagctgatggctgcacacatcaccatgaagaccaacccc
ttcgtctggtcggcctgcagccgagactacatcaccaacttcctggactcaggtatgggt
tcatgcctcaacaacgtcccaccgaagcaggagtttgtgtaccccaccacggcccccggc
caggcctacgatgcagacgagcagtgccgcttccagtacggagtgaagtctcggcagtgt
aaatacggggaagtctgcagtgagctgtggtgcatgagcaagagcaaccgctgcatcacc
agcagcatacccgctgcagaaggaaccatctgtcaaaccaataccatagagaaagggtgg
tgctataagagggtgtgtgtggcctacgggacccggccagagggcgtggacggcgggtgg
ggtctctggaccccctgggaggagtgcagccgtacctgtgggggaggagtgtcctcctcc
atccgccactgtgacagccccaggccaacgattggtggaaagtattgtctgggagagagg
aagcgcttcagatcgtgcaatattgatgagtgtcctgcaggctctcaggatttccgggag
attcagtgcgccgatttcgacaacgttcctttccgggggaaattctacacctggcaaccc
tacagaggaggtgcgtacagtggagtgaagtcctgctctctgaactgcctggcggaggga
tataacttctacacagagcgtgctccggctgtggtggacgggaccccatgtcgggacgac
tctctggatgtctgtgtgaatggagagtgcaagcacgtgggctgtgaccggatcctgggc
tcggatgtacgggaggaccgctgccgtatctgcgggggtgacgggagcaactgtgaggcc
atagagggcgtcttcaatgactccttgcctgaaggaggttatgaagaggtggtcagaatc
cccaaaggatctaccttcattcatattcaggagctcaacatctccctcaactacctagtg
ctgaagagtaaaggggaccagtacttcatcaatgggaagctgaccatcgacccccctcgt
aggttcgacatcacagggaccaccttccactaccgccgacccactgatgagcctgagacc
ctggaggccctggggcccaccaacatgaccctcatcgtcatggtgctggtgagggacgag
aacccagggatccactaccgcttcaaccctccagtcaacagagaccctctgactggatac
gcctggcactacacatcctggtcccgctgctccgcactctgcgctgggggtgctcagatc
cagcaggttgtgtgtaagaagcaagctgatcactccgtggtctacaaccacttctgtgac
aagaagagcaaacccaaagacaagaagcgaggctgcaactctgagccatgctccccaagc
tgggggtctggggagtggtctgagtgcagtcgcagctgtaacgggggcctgaggaccaga
gaggtgctgtgtaagaggaagatctctcctacagaggagaaggtgcaggacgacggtgcc
tgtacccccccaggaccacccctcactgagccctgcaacaaccacacctgccccccagag
tggctggccctgaactggtcagagtgtaatcccagctgtggtccagggttcaggcaccgt
gtccttctgtgtaagaggggggagagtggaggcacactgccagagtcccagtgtcccaag
tatgggcgtcccaccaccagggtgcgctgtaacctgcagcgctgcccaccccccatgtgg
gtcacagggccctggggagagtgctcagccaattgtggtctgggtcaggagatgcgctct
gtgcagtgtcttgtacacaccggccagccgtccaatgagtgcccagacctcctgcgcccg
gcagccatgcagcagtgcaagagcaaatgtgacctcagcagcctacccatggacatccct
gagggtgaccctgaagagtgtaaagatgtgaacacagtggcgtactgccccctagtgctc
aggtttaagttctgcagccgcccctacttcagacagatgtgctgtaagacctgccaagga
cactga
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integrated database retrieval system
